BLASTX nr result

ID: Panax21_contig00020355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020355
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis ...   176   3e-42
emb|CAN77008.1| hypothetical protein VITISV_036876 [Vitis vinifera]   176   3e-42
ref|XP_002526027.1| Prolactin regulatory element-binding protein...   173   2e-41
ref|XP_002312443.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|XP_002314804.1| predicted protein [Populus trichocarpa] gi|2...   156   3e-36

>ref|XP_002284414.2| PREDICTED: SEC12-like protein 2-like [Vitis vinifera]
          Length = 394

 Score =  176 bits (446), Expect = 3e-42
 Identities = 93/166 (56%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
 Frame = -3

Query: 478 PNSKSYGVPLYGASWLPLNLTRS--QTNSSQDDADE-----SPQSIDAXXXXXXXXXXXX 320
           PN K YGVPLYGA+W P  +     Q    + +ADE     S  S  A            
Sbjct: 10  PNYKKYGVPLYGAAWAPSTIINDAPQPLDQKQEADEVSGEGSTPSPAAPTYLVFCGGGGE 69

Query: 319 XXXGIPNALLVSHFDITSNSLSDQPVAKLGTGVDLPYRIAVHPGGEGLVCSMPKSCRWFE 140
              GIPNALL++ FD  SNSLSD PV KLG G DLPYR+AVHPGGEGL+CS+PKSC+WF+
Sbjct: 70  GRSGIPNALLLAEFDFASNSLSDMPVFKLGIGADLPYRMAVHPGGEGLICSLPKSCKWFQ 129

Query: 139 WDAAERNGVHGWGLKSSMKVLDQLEDVGQQLALTFDDEGSVLAVGG 2
           WD  +   VH  GLK S KVL  LEDVGQQLALTF+++GS+LAVGG
Sbjct: 130 WDEIKTEEVHKQGLKLSEKVLTHLEDVGQQLALTFNNDGSMLAVGG 175


>emb|CAN77008.1| hypothetical protein VITISV_036876 [Vitis vinifera]
          Length = 369

 Score =  176 bits (446), Expect = 3e-42
 Identities = 93/166 (56%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
 Frame = -3

Query: 478 PNSKSYGVPLYGASWLPLNLTRS--QTNSSQDDADE-----SPQSIDAXXXXXXXXXXXX 320
           PN K YGVPLYGA+W P  +     Q    + +ADE     S  S  A            
Sbjct: 10  PNYKKYGVPLYGAAWAPSTIINDAPQPLDQKQEADEVSGEGSTPSPAAPTYLVFCGGGGE 69

Query: 319 XXXGIPNALLVSHFDITSNSLSDQPVAKLGTGVDLPYRIAVHPGGEGLVCSMPKSCRWFE 140
              GIPNALL++ FD  SNSLSD PV KLG G DLPYR+AVHPGGEGL+CS+PKSC+WF+
Sbjct: 70  GRSGIPNALLLAEFDFASNSLSDMPVFKLGIGADLPYRMAVHPGGEGLICSLPKSCKWFQ 129

Query: 139 WDAAERNGVHGWGLKSSMKVLDQLEDVGQQLALTFDDEGSVLAVGG 2
           WD  +   VH  GLK S KVL  LEDVGQQLALTF+++GS+LAVGG
Sbjct: 130 WDEIKTEEVHKQGLKLSEKVLTHLEDVGQQLALTFNNDGSMLAVGG 175


>ref|XP_002526027.1| Prolactin regulatory element-binding protein, putative [Ricinus
           communis] gi|223534674|gb|EEF36367.1| Prolactin
           regulatory element-binding protein, putative [Ricinus
           communis]
          Length = 390

 Score =  173 bits (439), Expect = 2e-41
 Identities = 87/156 (55%), Positives = 102/156 (65%)
 Frame = -3

Query: 469 KSYGVPLYGASWLPLNLTRSQTNSSQDDADESPQSIDAXXXXXXXXXXXXXXXGIPNALL 290
           + YGVP Y A+W+P  L RS+  SS  D +   + I                 GIPNAL+
Sbjct: 13  QKYGVPFYSAAWVPYKLVRSKLQSSHSDHENDHEEIADQYYVLLAGGGGEGRSGIPNALV 72

Query: 289 VSHFDITSNSLSDQPVAKLGTGVDLPYRIAVHPGGEGLVCSMPKSCRWFEWDAAERNGVH 110
           +S FD T NSLS QPVAKLGTG DLPYR+ VHPGG+GLVC++P SCR+FEWD  + N  H
Sbjct: 73  LSRFDFTFNSLSPQPVAKLGTGSDLPYRMVVHPGGDGLVCALPNSCRFFEWDEVKDNEAH 132

Query: 109 GWGLKSSMKVLDQLEDVGQQLALTFDDEGSVLAVGG 2
             GLK S K L QLEDVGQQLAL F+ E S LAVGG
Sbjct: 133 KLGLKESEKALTQLEDVGQQLALAFNSESSALAVGG 168


>ref|XP_002312443.1| predicted protein [Populus trichocarpa] gi|222852263|gb|EEE89810.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  163 bits (413), Expect = 2e-38
 Identities = 88/166 (53%), Positives = 105/166 (63%), Gaps = 7/166 (4%)
 Frame = -3

Query: 478 PNSKSYGVPLYGASWLPLNLTRSQTNSS-QDDADESPQSI------DAXXXXXXXXXXXX 320
           P  + YGVPLY A+WLPL       +SS Q + D+  + I                    
Sbjct: 2   PALQKYGVPLYSAAWLPLQFRHEDHDSSKQHEQDKDTEEITHASASSYEYYVILAGGGGE 61

Query: 319 XXXGIPNALLVSHFDITSNSLSDQPVAKLGTGVDLPYRIAVHPGGEGLVCSMPKSCRWFE 140
              GIPNA+L+S FD +SNSLS QPV KL  G DLPYR+ VHPGG+GL+C++P SCR+FE
Sbjct: 62  GRSGIPNAVLLSRFDFSSNSLSPQPVPKLNLGSDLPYRMVVHPGGDGLICALPNSCRFFE 121

Query: 139 WDAAERNGVHGWGLKSSMKVLDQLEDVGQQLALTFDDEGSVLAVGG 2
           WD  E N  H  GLKSS KVL QLEDVGQQLAL F+ + SVLAVGG
Sbjct: 122 WDEVEDNEDHKLGLKSSEKVLTQLEDVGQQLALVFNSDSSVLAVGG 167


>ref|XP_002314804.1| predicted protein [Populus trichocarpa] gi|222863844|gb|EEF00975.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  156 bits (395), Expect = 3e-36
 Identities = 86/177 (48%), Positives = 104/177 (58%), Gaps = 16/177 (9%)
 Frame = -3

Query: 484 ATPNS-KSYGVPLYGASWLPLNLTRSQTNSSQDDADES---------------PQSIDAX 353
           A P S + YGVPLY A+WLP    RS+     D  D S               P +    
Sbjct: 7   ADPQSLQKYGVPLYSAAWLPYKELRSKLQPRDDHVDSSKQQEQQQEEEEEIPKPSASSHE 66

Query: 352 XXXXXXXXXXXXXXGIPNALLVSHFDITSNSLSDQPVAKLGTGVDLPYRIAVHPGGEGLV 173
                         GIPNA+L+S FD +SNSL+ QPVAKLG G  LPYR+ VHPGG+G++
Sbjct: 67  HYVVLAGGGGEGSSGIPNAVLLSCFDFSSNSLASQPVAKLGLGSQLPYRMVVHPGGDGVI 126

Query: 172 CSMPKSCRWFEWDAAERNGVHGWGLKSSMKVLDQLEDVGQQLALTFDDEGSVLAVGG 2
           C+ P SCR+F+WD  + N  H  GLK S KVL QLEDVGQQLAL F+ + SVLAVGG
Sbjct: 127 CAFPSSCRFFDWDEVKDNEDHKLGLKPSKKVLTQLEDVGQQLALAFNSDSSVLAVGG 183


Top