BLASTX nr result

ID: Panax21_contig00020349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020349
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi...   183   3e-44
emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]   183   3e-44
gb|AAS80150.1| ACT11D09.4 [Cucumis melo]                              170   3e-40
ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi...   169   6e-40
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...   169   6e-40

>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Vitis vinifera]
          Length = 627

 Score =  183 bits (465), Expect = 3e-44
 Identities = 87/158 (55%), Positives = 114/158 (72%)
 Frame = +1

Query: 1   KSLNPDVTSYRTLIDTYFKVGRIDDAVEKYVKMVETGLRVIPPYANRWFSELIEKGKVVN 180
           KSL PDV  YRT I+ YF + R DDA++ + + V++GLRVI  +AN+ F EL+ KGK   
Sbjct: 420 KSLTPDVNIYRTFIEAYFGMERADDALQMFNRFVDSGLRVIVSFANKVFDELVNKGKAGE 479

Query: 181 CVPILRKMAERDPKPDVTSYDLVIRGLCKEVNLDASLDLVGQMVRCGVGVTPALGQFLSE 360
           CVP+L KM E+DPKPD T+Y++VI+GLCKE   DAS DL+GQMVR  +GVTP+L +F+ E
Sbjct: 480 CVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVE 539

Query: 361 VFVKEGRGAEIERLINARYPAYATHAPPAGPPQYARTP 474
            F KEGR  EIERL+ A  P +  + PP+GPP+ A  P
Sbjct: 540 AFGKEGRSEEIERLLEANRPGFGAYWPPSGPPRMAGPP 577


>emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
          Length = 627

 Score =  183 bits (465), Expect = 3e-44
 Identities = 87/158 (55%), Positives = 114/158 (72%)
 Frame = +1

Query: 1   KSLNPDVTSYRTLIDTYFKVGRIDDAVEKYVKMVETGLRVIPPYANRWFSELIEKGKVVN 180
           KSL PDV  YRT I+ YF + R DDA++ + + V++GLRVI  +AN+ F EL+ KGK   
Sbjct: 420 KSLTPDVNIYRTFIEAYFGMERADDALQMFNRFVDSGLRVIVSFANKVFDELVNKGKAGE 479

Query: 181 CVPILRKMAERDPKPDVTSYDLVIRGLCKEVNLDASLDLVGQMVRCGVGVTPALGQFLSE 360
           CVP+L KM E+DPKPD T+Y++VI+GLCKE   DAS DL+GQMVR  +GVTP+L +F+ E
Sbjct: 480 CVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVE 539

Query: 361 VFVKEGRGAEIERLINARYPAYATHAPPAGPPQYARTP 474
            F KEGR  EIERL+ A  P +  + PP+GPP+ A  P
Sbjct: 540 AFGKEGRSEEIERLLEANRPGFGAYWPPSGPPRMAGPP 577


>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
          Length = 896

 Score =  170 bits (431), Expect = 3e-40
 Identities = 80/157 (50%), Positives = 113/157 (71%)
 Frame = +1

Query: 1   KSLNPDVTSYRTLIDTYFKVGRIDDAVEKYVKMVETGLRVIPPYANRWFSELIEKGKVVN 180
           KSL+PDV ++RTLI++Y K+ +IDDA+  + +MV+ GLRV+  + N  F ELI+ GK  +
Sbjct: 428 KSLSPDVPTHRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNMVFGELIKNGKAAD 487

Query: 181 CVPILRKMAERDPKPDVTSYDLVIRGLCKEVNLDASLDLVGQMVRCGVGVTPALGQFLSE 360
           C  IL KM ERDPKPD T YD+VIRGLC E  LD S +L+ Q++R G+G+TP L +F+ +
Sbjct: 488 CAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDTSRELLDQIMRYGIGLTPTLEEFVKD 547

Query: 361 VFVKEGRGAEIERLINARYPAYATHAPPAGPPQYART 471
            FVK GR  EIERL+N     +A + PP+GPP+ +++
Sbjct: 548 AFVKAGRHEEIERLLNMNKWGHAAYRPPSGPPRISQS 584


>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 559

 Score =  169 bits (428), Expect = 6e-40
 Identities = 81/157 (51%), Positives = 113/157 (71%)
 Frame = +1

Query: 1   KSLNPDVTSYRTLIDTYFKVGRIDDAVEKYVKMVETGLRVIPPYANRWFSELIEKGKVVN 180
           KSL+PDV ++RTLI++Y K+ +IDDA+  + +MV+ GLRV+  + N  F ELI+ GK  +
Sbjct: 236 KSLSPDVPTHRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNMVFGELIKNGKAAD 295

Query: 181 CVPILRKMAERDPKPDVTSYDLVIRGLCKEVNLDASLDLVGQMVRCGVGVTPALGQFLSE 360
           C  IL KM ERDPKPD T YD+VIRGLC E  LDAS +L+ Q++R G+G+TP L +F+ E
Sbjct: 296 CAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLEEFVKE 355

Query: 361 VFVKEGRGAEIERLINARYPAYATHAPPAGPPQYART 471
            FVK GR  EIERL+N     +A + P +GPP+ +++
Sbjct: 356 AFVKAGRHEEIERLLNMNKWGHAAYRPLSGPPRISQS 392


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 871

 Score =  169 bits (428), Expect = 6e-40
 Identities = 81/157 (51%), Positives = 113/157 (71%)
 Frame = +1

Query: 1   KSLNPDVTSYRTLIDTYFKVGRIDDAVEKYVKMVETGLRVIPPYANRWFSELIEKGKVVN 180
           KSL+PDV ++RTLI++Y K+ +IDDA+  + +MV+ GLRV+  + N  F ELI+ GK  +
Sbjct: 402 KSLSPDVPTHRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNMVFGELIKNGKAAD 461

Query: 181 CVPILRKMAERDPKPDVTSYDLVIRGLCKEVNLDASLDLVGQMVRCGVGVTPALGQFLSE 360
           C  IL KM ERDPKPD T YD+VIRGLC E  LDAS +L+ Q++R G+G+TP L +F+ E
Sbjct: 462 CAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLEEFVKE 521

Query: 361 VFVKEGRGAEIERLINARYPAYATHAPPAGPPQYART 471
            FVK GR  EIERL+N     +A + P +GPP+ +++
Sbjct: 522 AFVKAGRHEEIERLLNMNKWGHAAYRPLSGPPRISQS 558


Top