BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020324
         (1404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lyc...   332   3e-98
gb|AFD62803.1| shikimate kinase, partial [Ipomoea purpurea]           301   7e-92
gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]            299   1e-91
ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [...   290   5e-89
gb|ACM45083.1| shikimate kinase [Vitis vinifera]                      290   5e-89

>ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lycopersicum]
           gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate
           kinase, chloroplastic; Flags: Precursor
           gi|19349|emb|CAA45121.1| shikimate kinase precursor
           [Solanum lycopersicum]
          Length = 300

 Score =  332 bits (852), Expect(2) = 3e-98
 Identities = 163/230 (70%), Positives = 192/230 (83%)
 Frame = +2

Query: 173 MAAKASQSLQFSTWIDSEKIVRKPIRSLRFSPRFREQQRVQILISSSLQPRKAATCHRPV 352
           M A+ SQSLQ S+WI+S+K+VRKP   LRFS ++ E+ R ++++S  LQPRKAA   R V
Sbjct: 1   MEARVSQSLQLSSWINSDKVVRKPSGLLRFSEKWNEKPRHRVVVSCHLQPRKAAHSDRRV 60

Query: 353 ALKVSCSPQNFEASVLESGTFPASFDEAVILKNKSEEIEPYLNGRCIYLVGMMGSGKTTV 532
            LKVSCSPQN +ASVLESG F AS DE   LKNK+EE+E YL+GRC+YLVGMMG GKTTV
Sbjct: 61  QLKVSCSPQNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTV 120

Query: 533 GRILSEVLGYSFFDSDRLIEQSIGGTSVADIFKLHGESFFRDNETEILQKLSSMQRLVIS 712
           GRIL+E LGYSFFD DRLIEQ++GG +VA+IF+L GESFFRDNETE+L KLS M RLV+S
Sbjct: 121 GRILAETLGYSFFDCDRLIEQAVGGITVAEIFELRGESFFRDNETEVLHKLSLMHRLVVS 180

Query: 713 TGGGAVVRPVNWKHMRKGISIWLDVPLEALARRITAVGTDSRPLLHNESG 862
           TGGGAVVRP+NW+HM KGIS+WLDVPLEALA+RIT  GT SRPLLH ESG
Sbjct: 181 TGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHEESG 230



 Score = 54.3 bits (129), Expect(2) = 3e-98
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +1

Query: 982  YTNANARISLENIAAKLGYGDVCNITPTEIAIEALVQIEYFLK 1110
            Y NA+AR+SLENIA K    DVC+ITP EI +E L+QIE FLK
Sbjct: 251  YANASARVSLENIALKREK-DVCHITPAEITLEVLIQIENFLK 292


>gb|AFD62803.1| shikimate kinase, partial [Ipomoea purpurea]
          Length = 298

 Score =  301 bits (772), Expect(2) = 7e-92
 Identities = 151/230 (65%), Positives = 182/230 (79%)
 Frame = +2

Query: 173 MAAKASQSLQFSTWIDSEKIVRKPIRSLRFSPRFREQQRVQILISSSLQPRKAATCHRPV 352
           M AK ++SLQ S WI SE  + K   SL FS    + +R Q+ IS   QP KA + HRP 
Sbjct: 2   MEAKIARSLQLSPWISSENRLPKSNGSLSFSKCQTKHRRSQMFISCHFQPIKAKSWHRPC 61

Query: 353 ALKVSCSPQNFEASVLESGTFPASFDEAVILKNKSEEIEPYLNGRCIYLVGMMGSGKTTV 532
            L  SCS QN +AS++ES     S DE  +LK+KSEEIEP L+GRCIYLVGMMGSGKTTV
Sbjct: 62  LLTASCSSQNSQASIMESENSLPSLDEIQVLKSKSEEIEPCLSGRCIYLVGMMGSGKTTV 121

Query: 533 GRILSEVLGYSFFDSDRLIEQSIGGTSVADIFKLHGESFFRDNETEILQKLSSMQRLVIS 712
           GRI++E LGY+FFD D LIEQ++GGTSVA+IFKLHGE FFRDNETE+L+KLS M+ +V+S
Sbjct: 122 GRIIAEALGYAFFDCDTLIEQAVGGTSVAEIFKLHGEGFFRDNETEVLRKLSLMREVVVS 181

Query: 713 TGGGAVVRPVNWKHMRKGISIWLDVPLEALARRITAVGTDSRPLLHNESG 862
           TGGGAVVRP+NW++M KGIS+WLDVP++ALARRI+AVGT SRPLLHNESG
Sbjct: 182 TGGGAVVRPINWRYMHKGISVWLDVPVDALARRISAVGTHSRPLLHNESG 231



 Score = 63.9 bits (154), Expect(2) = 7e-92
 Identities = 33/44 (75%), Positives = 35/44 (79%)
 Frame = +1

Query: 982  YTNANARISLENIAAKLGYGDVCNITPTEIAIEALVQIEYFLKK 1113
            Y N+ AR+ LENIAAK G  DVC ITPTEIAIEALVQI  FLKK
Sbjct: 252  YANSKARVCLENIAAKSGCIDVCTITPTEIAIEALVQIGNFLKK 295


>gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
          Length = 302

 Score =  299 bits (766), Expect(2) = 1e-91
 Identities = 149/231 (64%), Positives = 185/231 (80%), Gaps = 1/231 (0%)
 Frame = +2

Query: 173 MAAKASQSLQFSTWIDSEKIVRKPIRSLRFSPRFREQQRVQILISSSLQPR-KAATCHRP 349
           M  K +  L  S  I SE+  R+   S+R S RFREQ R+ +L+S+ LQ + + +  H+ 
Sbjct: 1   MDGKVANGLVVSPRIGSERFARRTCGSVRVSRRFREQDRLPVLVSAQLQDKTRNSNWHKT 60

Query: 350 VALKVSCSPQNFEASVLESGTFPASFDEAVILKNKSEEIEPYLNGRCIYLVGMMGSGKTT 529
            +L+VSCS +NF ASVLESG   A FD+A+ILKNKS+EIEPYL+GRCIYLVGMMGSGKTT
Sbjct: 61  ASLEVSCSYKNFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTT 120

Query: 530 VGRILSEVLGYSFFDSDRLIEQSIGGTSVADIFKLHGESFFRDNETEILQKLSSMQRLVI 709
           VG++LS+VL Y+FFDSD L+EQ +   SVA+IF L+GE FFRD ETE+L+KLS M RLV+
Sbjct: 121 VGKVLSQVLSYAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKLSLMHRLVV 180

Query: 710 STGGGAVVRPVNWKHMRKGISIWLDVPLEALARRITAVGTDSRPLLHNESG 862
           STGGGAVVRP+NWK+M+KGIS+WLDVPLEALARRI AVGT SRPLLH++SG
Sbjct: 181 STGGGAVVRPINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHDSG 231



 Score = 65.5 bits (158), Expect(2) = 1e-91
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = +1

Query: 982  YTNANARISLENIAAKLGYGDVCNITPTEIAIEALVQIEYFLKK 1113
            Y NANAR+SLE++AAKLG+ DV N+TPT IAIEAL QIE FLK+
Sbjct: 252  YANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFLKE 295


>ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
           gi|147772563|emb|CAN67344.1| hypothetical protein
           VITISV_038221 [Vitis vinifera]
           gi|296082504|emb|CBI21509.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  290 bits (741), Expect(2) = 5e-89
 Identities = 145/230 (63%), Positives = 182/230 (79%)
 Frame = +2

Query: 173 MAAKASQSLQFSTWIDSEKIVRKPIRSLRFSPRFREQQRVQILISSSLQPRKAATCHRPV 352
           M AK +  +QFS  ID++K  R+P  SL FS + REQ    I  S   QPR+ +   + V
Sbjct: 1   MEAKIALKMQFSACIDTDKFARRPSVSLPFSQKLREQHGHPI--SCHFQPRRTSNWQKHV 58

Query: 353 ALKVSCSPQNFEASVLESGTFPASFDEAVILKNKSEEIEPYLNGRCIYLVGMMGSGKTTV 532
           AL+ S S +NF A +LESG+FP S DEA+ILKNKS+EI PY++GRC+YLVGMMGSGKTT+
Sbjct: 59  ALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTI 118

Query: 533 GRILSEVLGYSFFDSDRLIEQSIGGTSVADIFKLHGESFFRDNETEILQKLSSMQRLVIS 712
           G+ILSEVLGYSF DSD L+E ++ GTSVA+IF L+GE FFR+ E+E LQKLS    +V+S
Sbjct: 119 GKILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKLSLTHHMVVS 178

Query: 713 TGGGAVVRPVNWKHMRKGISIWLDVPLEALARRITAVGTDSRPLLHNESG 862
           TGGGAV+RP+NWK+M KGIS+WLDVPLEALARRI+AVGT+SRPLLH++SG
Sbjct: 179 TGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHHDSG 228



 Score = 66.2 bits (160), Expect(2) = 5e-89
 Identities = 33/43 (76%), Positives = 37/43 (86%)
 Frame = +1

Query: 982  YTNANARISLENIAAKLGYGDVCNITPTEIAIEALVQIEYFLK 1110
            Y NANAR+SLE IAAKLG+ DV N+TPT IAIEAL+QIE FLK
Sbjct: 249  YANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEAFLK 291


>gb|ACM45083.1| shikimate kinase [Vitis vinifera]
          Length = 300

 Score =  290 bits (741), Expect(2) = 5e-89
 Identities = 145/230 (63%), Positives = 182/230 (79%)
 Frame = +2

Query: 173 MAAKASQSLQFSTWIDSEKIVRKPIRSLRFSPRFREQQRVQILISSSLQPRKAATCHRPV 352
           M AK +  +QFS  ID++K  R+P  SL FS + REQ    I  S   QPR+ +   + V
Sbjct: 1   MEAKIALKMQFSACIDTDKFARRPSVSLPFSQKLREQHGHPI--SCHFQPRRTSNWQKHV 58

Query: 353 ALKVSCSPQNFEASVLESGTFPASFDEAVILKNKSEEIEPYLNGRCIYLVGMMGSGKTTV 532
           AL+ S S +NF A +LESG+FP S DEA+ILKNKS+EI PY++GRC+YLVGMMGSGKTT+
Sbjct: 59  ALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTI 118

Query: 533 GRILSEVLGYSFFDSDRLIEQSIGGTSVADIFKLHGESFFRDNETEILQKLSSMQRLVIS 712
           G+ILSEVLGYSF DSD L+E ++ GTSVA+IF L+GE FFR+ E+E LQKLS    +V+S
Sbjct: 119 GKILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKLSLTHHMVVS 178

Query: 713 TGGGAVVRPVNWKHMRKGISIWLDVPLEALARRITAVGTDSRPLLHNESG 862
           TGGGAV+RP+NWK+M KGIS+WLDVPLEALARRI+AVGT+SRPLLH++SG
Sbjct: 179 TGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHHDSG 228



 Score = 66.2 bits (160), Expect(2) = 5e-89
 Identities = 33/43 (76%), Positives = 37/43 (86%)
 Frame = +1

Query: 982  YTNANARISLENIAAKLGYGDVCNITPTEIAIEALVQIEYFLK 1110
            Y NANAR+SLE IAAKLG+ DV N+TPT IAIEAL+QIE FLK
Sbjct: 249  YANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEAFLK 291