BLASTX nr result
ID: Panax21_contig00020321
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00020321 (369 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AGG16262.1| C3HC4 type RING finger, partial [Oryza sativa Jap... 148 5e-34 ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group] g... 148 5e-34 emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group] gi... 148 5e-34 gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sati... 148 5e-34 ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 147 9e-34 >gb|AGG16262.1| C3HC4 type RING finger, partial [Oryza sativa Japonica Group] Length = 187 Score = 148 bits (373), Expect = 5e-34 Identities = 64/81 (79%), Positives = 69/81 (85%) Frame = -3 Query: 364 FSGIMTECNTDMPTETVLPPEDAECCICLCAYEDGTELRELPCCHHFHCTCIDKWLYINA 185 F GIMTEC T+ P E VL PEDAECCICL AY+DG ELRELPC HHFHC CIDKWL+INA Sbjct: 107 FGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINA 166 Query: 184 TCPLCKFNILKNGNQSGSEEV 122 TCPLCKFNI K+G+ SGSEEV Sbjct: 167 TCPLCKFNIRKSGSSSGSEEV 187 >ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group] gi|125549384|gb|EAY95206.1| hypothetical protein OsI_17025 [Oryza sativa Indica Group] gi|125591326|gb|EAZ31676.1| hypothetical protein OsJ_15824 [Oryza sativa Japonica Group] gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa Japonica Group] Length = 267 Score = 148 bits (373), Expect = 5e-34 Identities = 64/81 (79%), Positives = 69/81 (85%) Frame = -3 Query: 364 FSGIMTECNTDMPTETVLPPEDAECCICLCAYEDGTELRELPCCHHFHCTCIDKWLYINA 185 F GIMTEC T+ P E VL PEDAECCICL AY+DG ELRELPC HHFHC CIDKWL+INA Sbjct: 187 FGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINA 246 Query: 184 TCPLCKFNILKNGNQSGSEEV 122 TCPLCKFNI K+G+ SGSEEV Sbjct: 247 TCPLCKFNIRKSGSSSGSEEV 267 >emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group] gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza sativa Indica Group] Length = 324 Score = 148 bits (373), Expect = 5e-34 Identities = 64/81 (79%), Positives = 69/81 (85%) Frame = -3 Query: 364 FSGIMTECNTDMPTETVLPPEDAECCICLCAYEDGTELRELPCCHHFHCTCIDKWLYINA 185 F GIMTEC T+ P E VL PEDAECCICL AY+DG ELRELPC HHFHC CIDKWL+INA Sbjct: 244 FGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINA 303 Query: 184 TCPLCKFNILKNGNQSGSEEV 122 TCPLCKFNI K+G+ SGSEEV Sbjct: 304 TCPLCKFNIRKSGSSSGSEEV 324 >gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group] Length = 250 Score = 148 bits (373), Expect = 5e-34 Identities = 64/81 (79%), Positives = 69/81 (85%) Frame = -3 Query: 364 FSGIMTECNTDMPTETVLPPEDAECCICLCAYEDGTELRELPCCHHFHCTCIDKWLYINA 185 F GIMTEC T+ P E VL PEDAECCICL AY+DG ELRELPC HHFHC CIDKWL+INA Sbjct: 170 FGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINA 229 Query: 184 TCPLCKFNILKNGNQSGSEEV 122 TCPLCKFNI K+G+ SGSEEV Sbjct: 230 TCPLCKFNIRKSGSSSGSEEV 250 >ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2 [Vitis vinifera] Length = 365 Score = 147 bits (371), Expect = 9e-34 Identities = 65/80 (81%), Positives = 68/80 (85%) Frame = -3 Query: 367 SFSGIMTECNTDMPTETVLPPEDAECCICLCAYEDGTELRELPCCHHFHCTCIDKWLYIN 188 SF GIMTEC+TD P E V+P EDAECCICL AYED TELRELPC H FHCTCIDKWLYIN Sbjct: 284 SFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYIN 343 Query: 187 ATCPLCKFNILKNGNQSGSE 128 ATCPLCK NILKN +QSG E Sbjct: 344 ATCPLCKLNILKNASQSGCE 363