BLASTX nr result

ID: Panax21_contig00020321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020321
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGG16262.1| C3HC4 type RING finger, partial [Oryza sativa Jap...   148   5e-34
ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group] g...   148   5e-34
emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group] gi...   148   5e-34
gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sati...   148   5e-34
ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   147   9e-34

>gb|AGG16262.1| C3HC4 type RING finger, partial [Oryza sativa Japonica Group]
          Length = 187

 Score =  148 bits (373), Expect = 5e-34
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = -3

Query: 364 FSGIMTECNTDMPTETVLPPEDAECCICLCAYEDGTELRELPCCHHFHCTCIDKWLYINA 185
           F GIMTEC T+ P E VL PEDAECCICL AY+DG ELRELPC HHFHC CIDKWL+INA
Sbjct: 107 FGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINA 166

Query: 184 TCPLCKFNILKNGNQSGSEEV 122
           TCPLCKFNI K+G+ SGSEEV
Sbjct: 167 TCPLCKFNIRKSGSSSGSEEV 187


>ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group]
           gi|125549384|gb|EAY95206.1| hypothetical protein
           OsI_17025 [Oryza sativa Indica Group]
           gi|125591326|gb|EAZ31676.1| hypothetical protein
           OsJ_15824 [Oryza sativa Japonica Group]
           gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa
           Japonica Group]
          Length = 267

 Score =  148 bits (373), Expect = 5e-34
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = -3

Query: 364 FSGIMTECNTDMPTETVLPPEDAECCICLCAYEDGTELRELPCCHHFHCTCIDKWLYINA 185
           F GIMTEC T+ P E VL PEDAECCICL AY+DG ELRELPC HHFHC CIDKWL+INA
Sbjct: 187 FGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINA 246

Query: 184 TCPLCKFNILKNGNQSGSEEV 122
           TCPLCKFNI K+G+ SGSEEV
Sbjct: 247 TCPLCKFNIRKSGSSSGSEEV 267


>emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group]
           gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza
           sativa Indica Group]
          Length = 324

 Score =  148 bits (373), Expect = 5e-34
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = -3

Query: 364 FSGIMTECNTDMPTETVLPPEDAECCICLCAYEDGTELRELPCCHHFHCTCIDKWLYINA 185
           F GIMTEC T+ P E VL PEDAECCICL AY+DG ELRELPC HHFHC CIDKWL+INA
Sbjct: 244 FGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINA 303

Query: 184 TCPLCKFNILKNGNQSGSEEV 122
           TCPLCKFNI K+G+ SGSEEV
Sbjct: 304 TCPLCKFNIRKSGSSSGSEEV 324


>gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group]
          Length = 250

 Score =  148 bits (373), Expect = 5e-34
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = -3

Query: 364 FSGIMTECNTDMPTETVLPPEDAECCICLCAYEDGTELRELPCCHHFHCTCIDKWLYINA 185
           F GIMTEC T+ P E VL PEDAECCICL AY+DG ELRELPC HHFHC CIDKWL+INA
Sbjct: 170 FGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINA 229

Query: 184 TCPLCKFNILKNGNQSGSEEV 122
           TCPLCKFNI K+G+ SGSEEV
Sbjct: 230 TCPLCKFNIRKSGSSSGSEEV 250


>ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
           [Vitis vinifera]
          Length = 365

 Score =  147 bits (371), Expect = 9e-34
 Identities = 65/80 (81%), Positives = 68/80 (85%)
 Frame = -3

Query: 367 SFSGIMTECNTDMPTETVLPPEDAECCICLCAYEDGTELRELPCCHHFHCTCIDKWLYIN 188
           SF GIMTEC+TD P E V+P EDAECCICL AYED TELRELPC H FHCTCIDKWLYIN
Sbjct: 284 SFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYIN 343

Query: 187 ATCPLCKFNILKNGNQSGSE 128
           ATCPLCK NILKN +QSG E
Sbjct: 344 ATCPLCKLNILKNASQSGCE 363


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