BLASTX nr result
ID: Panax21_contig00020320
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00020320
(2574 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 1052 0.0
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 1046 0.0
ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho... 1022 0.0
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 1014 0.0
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 1009 0.0
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 1052 bits (2720), Expect = 0.0
Identities = 532/801 (66%), Positives = 628/801 (78%), Gaps = 3/801 (0%)
Frame = -1
Query: 2394 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGA--YAKVQFTTSNSAN 2221
M KTI + GF S+ SA+++K FLE+YTG+GT+ A+E+K+ + G + +AKVQFT+ A
Sbjct: 1 MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAE 60
Query: 2220 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 2041
IITL +++WYG YLKA E DLDI+PKP+ F+ M+ ITLHFGCQ+S E++ V WK
Sbjct: 61 FIITLCKKKVWYGRNYLKAREMDLDIIPKPRA--FLHSMDRITLHFGCQMSDERFCVLWK 118
Query: 2040 KEDVTVKFGFGLKKIYFFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 1861
+V+VKFG GL+K YFFLSH S +YKL+LS+EN+WQI+L+HPR Q F++IQL GAP+
Sbjct: 119 AINVSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQ 178
Query: 1860 IFEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYK 1684
I+EK + YFKE DDQWVR DFTPS +GQS ALCLE+P G ++P+F E YK
Sbjct: 179 IYEKDVPVLSYYFKEAPDDQWVREIDFTPSCFIGQSFALCLELPYGSQLPNFRENFAYYK 238
Query: 1683 ENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFYR 1504
EN+ +FILESGS++S N LVP+L PP+G LP+ I FKI LVQNG + GP +D +F+R
Sbjct: 239 ENDGKFILESGSSYSHNLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGPTLDTSFFR 298
Query: 1503 LVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGLV 1324
LVDP R I+FIEHALEKL HLK CCY+PV+W EQY Y + SP I+LD+GLV
Sbjct: 299 LVDPER-FPISFIEHALEKLYHLKECCYEPVRWLSEQYRTY-VKKPVAGSPAISLDTGLV 356
Query: 1323 YFHSVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIAT 1144
Y VQITPC+VY+CGPEVNVSNRVLR YP+DIDNF+RVSFLDE +K++ST + PR++
Sbjct: 357 YVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHSTVISPRMSK 416
Query: 1143 VNGERRTAIYKRILSTLRNGIVIGDKKFDFLAFSSSQLRDNSAWMFASTTSLSACDIRRW 964
RRT +Y+RILS L+NGIVIGDKKFDFLAFSSSQLRDNSAWMFAS L+A +IR W
Sbjct: 417 EG--RRTGVYRRILSILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTAAEIRSW 474
Query: 963 MGDFSRIRNVAKYAARLGQSFSSSTETLSVRKXXXXXIPDVEVVKGKTKYIFSDGIGKIS 784
MGDFS+IRNVAKYAARLGQSFSSS ETL V K IPD+E+ KG+T Y+FSDGIGKIS
Sbjct: 475 MGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSDGIGKIS 534
Query: 783 ADFARNVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPTXXXXXXXXXXXXKFESDNIGLDV 604
A VAIKCG KSSTPSAFQIRYGGYKGVVAVDPT K+ESDN LDV
Sbjct: 535 PQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDV 594
Query: 603 LAWSKYQPCFLNRQLISLLSTLGVKDHVFEKKQKEAVDQMDMILKDPLRAQEALDLMYPG 424
LAWSKYQP FLNRQLI+LLSTLGVKDHVFEKKQ+ AVDQ+D ILKDP+ AQEAL+LM PG
Sbjct: 595 LAWSKYQPSFLNRQLITLLSTLGVKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPG 654
Query: 423 ENANILKDMLSCGYKPDAEPFLSMMLQTFRASKLLDLRIKTRIFVRGGRSMMGCLDETRT 244
EN N+LK+ML CGYKPDAEPFLSMMLQTFRA+KLL+LR KTRIFV GRSMMGCLDETRT
Sbjct: 655 ENTNVLKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRT 714
Query: 243 LEYGQVFVQFSGYGRRAFYDDSLLMYGDSGLDHHTHIVEGKVVVAKNPCLHPGDVRVLRA 64
LEYG+VFVQ SG G R + DSL+ G SG H I+EGK+VVAKNPCLHPGDVRVL A
Sbjct: 715 LEYGEVFVQISGTGGRQSFGDSLMFRG-SGSHHDNFILEGKIVVAKNPCLHPGDVRVLWA 773
Query: 63 VNVPALHHMVDCVVFPQKGTR 1
VNVP LHHMVDCVVFPQKG R
Sbjct: 774 VNVPTLHHMVDCVVFPQKGKR 794
>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
Length = 1109
Score = 1046 bits (2704), Expect = 0.0
Identities = 539/801 (67%), Positives = 638/801 (79%), Gaps = 3/801 (0%)
Frame = -1
Query: 2394 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGA--YAKVQFTTSNSAN 2221
MGKTI + G S SA ++K FLE+YTG+GT+ A+E+K+ K G + +AKVQFT+ A
Sbjct: 1 MGKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAE 60
Query: 2220 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 2041
II+LA ++LWYG YLKA E DLDI+PKP+T F+ M+ ITLHFG Q+S E++ V WK
Sbjct: 61 LIISLA-KQLWYGGNYLKAREMDLDIIPKPRT--FLHSMDRITLHFGYQMSNERFCVLWK 117
Query: 2040 KEDVTVKFGFGLKKIYFFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 1861
+V+VKFGFGL+K YFFLSH S +YKL+LS EN+WQI+LR PR Q F++IQL AP+
Sbjct: 118 AINVSVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQ 177
Query: 1860 IFEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYK 1684
I+EK + S SYFKET DDQWVR DFTPS ++GQSSALCLE+P+G ++P+F E YK
Sbjct: 178 IYEK-DVSALSYFKETPDDQWVREIDFTPSCSIGQSSALCLELPHGSQLPNFCENFARYK 236
Query: 1683 ENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFYR 1504
EN+ +FILESG++FS N LVP++ PP+G LP+ I FKI LVQNG + GP +D NF+R
Sbjct: 237 ENDRKFILESGASFSGNLHLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGPTLDTNFFR 296
Query: 1503 LVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGLV 1324
VDP+R I+I+FIEHALEKL +L+ CCY+PV+W EQY Y S+Q SP I+LD+GLV
Sbjct: 297 WVDPQR-INISFIEHALEKLYYLEECCYEPVRWLHEQYRTY-ISKQVAGSPAISLDTGLV 354
Query: 1323 YFHSVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIAT 1144
Y VQITPC+VY+CGPEVNVSNRVLR YP+DIDNF+RVSFLDE +K++ST + PR++
Sbjct: 355 YVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTVISPRMS- 413
Query: 1143 VNGERRTAIYKRILSTLRNGIVIGDKKFDFLAFSSSQLRDNSAWMFASTTSLSACDIRRW 964
N RRT +Y+RILS L+NGIVIGDKKFDFLA SSSQLRDNSAWMFAS L+A DIR
Sbjct: 414 -NEGRRTGVYRRILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTAADIRSR 472
Query: 963 MGDFSRIRNVAKYAARLGQSFSSSTETLSVRKXXXXXIPDVEVVKGKTKYIFSDGIGKIS 784
MGDFS+IRNVAKYAARLGQSFSSS ETL V K IPD+E + T Y+FSDGIGKIS
Sbjct: 473 MGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKIS 532
Query: 783 ADFARNVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPTXXXXXXXXXXXXKFESDNIGLDV 604
A+ A VAIKCG K+STPSAFQIRYGGYKGVVAVDPT K+ES+N LDV
Sbjct: 533 AELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDV 592
Query: 603 LAWSKYQPCFLNRQLISLLSTLGVKDHVFEKKQKEAVDQMDMILKDPLRAQEALDLMYPG 424
L+WSKY+PCFLNRQLI+LLSTLGVKDHVFEKKQ+EAVDQ+D ILKDPLRAQEAL+LM PG
Sbjct: 593 LSWSKYRPCFLNRQLITLLSTLGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPG 652
Query: 423 ENANILKDMLSCGYKPDAEPFLSMMLQTFRASKLLDLRIKTRIFVRGGRSMMGCLDETRT 244
EN NILK+ML CGYKPDAEPFLSMMLQTFRA+KLL+LR KTRIFV GRSMMGCLDETRT
Sbjct: 653 ENTNILKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRT 712
Query: 243 LEYGQVFVQFSGYGRRAFYDDSLLMYGDSGLDHHTHIVEGKVVVAKNPCLHPGDVRVLRA 64
LEYG+VFVQ SG G R + DSL+ YG SG H I+EGKVVVAKNPCLHPGDVR+L A
Sbjct: 713 LEYGEVFVQISGTGGRQSFGDSLMFYG-SGSHHDNFILEGKVVVAKNPCLHPGDVRILSA 771
Query: 63 VNVPALHHMVDCVVFPQKGTR 1
V+VPALHHMVDCVVFPQKG R
Sbjct: 772 VDVPALHHMVDCVVFPQKGMR 792
>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
[Populus trichocarpa]
Length = 1133
Score = 1022 bits (2643), Expect = 0.0
Identities = 515/809 (63%), Positives = 630/809 (77%), Gaps = 11/809 (1%)
Frame = -1
Query: 2394 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGA--YAKVQFTTSNSAN 2221
M KT+ +SGF S +A V+ FLE +TG GTV A+++++ + GGA YA VQFTT+ +A
Sbjct: 1 MSKTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGARKYAIVQFTTTRAAE 60
Query: 2220 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 2041
II+LAN RLWYG YL A D DI+P+P++ F+ ME +TLHFG Q SKEK+S W
Sbjct: 61 QIISLANPRLWYGHSYLNARPMDRDIIPQPRS--FLHTMESVTLHFGYQTSKEKFSAVWS 118
Query: 2040 KEDVTVKFGFGLKKIYFFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 1861
+V+V FG G++K++FFLSH +YKL L FEN+WQIEL PR QT +++IQL GAPR
Sbjct: 119 GNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPR 178
Query: 1860 IFEKP--------EDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDF 1705
I+E+ ED + +YF++ D+QWVRTTDFTPS +G SS+LCLE+PN +++P+F
Sbjct: 179 IYERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNF 238
Query: 1704 SE-IVVYKENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGP 1528
+E YKENE F+LESG TFS+N DLVP++ P G+ LPYNI F++ +LVQNG + G
Sbjct: 239 NENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGS 298
Query: 1527 AIDDNFYRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPT 1348
+DD FYRLVDP R + + IE+ALEKL HLK CCY+P KW+ EQY KY TS +SP
Sbjct: 299 MLDDIFYRLVDPNR-MPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPV 357
Query: 1347 IALDSGLVYFHSVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYST 1168
++LD+GLVY + VQITPC+V++CGPEVNVSNRVLR+Y +DIDNF+RVSF+DEE +K++ST
Sbjct: 358 LSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHST 417
Query: 1167 DLCPRIATVNGERRTAIYKRILSTLRNGIVIGDKKFDFLAFSSSQLRDNSAWMFASTTSL 988
D+ PR ++ N RRTAIY RILSTL+NGIVIGDKKF+FLAFSSSQLR+NS WMFAS L
Sbjct: 418 DVSPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGL 477
Query: 987 SACDIRRWMGDFSRIRNVAKYAARLGQSFSSSTETLSVRKXXXXXIPDVEVVKGKTKYIF 808
+A DIR WMG F +IRNVA+YAARLGQSF SSTETLSV IPD+EV +G T+Y+F
Sbjct: 478 TAADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLF 537
Query: 807 SDGIGKISADFARNVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPTXXXXXXXXXXXXKFE 628
SDGIGKISA+FAR VAIKCG K TPSAFQIRY GYKGVVAVDPT K+E
Sbjct: 538 SDGIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYE 597
Query: 627 SDNIGLDVLAWSKYQPCFLNRQLISLLSTLGVKDHVFEKKQKEAVDQMDMILKDPLRAQE 448
S+N LDVLA SKYQPCFLNRQLI+LLSTLGV DH FE+KQ+EAVDQ+D +L DPLRAQE
Sbjct: 598 SENTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQE 657
Query: 447 ALDLMYPGENANILKDMLSCGYKPDAEPFLSMMLQTFRASKLLDLRIKTRIFVRGGRSMM 268
AL+LM PGEN NILK+ML CGY+PDAEPFLSMMLQTFRASKLL+LR KTRIF+ GRSMM
Sbjct: 658 ALELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMM 717
Query: 267 GCLDETRTLEYGQVFVQFSGYGRRAFYDDSLLMYGDSGLDHHTHIVEGKVVVAKNPCLHP 88
GCLDETRTLE+GQVFV+FSG R YD S M+ + G ++++G VVVAKNPCLHP
Sbjct: 718 GCLDETRTLEHGQVFVKFSGSRFRNLYDSS-DMFSERGRG-QCYLIKGSVVVAKNPCLHP 775
Query: 87 GDVRVLRAVNVPALHHMVDCVVFPQKGTR 1
GD+R+L+AV+VPALHHMVDCVVFPQKG R
Sbjct: 776 GDLRILKAVDVPALHHMVDCVVFPQKGPR 804
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 1014 bits (2623), Expect = 0.0
Identities = 528/802 (65%), Positives = 629/802 (78%), Gaps = 4/802 (0%)
Frame = -1
Query: 2394 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 2218
MGKTI + GF L SAE VK FLE +TG GTVYA+EVK+ K G A+AKVQF + SA
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60
Query: 2217 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 2038
II LA++ L+YG YLKA+E DIV + +T+V++M+ +TL+FGCQ+S +K++V K
Sbjct: 61 IIDLASKGLYYGPSYLKAWEMKTDIV---QPRTYVEHMDGVTLNFGCQISDKKFAVLGSK 117
Query: 2037 EDVTVKFGFGLKKIYFFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 1858
DV++KFG GLKKIYFFLSH S DYKLQLS+EN+WQ+ L P Q F+++QL GAPRI
Sbjct: 118 -DVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176
Query: 1857 FEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYKE 1681
+++ EDS YS+FKET DDQWVRTTDFTPS+ +G SS+LCLE NGV++P+FSE YKE
Sbjct: 177 YKRLEDSCYSFFKETPDDQWVRTTDFTPSW-IGLSSSLCLEFRNGVQLPNFSESFFYYKE 235
Query: 1680 NESQFILESGSTFS--QNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFY 1507
+ +QFIL++G TFS Q LVP++ P GI+LPY I FKI L+Q+G PG A++ NF+
Sbjct: 236 SMNQFILQTGFTFSFSQKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFF 295
Query: 1506 RLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGL 1327
+LVDPRR +IA IEHALEKL +LK CCYDPV+W EQY +Y RQ KSP I LD GL
Sbjct: 296 QLVDPRRR-NIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPPITLDDGL 354
Query: 1326 VYFHSVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIA 1147
VY V +TPC+VY+CGPEVNVSNRVLR Y +DI+NF+RVSF+DEEW+K++STDL PR +
Sbjct: 355 VYVRRVVVTPCKVYFCGPEVNVSNRVLRNYSEDINNFLRVSFVDEEWEKIHSTDLLPRAS 414
Query: 1146 TVNGERRTAIYKRILSTLRNGIVIGDKKFDFLAFSSSQLRDNSAWMFASTTSLSACDIRR 967
T NG R T IY+RILSTLRNG +IGDK+F+FLAFSSSQLRDNS WMFAS L+A DIR
Sbjct: 415 TGNGTR-TDIYERILSTLRNGFIIGDKRFEFLAFSSSQLRDNSVWMFASRPGLTANDIRT 473
Query: 966 WMGDFSRIRNVAKYAARLGQSFSSSTETLSVRKXXXXXIPDVEVVKGKTKYIFSDGIGKI 787
WMGDF +IRNVAKYAARLGQSF SS ETLSV + IPDV T YIFSDGIGKI
Sbjct: 474 WMGDFRQIRNVAKYAARLGQSFGSSRETLSVGRHEVEVIPDVACSLHGTNYIFSDGIGKI 533
Query: 786 SADFARNVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPTXXXXXXXXXXXXKFESDNIGLD 607
SADFA V IKCGL+ TPS+FQIRYGGYKGVVAVDP K+ES+NI LD
Sbjct: 534 SADFAHRVTIKCGLQY-TPSSFQIRYGGYKGVVAVDPYSSMKLSLRKSMLKYESNNIKLD 592
Query: 606 VLAWSKYQPCFLNRQLISLLSTLGVKDHVFEKKQKEAVDQMDMILKDPLRAQEALDLMYP 427
VL WSKYQPC+LNRQL++LLSTLGV D V E+KQ EAVDQ+D IL D L+AQEAL+LM P
Sbjct: 593 VLGWSKYQPCYLNRQLVTLLSTLGVIDDVLEQKQNEAVDQLDAILHDSLKAQEALELMSP 652
Query: 426 GENANILKDMLSCGYKPDAEPFLSMMLQTFRASKLLDLRIKTRIFVRGGRSMMGCLDETR 247
GEN NILK+ML+CGY PDAEPFLSMMLQTFRASKLLDLR +TRIF+ GR+MMGCLDE+R
Sbjct: 653 GENTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPNGRTMMGCLDESR 712
Query: 246 TLEYGQVFVQFSGYGRRAFYDDSLLMYGDSGLDHHTHIVEGKVVVAKNPCLHPGDVRVLR 67
TLEYGQVFVQFSG GRR F+++S + DSG + I++G VVVAKNPCLHPGD+RVLR
Sbjct: 713 TLEYGQVFVQFSGAGRRQFFEES-HPFNDSGSANCDFILKGNVVVAKNPCLHPGDIRVLR 771
Query: 66 AVNVPALHHMVDCVVFPQKGTR 1
AV+VPALHHMVDCVVFPQKG R
Sbjct: 772 AVDVPALHHMVDCVVFPQKGKR 793
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 1009 bits (2610), Expect = 0.0
Identities = 529/803 (65%), Positives = 627/803 (78%), Gaps = 5/803 (0%)
Frame = -1
Query: 2394 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 2218
MGKTI + GF L SAE VK FLE +TG GTVYA+EVK+ K G A+AKVQF + SA
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEI 60
Query: 2217 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 2038
II LA++ L+YG YLKA+E IV + +T+V +M+ +TL+FGCQ+S +K++V K
Sbjct: 61 IIDLASKGLYYGPSYLKAWEMKTYIV---QPRTYVQHMDGVTLNFGCQISDKKFAVLGSK 117
Query: 2037 EDVTVKFGFGLKKIYFFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 1858
V++KFG GLKKIYFFLS+ S DYKLQLS+EN+WQ+ L P Q F+++QLSGAPRI
Sbjct: 118 V-VSIKFGIGLKKIYFFLSYGSTDYKLQLSYENIWQVVLHRPYGQKAQFLLLQLSGAPRI 176
Query: 1857 FEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYKE 1681
+++ EDS YS+FKET DDQWVRTTDFTPS+ +G SS+LCLE NGV +P+FSE YKE
Sbjct: 177 YKRLEDSCYSFFKETPDDQWVRTTDFTPSW-IGLSSSLCLEFHNGVRLPNFSESFFYYKE 235
Query: 1680 NESQFILESGSTFSQNSD---LVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNF 1510
+ +Q IL++G TFS + LVP++ P GI+LPY I FKI L+Q+G PG A++ NF
Sbjct: 236 SANQVILQTGFTFSFSQKKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNF 295
Query: 1509 YRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSG 1330
++LVDPRR +IA IEHALEKL +LK CCYDPV+W EQY +Y RQ KSP+I LD G
Sbjct: 296 FQLVDPRRR-NIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDG 354
Query: 1329 LVYFHSVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRI 1150
LVY V +TPC+VY+CGPEVNVSNRVLR Y +DIDNF+RVSF+DEEW+K++STDL PR
Sbjct: 355 LVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKIHSTDLLPRA 414
Query: 1149 ATVNGERRTAIYKRILSTLRNGIVIGDKKFDFLAFSSSQLRDNSAWMFASTTSLSACDIR 970
+T NG R T IY RILSTLRNG VIGDKKF+FLAFSSSQLRDNS WMFAS L+A DIR
Sbjct: 415 STGNGVR-TDIYLRILSTLRNGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIR 473
Query: 969 RWMGDFSRIRNVAKYAARLGQSFSSSTETLSVRKXXXXXIPDVEVVKGKTKYIFSDGIGK 790
WMG F +IRNVAKYAARLGQSF SS ETLSV + IPDV T YIFSDGIGK
Sbjct: 474 TWMGGFQQIRNVAKYAARLGQSFGSSRETLSVGRHEVEVIPDVVCSLHGTNYIFSDGIGK 533
Query: 789 ISADFARNVAIKCGLKSSTPSAFQIRYGGYKGVVAVDPTXXXXXXXXXXXXKFESDNIGL 610
ISADFAR VA+KCGL+ TPS FQIRYGGYKGVVAVDP K+ES+NI L
Sbjct: 534 ISADFARRVAVKCGLQY-TPSCFQIRYGGYKGVVAVDPYSSMKLSLRNSMLKYESNNIKL 592
Query: 609 DVLAWSKYQPCFLNRQLISLLSTLGVKDHVFEKKQKEAVDQMDMILKDPLRAQEALDLMY 430
DVL WSKYQPC+LNRQL++LLSTLGVKD VFE+KQ EAVDQ+D IL D L+AQEAL+LM
Sbjct: 593 DVLGWSKYQPCYLNRQLVTLLSTLGVKDDVFEQKQNEAVDQLDAILHDTLKAQEALELMS 652
Query: 429 PGENANILKDMLSCGYKPDAEPFLSMMLQTFRASKLLDLRIKTRIFVRGGRSMMGCLDET 250
PGEN NILK+ML+CGY PDAEPFLSMMLQTFRASKLLDLR ++RIF+ GR+MMGCLDE+
Sbjct: 653 PGENTNILKEMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDES 712
Query: 249 RTLEYGQVFVQFSGYGRRAFYDDSLLMYGDSGLDHHTHIVEGKVVVAKNPCLHPGDVRVL 70
RTLEYGQVFVQF+G GRR FY++S + DSG + I+EG VVVAKNPCLHPGD+RVL
Sbjct: 713 RTLEYGQVFVQFTGTGRRQFYEES-HPFNDSGSTNCDFILEGNVVVAKNPCLHPGDIRVL 771
Query: 69 RAVNVPALHHMVDCVVFPQKGTR 1
RAV+VPALHHMVDCVVFPQKG R
Sbjct: 772 RAVDVPALHHMVDCVVFPQKGKR 794