BLASTX nr result

ID: Panax21_contig00020313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020313
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI75147.1| malate dehydrogenase [Citrus junos]                    132   2e-29
ref|XP_002514750.1| malate dehydrogenase, putative [Ricinus comm...   132   3e-29
ref|XP_002284909.1| PREDICTED: malate dehydrogenase, chloroplast...   129   2e-28
ref|XP_002330960.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002331279.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26

>gb|ABI75147.1| malate dehydrogenase [Citrus junos]
          Length = 412

 Score =  132 bits (333), Expect = 2e-29
 Identities = 76/128 (59%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
 Frame = +2

Query: 86  MAATT-TTFSIGSALYYGSKANPLSQSKAFGVRYNSKNNLIRSFSGLKVATTIXXXXXXX 262
           MAAT+ TTFSI S + +G KA  L QSK  GVR+NSK +L+ SFSGLK  T++       
Sbjct: 1   MAATSATTFSITSTIAFGPKAGQLPQSKPSGVRFNSKKSLV-SFSGLKAVTSVICESDTS 59

Query: 263 XXXXXXXAALRASFVGKAQNQNQRASANLQIESSFKVAVLGAAGGIGQPLALLIKMSPLV 442
                  +ALR++F  KAQ+  QR    LQ ++SFKVAVLGAAGGIGQPLALLIKMSPLV
Sbjct: 60  FLNKESCSALRSTFARKAQSSEQRPQNALQPQASFKVAVLGAAGGIGQPLALLIKMSPLV 119

Query: 443 SALHLYDI 466
           SALHLYD+
Sbjct: 120 SALHLYDV 127


>ref|XP_002514750.1| malate dehydrogenase, putative [Ricinus communis]
           gi|223546354|gb|EEF47856.1| malate dehydrogenase,
           putative [Ricinus communis]
          Length = 412

 Score =  132 bits (332), Expect = 3e-29
 Identities = 72/129 (55%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
 Frame = +2

Query: 86  MAATTT-TFSIGSALYYGSKANPLSQSKAFGVRYNSKNNLIRSFSGLKVATTIXXXXXXX 262
           MAAT+  TFSIGSA+ +G KA+ L QSK+  VR+NS+N+++ SFS LK +T++       
Sbjct: 1   MAATSAATFSIGSAVSFGPKASQLPQSKSLAVRFNSQNSIV-SFSNLKASTSVNFESESS 59

Query: 263 XXXXXXXAALRASFVGKAQNQNQRASANLQIESSFKVAVLGAAGGIGQPLALLIKMSPLV 442
                   ALR SF  KA   +QR+   L +++S+KVA+LGAAGGIGQPLALL+KMSPLV
Sbjct: 60  FFGKESTMALRGSFATKAHKSSQRSQYQLNLQASYKVAILGAAGGIGQPLALLVKMSPLV 119

Query: 443 SALHLYDIA 469
           SALHLYDIA
Sbjct: 120 SALHLYDIA 128


>ref|XP_002284909.1| PREDICTED: malate dehydrogenase, chloroplastic [Vitis vinifera]
          Length = 413

 Score =  129 bits (324), Expect = 2e-28
 Identities = 81/130 (62%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
 Frame = +2

Query: 86  MAATT-TTFSIGSALYYGSKANPLSQSKAFGVRYNSKNNLIRSFSGLKVATTIXXXXXXX 262
           MAAT+ TT +IGS+   GSKA PLS+SK FGV +NS+N L +SFSGLK A++I       
Sbjct: 1   MAATSLTTITIGSSASIGSKAIPLSRSKCFGVSFNSQNYL-KSFSGLKAASSISCESEAS 59

Query: 263 XXXXXXXAALRASFVGKAQNQNQRASANLQIE-SSFKVAVLGAAGGIGQPLALLIKMSPL 439
                  AALR SF  KA  QN R    LQ + SS KVA+LGAAGGIGQPLALLIKMSPL
Sbjct: 60  FLGKESSAALRNSFAPKAGKQNLRHQYYLQPQASSSKVAILGAAGGIGQPLALLIKMSPL 119

Query: 440 VSALHLYDIA 469
           VSALHLYDIA
Sbjct: 120 VSALHLYDIA 129


>ref|XP_002330960.1| predicted protein [Populus trichocarpa] gi|222873154|gb|EEF10285.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  128 bits (322), Expect = 4e-28
 Identities = 72/127 (56%), Positives = 88/127 (69%)
 Frame = +2

Query: 89  AATTTTFSIGSALYYGSKANPLSQSKAFGVRYNSKNNLIRSFSGLKVATTIXXXXXXXXX 268
           AA+  TFS+GS   +G+KA+ L QSK   VR+NS+++L  +FSGLK AT +         
Sbjct: 3   AASAATFSVGSTFSFGTKASQLPQSKLSSVRFNSQSSLA-TFSGLKAATFVTCESESSFL 61

Query: 269 XXXXXAALRASFVGKAQNQNQRASANLQIESSFKVAVLGAAGGIGQPLALLIKMSPLVSA 448
                AALR S   KAQ  +QR+   L  ++S+KVAVLGAAGGIGQPLALLIKMSPLVSA
Sbjct: 62  GKESNAALRCSVAPKAQKSSQRSQHRLNPQASYKVAVLGAAGGIGQPLALLIKMSPLVSA 121

Query: 449 LHLYDIA 469
           LHLYDIA
Sbjct: 122 LHLYDIA 128


>ref|XP_002331279.1| predicted protein [Populus trichocarpa] gi|222873704|gb|EEF10835.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  124 bits (310), Expect = 1e-26
 Identities = 71/129 (55%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
 Frame = +2

Query: 86  MAATTT-TFSIGSALYYGSKANPLSQSKAFGVRYNSKNNLIRSFSGLKVATTIXXXXXXX 262
           MAAT+  TFS GS + +G+KA+ L QSK   VR+ S+ +L  +FSGLK AT +       
Sbjct: 1   MAATSAATFSAGSTVAFGTKASQLPQSKPSAVRFKSQKSLA-TFSGLKAATFVKCESESS 59

Query: 263 XXXXXXXAALRASFVGKAQNQNQRASANLQIESSFKVAVLGAAGGIGQPLALLIKMSPLV 442
                  AALR S V KAQ  +Q++  +L  ++S+KVA+LGAAGGIGQPLALL+KMSPLV
Sbjct: 60  FLGKESSAALRGSVVPKAQKSSQKSQYHLNPQASYKVAILGAAGGIGQPLALLVKMSPLV 119

Query: 443 SALHLYDIA 469
           SALHLYDIA
Sbjct: 120 SALHLYDIA 128


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