BLASTX nr result

ID: Panax21_contig00020306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020306
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g...   129   2e-28
emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]   129   2e-28
ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g...   112   3e-23
ref|XP_002510906.1| ATP-dependent clp protease, putative [Ricinu...   107   1e-21
ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycin...   104   6e-21

>ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Vitis vinifera]
           gi|296084123|emb|CBI24511.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score =  129 bits (325), Expect = 2e-28
 Identities = 76/128 (59%), Positives = 89/128 (69%), Gaps = 3/128 (2%)
 Frame = -2

Query: 376 TFSLLPISPSPSQHSCCVQQPNHWSLKLG---HNNTLINTFVGPKLSIRYSNSWQYTPIH 206
           + SLLPIS        C + PN  +  L    H N L ++ +G KLSI+ S+S       
Sbjct: 5   SLSLLPIS--------CHRNPNDPASPLLLSLHKNGLFSSLIGQKLSIQSSHSRLVVSTR 56

Query: 205 RSSTVATISFSLPTAKPDQVSSGKSPKWSARAIKSFAMAELEARKLKFPNTGTEALLMGI 26
             STVAT+  SLPTAKP++ SS K PKWSARAIKSF+MAELEARKLK+PNTGTEALLMGI
Sbjct: 57  YRSTVATVLLSLPTAKPERTSSEKVPKWSARAIKSFSMAELEARKLKYPNTGTEALLMGI 116

Query: 25  LVEGTSLA 2
           LVEGTSLA
Sbjct: 117 LVEGTSLA 124


>emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]
          Length = 231

 Score =  129 bits (324), Expect = 2e-28
 Identities = 76/128 (59%), Positives = 89/128 (69%), Gaps = 3/128 (2%)
 Frame = -2

Query: 376 TFSLLPISPSPSQHSCCVQQPNHWSLKLG---HNNTLINTFVGPKLSIRYSNSWQYTPIH 206
           + SLLPIS        C + PN  +  L    H N L ++ +G KLSI+ S+S       
Sbjct: 5   SLSLLPIS--------CHRNPNDPASPLLLSLHKNGLXSSLIGQKLSIQSSHSRLVVSTR 56

Query: 205 RSSTVATISFSLPTAKPDQVSSGKSPKWSARAIKSFAMAELEARKLKFPNTGTEALLMGI 26
             STVAT+  SLPTAKP++ SS K PKWSARAIKSF+MAELEARKLK+PNTGTEALLMGI
Sbjct: 57  YRSTVATVLLSLPTAKPERTSSEKVPKWSARAIKSFSMAELEARKLKYPNTGTEALLMGI 116

Query: 25  LVEGTSLA 2
           LVEGTSLA
Sbjct: 117 LVEGTSLA 124


>ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Cucumis sativus]
           gi|449499662|ref|XP_004160878.1| PREDICTED: clp
           protease-related protein At4g12060, chloroplastic-like
           [Cucumis sativus]
          Length = 234

 Score =  112 bits (280), Expect = 3e-23
 Identities = 69/128 (53%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
 Frame = -2

Query: 376 TFSLLPISPSPSQHSCCVQQPNHWSLKLGHNNTL--INTFVGPKLSIRYSNSWQ-YTPIH 206
           +FS LP+S  PSQ +C           L H   L  ++  +  KL+I+ SN+        
Sbjct: 10  SFSPLPLS-LPSQSNCH---------SLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFS 59

Query: 205 RSSTVATISFSLPTAKPDQVSSGKSPKWSARAIKSFAMAELEARKLKFPNTGTEALLMGI 26
           R +T AT+SFSLP +KP+ V   K PKWSARAIKSFAM ELEARKLK+PNTGTEALLMGI
Sbjct: 60  RRATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 119

Query: 25  LVEGTSLA 2
           L+EGTS A
Sbjct: 120 LIEGTSTA 127


>ref|XP_002510906.1| ATP-dependent clp protease, putative [Ricinus communis]
           gi|223550021|gb|EEF51508.1| ATP-dependent clp protease,
           putative [Ricinus communis]
          Length = 227

 Score =  107 bits (267), Expect = 1e-21
 Identities = 67/125 (53%), Positives = 82/125 (65%)
 Frame = -2

Query: 376 TFSLLPISPSPSQHSCCVQQPNHWSLKLGHNNTLINTFVGPKLSIRYSNSWQYTPIHRSS 197
           TFS L IS   S+    V++P+H SL L      +++F G KL I+ SN   +      S
Sbjct: 5   TFSFLSISLPTSK--IYVEKPHHSSLLLP-----LSSFHGNKLLIKQSNFSNFVLKSHGS 57

Query: 196 TVATISFSLPTAKPDQVSSGKSPKWSARAIKSFAMAELEARKLKFPNTGTEALLMGILVE 17
           T AT+  SLPT +     SGK PKWSARAI+SF + ELEARKLK+PNTGTEALLMGIL+E
Sbjct: 58  TAATVLSSLPTKRHP---SGKIPKWSARAIRSFGLGELEARKLKYPNTGTEALLMGILIE 114

Query: 16  GTSLA 2
           GTS A
Sbjct: 115 GTSPA 119


>ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycine max]
           gi|255639105|gb|ACU19852.1| unknown [Glycine max]
          Length = 260

 Score =  104 bits (260), Expect = 6e-21
 Identities = 65/131 (49%), Positives = 85/131 (64%), Gaps = 2/131 (1%)
 Frame = -2

Query: 388 PMAATFSLLPISPSPSQHSCCVQQPNHWSLKLGHNNTLINTFVGPKLSI-RYSNSWQYTP 212
           PMA+  +L    P+ + HS     PN+      H      +  G ++++ R ++S +  P
Sbjct: 25  PMASIPTLSSPLPTITAHSSPHSNPNN------HCTLSPTSLFGTRITLLRATSSSRSLP 78

Query: 211 -IHRSSTVATISFSLPTAKPDQVSSGKSPKWSARAIKSFAMAELEARKLKFPNTGTEALL 35
             +  +T AT+SFSLPT KP   +  K+PKWSARAIKS+AM ELEARKLK+PNTGTEALL
Sbjct: 79  NTNCRATSATVSFSLPTPKPLSDTPEKTPKWSARAIKSYAMGELEARKLKYPNTGTEALL 138

Query: 34  MGILVEGTSLA 2
           MGILVEGTS A
Sbjct: 139 MGILVEGTSKA 149