BLASTX nr result

ID: Panax21_contig00020305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020305
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g...   301   1e-79
emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]   301   2e-79
ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g...   281   2e-73
ref|XP_002510906.1| ATP-dependent clp protease, putative [Ricinu...   275   1e-71
ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycin...   271   2e-70

>ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g12060, chloroplastic-like
            [Vitis vinifera] gi|296084123|emb|CBI24511.3| unnamed
            protein product [Vitis vinifera]
          Length = 231

 Score =  301 bits (772), Expect = 1e-79
 Identities = 155/236 (65%), Positives = 191/236 (80%)
 Frame = -3

Query: 1016 MAAHTFSLLPISPSPSQHSCFVQPPNHWSLKLGHNNTLINTFVGPNLSIRSSNSWQYIPI 837
            M+ H+ SLLPIS   + +     P +   L L H N L ++ +G  LSI+SS+S   +  
Sbjct: 1    MSTHSLSLLPISCHRNPND----PASPLLLSL-HKNGLFSSLIGQKLSIQSSHSRLVVST 55

Query: 836  HRSSTVATISFSLPTAKPDQVSSGKSPKWSARAIKSFAMAELEARKLKFPNTGTEALLMG 657
               STVAT+  SLPTAKP++ SS K PKWSARAIKSF+MAELEARKLK+PNTGTEALLMG
Sbjct: 56   RYRSTVATVLLSLPTAKPERTSSEKVPKWSARAIKSFSMAELEARKLKYPNTGTEALLMG 115

Query: 656  ILVEGTSLAVKFLRENGISLFKVREETVKLLGRSDMYFFSPEHPPLTEPAQRALDWAINE 477
            ILVEGTSLA KFLR NGI+LFKVREETV LLG+SD+YFFSPEHPPLTEPAQRALDWA++E
Sbjct: 116  ILVEGTSLAAKFLRANGITLFKVREETVNLLGKSDLYFFSPEHPPLTEPAQRALDWAVDE 175

Query: 476  KLKSGETGEVTTTHFLLGIWSEKESAGYKILSELGFDDEKSKEIAKSMDKDFVFSF 309
            K+KSGE GE+TT+H LLGIW+E+ESAG+KIL+ LGF+D+++KE+AKS++K+   SF
Sbjct: 176  KIKSGEEGEITTSHLLLGIWAEEESAGHKILATLGFNDDQAKELAKSINKETDLSF 231


>emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]
          Length = 231

 Score =  301 bits (771), Expect = 2e-79
 Identities = 155/236 (65%), Positives = 191/236 (80%)
 Frame = -3

Query: 1016 MAAHTFSLLPISPSPSQHSCFVQPPNHWSLKLGHNNTLINTFVGPNLSIRSSNSWQYIPI 837
            M+ H+ SLLPIS   + +     P +   L L H N L ++ +G  LSI+SS+S   +  
Sbjct: 1    MSTHSLSLLPISCHRNPND----PASPLLLSL-HKNGLXSSLIGQKLSIQSSHSRLVVST 55

Query: 836  HRSSTVATISFSLPTAKPDQVSSGKSPKWSARAIKSFAMAELEARKLKFPNTGTEALLMG 657
               STVAT+  SLPTAKP++ SS K PKWSARAIKSF+MAELEARKLK+PNTGTEALLMG
Sbjct: 56   RYRSTVATVLLSLPTAKPERTSSEKVPKWSARAIKSFSMAELEARKLKYPNTGTEALLMG 115

Query: 656  ILVEGTSLAVKFLRENGISLFKVREETVKLLGRSDMYFFSPEHPPLTEPAQRALDWAINE 477
            ILVEGTSLA KFLR NGI+LFKVREETV LLG+SD+YFFSPEHPPLTEPAQRALDWA++E
Sbjct: 116  ILVEGTSLAAKFLRANGITLFKVREETVNLLGKSDLYFFSPEHPPLTEPAQRALDWAVDE 175

Query: 476  KLKSGETGEVTTTHFLLGIWSEKESAGYKILSELGFDDEKSKEIAKSMDKDFVFSF 309
            K+KSGE GE+TT+H LLGIW+E+ESAG+KIL+ LGF+D+++KE+AKS++K+   SF
Sbjct: 176  KIKSGEEGEITTSHLLLGIWAEEESAGHKILATLGFNDDQAKELAKSINKETDLSF 231


>ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g12060, chloroplastic-like
            [Cucumis sativus] gi|449499662|ref|XP_004160878.1|
            PREDICTED: clp protease-related protein At4g12060,
            chloroplastic-like [Cucumis sativus]
          Length = 234

 Score =  281 bits (720), Expect = 2e-73
 Identities = 154/244 (63%), Positives = 182/244 (74%), Gaps = 7/244 (2%)
 Frame = -3

Query: 1016 MAAHTFSLLPISPSP----SQHSCFVQPPNHWSLKLGHNNTL--INTFVGPNLSIRSSNS 855
            MAA  F+ L  SP P    SQ +C           L H   L  ++  +   L+I+ SN+
Sbjct: 1    MAATRFNSLSFSPLPLSLPSQSNCH---------SLEHKPPLFPLSPLIQLKLAIKRSNA 51

Query: 854  WQ-YIPIHRSSTVATISFSLPTAKPDQVSSGKSPKWSARAIKSFAMAELEARKLKFPNTG 678
                +   R +T AT+SFSLP +KP+ V   K PKWSARAIKSFAM ELEARKLK+PNTG
Sbjct: 52   THPVLKFSRRATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTG 111

Query: 677  TEALLMGILVEGTSLAVKFLRENGISLFKVREETVKLLGRSDMYFFSPEHPPLTEPAQRA 498
            TEALLMGIL+EGTS A KFLR NGI+LFKVREETVKLLG++DMYF SPEHPPLTEPAQ+A
Sbjct: 112  TEALLMGILIEGTSTAAKFLRANGITLFKVREETVKLLGKADMYFCSPEHPPLTEPAQKA 171

Query: 497  LDWAINEKLKSGETGEVTTTHFLLGIWSEKESAGYKILSELGFDDEKSKEIAKSMDKDFV 318
            LDWA+ EKLKSG++GE+TT H LLGIWSE ESAG KIL+ LGFDDEK+KEIAK++DKD  
Sbjct: 172  LDWAVAEKLKSGQSGEITTGHLLLGIWSE-ESAGRKILATLGFDDEKAKEIAKTVDKDAT 230

Query: 317  FSFK 306
            FS+K
Sbjct: 231  FSYK 234


>ref|XP_002510906.1| ATP-dependent clp protease, putative [Ricinus communis]
            gi|223550021|gb|EEF51508.1| ATP-dependent clp protease,
            putative [Ricinus communis]
          Length = 227

 Score =  275 bits (703), Expect = 1e-71
 Identities = 147/237 (62%), Positives = 178/237 (75%)
 Frame = -3

Query: 1016 MAAHTFSLLPISPSPSQHSCFVQPPNHWSLKLGHNNTLINTFVGPNLSIRSSNSWQYIPI 837
            MA  TFS L IS   S+   +V+ P+H SL L      +++F G  L I+ SN   ++  
Sbjct: 1    MATQTFSFLSISLPTSK--IYVEKPHHSSLLLP-----LSSFHGNKLLIKQSNFSNFVLK 53

Query: 836  HRSSTVATISFSLPTAKPDQVSSGKSPKWSARAIKSFAMAELEARKLKFPNTGTEALLMG 657
               ST AT+  SLPT +     SGK PKWSARAI+SF + ELEARKLK+PNTGTEALLMG
Sbjct: 54   SHGSTAATVLSSLPTKRHP---SGKIPKWSARAIRSFGLGELEARKLKYPNTGTEALLMG 110

Query: 656  ILVEGTSLAVKFLRENGISLFKVREETVKLLGRSDMYFFSPEHPPLTEPAQRALDWAINE 477
            IL+EGTS A KFLR NGI+ F+VREETV LLG+SD+Y+FSPEHPPLTE AQRALDWAI+E
Sbjct: 111  ILIEGTSPAAKFLRANGITFFEVREETVNLLGKSDLYYFSPEHPPLTEQAQRALDWAIDE 170

Query: 476  KLKSGETGEVTTTHFLLGIWSEKESAGYKILSELGFDDEKSKEIAKSMDKDFVFSFK 306
            KLKSG+ GE+TTTH LLGIWSE ESAG+K++  LGF+DEK+KE+AKSM+ D V S K
Sbjct: 171  KLKSGDDGEITTTHILLGIWSEIESAGHKVMETLGFNDEKAKELAKSMNGDVVLSSK 227


>ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycine max]
            gi|255639105|gb|ACU19852.1| unknown [Glycine max]
          Length = 260

 Score =  271 bits (694), Expect = 2e-70
 Identities = 153/255 (60%), Positives = 189/255 (74%), Gaps = 2/255 (0%)
 Frame = -3

Query: 1061 TSHH-LGLRVLGFIQTMAAHTFSLLPISPSPSQHSCFVQPPNHWSLKLGHNNTLINTFVG 885
            TSH  L L  +  I T+++    L  I+   S HS    P NH +L      +L  T + 
Sbjct: 16   TSHFSLHLLPMASIPTLSS---PLPTITAHSSPHS---NPNNHCTLS---PTSLFGTRI- 65

Query: 884  PNLSIRSSNSWQYIP-IHRSSTVATISFSLPTAKPDQVSSGKSPKWSARAIKSFAMAELE 708
                +R+++S + +P  +  +T AT+SFSLPT KP   +  K+PKWSARAIKS+AM ELE
Sbjct: 66   --TLLRATSSSRSLPNTNCRATSATVSFSLPTPKPLSDTPEKTPKWSARAIKSYAMGELE 123

Query: 707  ARKLKFPNTGTEALLMGILVEGTSLAVKFLRENGISLFKVREETVKLLGRSDMYFFSPEH 528
            ARKLK+PNTGTEALLMGILVEGTS A KFLR NGI+LFKVREETV+LLG+SD+YFFSPEH
Sbjct: 124  ARKLKYPNTGTEALLMGILVEGTSKAAKFLRANGITLFKVREETVELLGKSDLYFFSPEH 183

Query: 527  PPLTEPAQRALDWAINEKLKSGETGEVTTTHFLLGIWSEKESAGYKILSELGFDDEKSKE 348
            PPLTEPAQ+ALDWAI EKLKSGE GE++ TH LLGIWS+KESAG +IL  LGF+DEK+KE
Sbjct: 184  PPLTEPAQKALDWAIEEKLKSGEGGEISVTHLLLGIWSQKESAGQQILDTLGFNDEKAKE 243

Query: 347  IAKSMDKDFVFSFKK 303
            +AK++D D   SFK+
Sbjct: 244  LAKTIDGDVDLSFKR 258


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