BLASTX nr result

ID: Panax21_contig00020298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020298
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago t...   190   2e-46
ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...   189   4e-46
emb|CBI30553.3| unnamed protein product [Vitis vinifera]              189   4e-46
ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   188   5e-46
ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   186   2e-45

>ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago truncatula]
            gi|355498141|gb|AES79344.1| E3 ubiquitin-protein ligase
            ubr1 [Medicago truncatula]
          Length = 2105

 Score =  190 bits (482), Expect = 2e-46
 Identities = 92/117 (78%), Positives = 100/117 (85%)
 Frame = -1

Query: 352  EMLSLIIQIVKERRICGITPVECLRRELIYKLSTGDTTHSQLVKSLPCDLSKVGEFQEIL 173
            EML+LIIQIVKERR CG+   E L+RELIYKLS GD THSQLVKSLP DLSK  + Q++L
Sbjct: 803  EMLTLIIQIVKERRFCGLNTAESLKRELIYKLSIGDATHSQLVKSLPRDLSKFDKLQDVL 862

Query: 172  DTVAEYSNPSGINQGMYKLRLAYWKELDLYHPRWNSRDLQVAEERYLRFCNVSALAT 2
            DTVAEYSNPSG NQGMY LR   WKELDLYHPRWNS+DLQVAEERYLRFC+VSAL T
Sbjct: 863  DTVAEYSNPSGFNQGMYSLRWLLWKELDLYHPRWNSKDLQVAEERYLRFCSVSALTT 919


>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score =  189 bits (479), Expect = 4e-46
 Identities = 90/117 (76%), Positives = 100/117 (85%)
 Frame = -1

Query: 352  EMLSLIIQIVKERRICGITPVECLRRELIYKLSTGDTTHSQLVKSLPCDLSKVGEFQEIL 173
            EML+LIIQ+VKERR CG+T  E L+RELIYKL+ G+ THSQLVKSLP DLSK+ + QEIL
Sbjct: 836  EMLTLIIQLVKERRFCGLTTTESLKRELIYKLAIGNATHSQLVKSLPRDLSKIDQLQEIL 895

Query: 172  DTVAEYSNPSGINQGMYKLRLAYWKELDLYHPRWNSRDLQVAEERYLRFCNVSALAT 2
            DT+A YS PSG+NQGMY LR AYWKELDLYHPRWN RDLQ AEERY RFCNVSAL T
Sbjct: 896  DTIALYSEPSGVNQGMYSLRQAYWKELDLYHPRWNPRDLQFAEERYSRFCNVSALTT 952


>emb|CBI30553.3| unnamed protein product [Vitis vinifera]
          Length = 1254

 Score =  189 bits (479), Expect = 4e-46
 Identities = 90/117 (76%), Positives = 100/117 (85%)
 Frame = -1

Query: 352 EMLSLIIQIVKERRICGITPVECLRRELIYKLSTGDTTHSQLVKSLPCDLSKVGEFQEIL 173
           EML+LIIQ+VKERR CG+T  E L+RELIYKL+ G+ THSQLVKSLP DLSK+ + QEIL
Sbjct: 76  EMLTLIIQLVKERRFCGLTTTESLKRELIYKLAIGNATHSQLVKSLPRDLSKIDQLQEIL 135

Query: 172 DTVAEYSNPSGINQGMYKLRLAYWKELDLYHPRWNSRDLQVAEERYLRFCNVSALAT 2
           DT+A YS PSG+NQGMY LR AYWKELDLYHPRWN RDLQ AEERY RFCNVSAL T
Sbjct: 136 DTIALYSEPSGVNQGMYSLRQAYWKELDLYHPRWNPRDLQFAEERYSRFCNVSALTT 192


>ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2037

 Score =  188 bits (478), Expect = 5e-46
 Identities = 91/117 (77%), Positives = 101/117 (86%)
 Frame = -1

Query: 352  EMLSLIIQIVKERRICGITPVECLRRELIYKLSTGDTTHSQLVKSLPCDLSKVGEFQEIL 173
            EML+LIIQIVKERR  G+T  ECL+RELIYKLS GD THS LVKSLP DLSK  + Q+IL
Sbjct: 822  EMLTLIIQIVKERRFSGLTTAECLKRELIYKLSIGDATHSHLVKSLPRDLSKFEQLQDIL 881

Query: 172  DTVAEYSNPSGINQGMYKLRLAYWKELDLYHPRWNSRDLQVAEERYLRFCNVSALAT 2
            DTVA YSNPSG NQGM+ LR ++WKELDLYHPRWNS+DLQVAEERYLRFC+VSAL T
Sbjct: 882  DTVAVYSNPSGFNQGMFSLRWSFWKELDLYHPRWNSKDLQVAEERYLRFCSVSALTT 938


>ref|XP_003552169.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2036

 Score =  186 bits (473), Expect = 2e-45
 Identities = 90/117 (76%), Positives = 100/117 (85%)
 Frame = -1

Query: 352  EMLSLIIQIVKERRICGITPVECLRRELIYKLSTGDTTHSQLVKSLPCDLSKVGEFQEIL 173
            EML+LIIQIVKERR  G+T  ECL+RELIYKLS GD THSQLVKSLP DLSK  + Q+IL
Sbjct: 822  EMLTLIIQIVKERRFSGLTTAECLKRELIYKLSIGDATHSQLVKSLPRDLSKFEQLQDIL 881

Query: 172  DTVAEYSNPSGINQGMYKLRLAYWKELDLYHPRWNSRDLQVAEERYLRFCNVSALAT 2
            +TVA YSNPSG NQGMY LR  +WKELDLYHPRWNS+DLQVAEERY+ FC+VSAL T
Sbjct: 882  NTVAVYSNPSGFNQGMYSLRWPFWKELDLYHPRWNSKDLQVAEERYMHFCSVSALTT 938


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