BLASTX nr result

ID: Panax21_contig00020296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020296
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278337.1| PREDICTED: jmjC domain-containing protein 4-...   204   2e-98
ref|XP_002511357.1| transcription factor, putative [Ricinus comm...   194   4e-96
ref|XP_004155086.1| PREDICTED: jmjC domain-containing protein 4-...   197   8e-94
ref|XP_004138273.1| PREDICTED: jmjC domain-containing protein 4-...   197   8e-94
emb|CBI14986.3| unnamed protein product [Vitis vinifera]              188   1e-93

>ref|XP_002278337.1| PREDICTED: jmjC domain-containing protein 4-like [Vitis vinifera]
          Length = 493

 Score =  204 bits (518), Expect(2) = 2e-98
 Identities = 92/108 (85%), Positives = 97/108 (89%)
 Frame = -3

Query: 350 TWTPLHADVFRSYSWSANVCGRKQWYFLPPSQSHLVFDRNMKSSVYSIFEDVNETNFPCF 171
           TWTPLHADVFRSYSWSANVCG+K+W FLPPSQSHLVFDRNMKSSVY+I EDVNE  FP F
Sbjct: 182 TWTPLHADVFRSYSWSANVCGKKKWLFLPPSQSHLVFDRNMKSSVYNICEDVNEAKFPGF 241

Query: 170 KQAKWLECTQEPNEIIFVPSGWYHQVHNLVDTISINHNWFNGYNLSCV 27
           K+A WLEC QE +EIIFVPSGWYHQVHNL DTISINHNWFN YNLS V
Sbjct: 242 KKAVWLECIQEQDEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWV 289



 Score =  181 bits (460), Expect(2) = 2e-98
 Identities = 90/134 (67%), Positives = 99/134 (73%), Gaps = 9/134 (6%)
 Frame = -2

Query: 753 GTPNLNFFSCNFGNSKVQVADCGTREFTDHKRIEMSVSEFIHQWLDLAQKDSDN------ 592
           G PNL FFS +FG S VQVADCGTREFTD KR+EMSV+EFI  WL    KDS N      
Sbjct: 53  GQPNLEFFSTHFGKSIVQVADCGTREFTDQKRMEMSVAEFIDHWL----KDSANYHVNAT 108

Query: 591 ---DLKSLLYLKDWHFVKEYPEYFAYTTPLFFCDDWLNMYLDKYHIHNDPNTCHEDVTEF 421
                K L+YLKDWHFVKEYPEY AYTTPLFF DDWLN+YLD Y +HN+P+ C E   E 
Sbjct: 109 TNEHGKPLVYLKDWHFVKEYPEYLAYTTPLFFRDDWLNLYLDNYSMHNEPDACQEK-NEI 167

Query: 420 NCSDYRFVYMGAKG 379
           +CSDYRFVYMGAKG
Sbjct: 168 SCSDYRFVYMGAKG 181


>ref|XP_002511357.1| transcription factor, putative [Ricinus communis]
           gi|223550472|gb|EEF51959.1| transcription factor,
           putative [Ricinus communis]
          Length = 462

 Score =  194 bits (493), Expect(2) = 4e-96
 Identities = 86/108 (79%), Positives = 95/108 (87%)
 Frame = -3

Query: 350 TWTPLHADVFRSYSWSANVCGRKQWYFLPPSQSHLVFDRNMKSSVYSIFEDVNETNFPCF 171
           +WTPLHADVFRSYSWSAN+CG+K+W FL PSQ HLVFDRNMK++VY+IFEDV+ET FP F
Sbjct: 177 SWTPLHADVFRSYSWSANICGKKKWIFLSPSQCHLVFDRNMKNTVYNIFEDVSETQFPGF 236

Query: 170 KQAKWLECTQEPNEIIFVPSGWYHQVHNLVDTISINHNWFNGYNLSCV 27
           K+A WLEC Q  NEIIFVPS WYHQVHNL DTISINHNWFN YNLS V
Sbjct: 237 KKAIWLECIQNQNEIIFVPSRWYHQVHNLEDTISINHNWFNAYNLSWV 284



 Score =  184 bits (466), Expect(2) = 4e-96
 Identities = 88/134 (65%), Positives = 104/134 (77%)
 Frame = -2

Query: 756 DGTPNLNFFSCNFGNSKVQVADCGTREFTDHKRIEMSVSEFIHQWLDLAQKDSDNDLKSL 577
           DG PNL FFS +FG S+VQVADCGTREFTD KR+EM+VSEFI  W++    + +++ KSL
Sbjct: 52  DGYPNLQFFSTHFGKSRVQVADCGTREFTDQKRVEMTVSEFIDHWIEYNASNHESNSKSL 111

Query: 576 LYLKDWHFVKEYPEYFAYTTPLFFCDDWLNMYLDKYHIHNDPNTCHEDVTEFNCSDYRFV 397
           LYLKDWHFVKEYPEY AY TPL FCDDWLN YLD Y +H +P+T  E+  E   SDYRFV
Sbjct: 112 LYLKDWHFVKEYPEYVAYRTPLPFCDDWLNPYLDHYRMHRNPDTYQEN-NEICSSDYRFV 170

Query: 396 YMGAKGLSADPLNS 355
           YMGAKG S  PL++
Sbjct: 171 YMGAKG-SWTPLHA 183


>ref|XP_004155086.1| PREDICTED: jmjC domain-containing protein 4-like [Cucumis sativus]
          Length = 480

 Score =  197 bits (501), Expect(2) = 8e-94
 Identities = 85/109 (77%), Positives = 97/109 (88%)
 Frame = -3

Query: 350 TWTPLHADVFRSYSWSANVCGRKQWYFLPPSQSHLVFDRNMKSSVYSIFEDVNETNFPCF 171
           +WTPLHADVFRSYSWSANVCG+KQW+ LPPSQSHLVFDRNMK+ +Y+IF+D++E  FP F
Sbjct: 183 SWTPLHADVFRSYSWSANVCGKKQWFLLPPSQSHLVFDRNMKACIYNIFDDISEYLFPGF 242

Query: 170 KQAKWLECTQEPNEIIFVPSGWYHQVHNLVDTISINHNWFNGYNLSCVV 24
           K+A WLEC QE NEIIFVPSGWYHQVHNL DT+SINHNWFN YNL  V+
Sbjct: 243 KKATWLECIQEQNEIIFVPSGWYHQVHNLDDTVSINHNWFNSYNLCWVL 291



 Score =  173 bits (438), Expect(2) = 8e-94
 Identities = 86/140 (61%), Positives = 107/140 (76%), Gaps = 6/140 (4%)
 Frame = -2

Query: 756 DGTPNLNFFSCNFGNSKVQVADCGTREFTDHKRIEMSVSEFIHQWLDLAQKD----SDND 589
           +G PNL+FFS +FG S+VQVADC T+EFTD KR+EMSVSEFI QW     ++    S+N 
Sbjct: 52  NGQPNLSFFSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNG 111

Query: 588 L--KSLLYLKDWHFVKEYPEYFAYTTPLFFCDDWLNMYLDKYHIHNDPNTCHEDVTEFNC 415
           L  KS+LYLKDWHFVKEY  Y AY+TP F CDDWLN+YLD Y +H DP++ +++  E +C
Sbjct: 112 LTDKSVLYLKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDS-YQEKDEISC 170

Query: 414 SDYRFVYMGAKGLSADPLNS 355
           SDYRFVYMGAKG S  PL++
Sbjct: 171 SDYRFVYMGAKG-SWTPLHA 189


>ref|XP_004138273.1| PREDICTED: jmjC domain-containing protein 4-like [Cucumis sativus]
          Length = 480

 Score =  197 bits (501), Expect(2) = 8e-94
 Identities = 85/109 (77%), Positives = 97/109 (88%)
 Frame = -3

Query: 350 TWTPLHADVFRSYSWSANVCGRKQWYFLPPSQSHLVFDRNMKSSVYSIFEDVNETNFPCF 171
           +WTPLHADVFRSYSWSANVCG+KQW+ LPPSQSHLVFDRNMK+ +Y+IF+D++E  FP F
Sbjct: 183 SWTPLHADVFRSYSWSANVCGKKQWFLLPPSQSHLVFDRNMKACIYNIFDDISEYLFPGF 242

Query: 170 KQAKWLECTQEPNEIIFVPSGWYHQVHNLVDTISINHNWFNGYNLSCVV 24
           K+A WLEC QE NEIIFVPSGWYHQVHNL DT+SINHNWFN YNL  V+
Sbjct: 243 KKATWLECIQEQNEIIFVPSGWYHQVHNLDDTVSINHNWFNSYNLCWVL 291



 Score =  173 bits (438), Expect(2) = 8e-94
 Identities = 86/140 (61%), Positives = 107/140 (76%), Gaps = 6/140 (4%)
 Frame = -2

Query: 756 DGTPNLNFFSCNFGNSKVQVADCGTREFTDHKRIEMSVSEFIHQWLDLAQKD----SDND 589
           +G PNL+FFS +FG S+VQVADC T+EFTD KR+EMSVSEFI QW     ++    S+N 
Sbjct: 52  NGQPNLSFFSTHFGKSRVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNG 111

Query: 588 L--KSLLYLKDWHFVKEYPEYFAYTTPLFFCDDWLNMYLDKYHIHNDPNTCHEDVTEFNC 415
           L  KS+LYLKDWHFVKEY  Y AY+TP F CDDWLN+YLD Y +H DP++ +++  E +C
Sbjct: 112 LTDKSVLYLKDWHFVKEYLNYTAYSTPHFVCDDWLNLYLDSYRMHRDPDS-YQEKDEISC 170

Query: 414 SDYRFVYMGAKGLSADPLNS 355
           SDYRFVYMGAKG S  PL++
Sbjct: 171 SDYRFVYMGAKG-SWTPLHA 189


>emb|CBI14986.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  188 bits (477), Expect(2) = 1e-93
 Identities = 88/113 (77%), Positives = 94/113 (83%), Gaps = 5/113 (4%)
 Frame = -3

Query: 350 TWTPLHADVFRSYSWSANVCGRKQWYFLPPSQSHLVFDRNMKS-----SVYSIFEDVNET 186
           TWTPLHADVFRSYSWSANVCG+K+W FLPPSQSHLVFDR+        SVY+I EDVNE 
Sbjct: 182 TWTPLHADVFRSYSWSANVCGKKKWLFLPPSQSHLVFDRHEYVFLHIYSVYNICEDVNEA 241

Query: 185 NFPCFKQAKWLECTQEPNEIIFVPSGWYHQVHNLVDTISINHNWFNGYNLSCV 27
            FP FK+A WLEC QE +EIIFVPSGWYHQVHNL DTISINHNWFN YNLS V
Sbjct: 242 KFPGFKKAVWLECIQEQDEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWV 294



 Score =  181 bits (460), Expect(2) = 1e-93
 Identities = 90/134 (67%), Positives = 99/134 (73%), Gaps = 9/134 (6%)
 Frame = -2

Query: 753 GTPNLNFFSCNFGNSKVQVADCGTREFTDHKRIEMSVSEFIHQWLDLAQKDSDN------ 592
           G PNL FFS +FG S VQVADCGTREFTD KR+EMSV+EFI  WL    KDS N      
Sbjct: 53  GQPNLEFFSTHFGKSIVQVADCGTREFTDQKRMEMSVAEFIDHWL----KDSANYHVNAT 108

Query: 591 ---DLKSLLYLKDWHFVKEYPEYFAYTTPLFFCDDWLNMYLDKYHIHNDPNTCHEDVTEF 421
                K L+YLKDWHFVKEYPEY AYTTPLFF DDWLN+YLD Y +HN+P+ C E   E 
Sbjct: 109 TNEHGKPLVYLKDWHFVKEYPEYLAYTTPLFFRDDWLNLYLDNYSMHNEPDACQEK-NEI 167

Query: 420 NCSDYRFVYMGAKG 379
           +CSDYRFVYMGAKG
Sbjct: 168 SCSDYRFVYMGAKG 181


Top