BLASTX nr result

ID: Panax21_contig00020295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020295
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517663.1| signal recognition particle 54 kD protein, p...   493   e-137
ref|XP_004168204.1| PREDICTED: signal recognition particle 54 kD...   489   e-136
ref|XP_004152178.1| PREDICTED: signal recognition particle 54 kD...   489   e-136
ref|XP_002322968.1| predicted protein [Populus trichocarpa] gi|2...   489   e-136
emb|CBI36349.3| unnamed protein product [Vitis vinifera]              485   e-135

>ref|XP_002517663.1| signal recognition particle 54 kD protein, putative [Ricinus
           communis] gi|223543295|gb|EEF44827.1| signal recognition
           particle 54 kD protein, putative [Ricinus communis]
          Length = 497

 Score =  493 bits (1269), Expect = e-137
 Identities = 252/268 (94%), Positives = 253/268 (94%)
 Frame = +3

Query: 189 MVLAQLGGSISRALQQMSNATIIDEKVLNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 368
           MVLAQLGGSISRA+QQMSNATIIDEK LNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 369 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFAPKKGKPSVVMFVGLQGSGKTTTCTK 548
           NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSF PKKGK SVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 549 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 728
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 729 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSV 908
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG            SV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 909 AVGAVIVTKMDGHAKGGGALSAVAATKS 992
           AVGAVIVTKMDGHAKGGGALSAVAATKS
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKS 268


>ref|XP_004168204.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Cucumis sativus]
          Length = 392

 Score =  489 bits (1259), Expect = e-136
 Identities = 249/268 (92%), Positives = 254/268 (94%)
 Frame = +3

Query: 189 MVLAQLGGSISRALQQMSNATIIDEKVLNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 368
           MVLAQLGGSISRALQQMS+AT+IDEKVLN+CLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 369 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFAPKKGKPSVVMFVGLQGSGKTTTCTK 548
           NLDDLAAGHNKRKIIQQA+FNELCKMLDPGKPSF PKKGK SVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 549 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 728
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 729 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSV 908
           KE+CDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG            SV
Sbjct: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 909 AVGAVIVTKMDGHAKGGGALSAVAATKS 992
           AVGAVIVTKMDGHAKGGGALSAVAATKS
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKS 268


>ref|XP_004152178.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Cucumis sativus]
          Length = 495

 Score =  489 bits (1259), Expect = e-136
 Identities = 249/268 (92%), Positives = 254/268 (94%)
 Frame = +3

Query: 189 MVLAQLGGSISRALQQMSNATIIDEKVLNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 368
           MVLAQLGGSISRALQQMS+AT+IDEKVLN+CLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 369 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFAPKKGKPSVVMFVGLQGSGKTTTCTK 548
           NLDDLAAGHNKRKIIQQA+FNELCKMLDPGKPSF PKKGK SVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 549 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 728
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 729 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSV 908
           KE+CDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG            SV
Sbjct: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 909 AVGAVIVTKMDGHAKGGGALSAVAATKS 992
           AVGAVIVTKMDGHAKGGGALSAVAATKS
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKS 268


>ref|XP_002322968.1| predicted protein [Populus trichocarpa] gi|222867598|gb|EEF04729.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  489 bits (1259), Expect = e-136
 Identities = 249/268 (92%), Positives = 252/268 (94%)
 Frame = +3

Query: 189 MVLAQLGGSISRALQQMSNATIIDEKVLNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 368
           MVLA+LGGSISRA+QQMSNATIIDEK LNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAELGGSISRAIQQMSNATIIDEKALNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 369 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFAPKKGKPSVVMFVGLQGSGKTTTCTK 548
           NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSF PKKGK SVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 549 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 728
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 729 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSV 908
           KENCDLIIVDTSGRHKQE ALFEEMRQV+EATKPDLVIFVMDSSIG            SV
Sbjct: 181 KENCDLIIVDTSGRHKQEVALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 909 AVGAVIVTKMDGHAKGGGALSAVAATKS 992
           AVGAVIVTKMDGHAKGGGALSAVAATKS
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKS 268


>emb|CBI36349.3| unnamed protein product [Vitis vinifera]
          Length = 431

 Score =  485 bits (1249), Expect = e-135
 Identities = 246/268 (91%), Positives = 252/268 (94%)
 Frame = +3

Query: 189 MVLAQLGGSISRALQQMSNATIIDEKVLNDCLNEITRALLQSDVQFKLVRDMQTNIKKIV 368
           MVL++LGGSISRALQQMSNATIIDEKVLN+CLNEITRALLQSDVQFKLVRDMQTNIKK+V
Sbjct: 1   MVLSELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKLV 60

Query: 369 NLDDLAAGHNKRKIIQQAIFNELCKMLDPGKPSFAPKKGKPSVVMFVGLQGSGKTTTCTK 548
           N DDLAAGHNKRKIIQQAIF ELCKMLDPGKPSF PKKGK SVVMFVGLQGSGKTTTCTK
Sbjct: 61  NFDDLAAGHNKRKIIQQAIFQELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 549 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 728
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 729 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSV 908
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT+PDLVIFVMDSSIG            SV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATRPDLVIFVMDSSIGQAAFDQAQAFRQSV 240

Query: 909 AVGAVIVTKMDGHAKGGGALSAVAATKS 992
           AVGAVI+TKMDGHAKGGGALSAVAATKS
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKS 268


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