BLASTX nr result

ID: Panax21_contig00020278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020278
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301540.1| predicted protein [Populus trichocarpa] gi|2...   440   e-121
dbj|BAB92019.1| mitochondrial aldehyde dehydrogenase [Sorghum bi...   437   e-120
ref|NP_001105891.1| mitochondrial aldehyde dehydrogenase 2 [Zea ...   435   e-120
gb|AFW86313.1| restorer of fertility2 [Zea mays]                      435   e-120
gb|AAK58370.1|AF269064_1 T-cytoplasm male sterility restorer fac...   435   e-120

>ref|XP_002301540.1| predicted protein [Populus trichocarpa] gi|222843266|gb|EEE80813.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  440 bits (1132), Expect = e-121
 Identities = 206/239 (86%), Positives = 224/239 (93%)
 Frame = +1

Query: 1   VKSPVDVNYSQLLINGQFVDAVSGKTFPTLDPRTGDVIAQVSEGDAEDINRAVAAARKAF 180
           +  PV V Y+QLLINGQFVDA SGKTFPTLDPRTG+VIA V+EGD ED+NRAV+AARKAF
Sbjct: 51  ITPPVSVKYNQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDVEDVNRAVSAARKAF 110

Query: 181 DEGPWPKLTAYERSRIMFRFADLLEKHNDEIAALETWDNGKPYEQSANIEIPMVARLFRY 360
           DEGPWP++TAYERSRI++RFADLLEKH DEIAALETWDNGKPYEQSA IEIPM  R+FRY
Sbjct: 111 DEGPWPRMTAYERSRIIWRFADLLEKHTDEIAALETWDNGKPYEQSAKIEIPMTVRIFRY 170

Query: 361 YAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNTVVL 540
           YAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFP+LM++WKVGPALACGNTVV+
Sbjct: 171 YAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPMLMFSWKVGPALACGNTVVI 230

Query: 541 KTAEQTPLSALYVSKLFHEAGLPSGALNVVSGFGPTAGAALCSHMDVDKLAFTGSTETG 717
           KTAEQTPLSA+Y +KLFHEAGLP G LNVVSGFGPTAGAAL SHMDVDKLAFTGST+TG
Sbjct: 231 KTAEQTPLSAVYAAKLFHEAGLPDGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTG 289


>dbj|BAB92019.1| mitochondrial aldehyde dehydrogenase [Sorghum bicolor]
          Length = 547

 Score =  437 bits (1123), Expect = e-120
 Identities = 206/235 (87%), Positives = 223/235 (94%)
 Frame = +1

Query: 13  VDVNYSQLLINGQFVDAVSGKTFPTLDPRTGDVIAQVSEGDAEDINRAVAAARKAFDEGP 192
           V VNY++LLING FVDA SGKTFPTLDPRTG+VIA V+EGDAEDINRAVAAARKAFDEGP
Sbjct: 62  VQVNYTKLLINGNFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVAAARKAFDEGP 121

Query: 193 WPKLTAYERSRIMFRFADLLEKHNDEIAALETWDNGKPYEQSANIEIPMVARLFRYYAGW 372
           WPK+TAYERSRI+ RFADL+EKHNDE+AALETWDNGKPYEQ+A+IE+PMVARL RYYAGW
Sbjct: 122 WPKMTAYERSRILLRFADLIEKHNDELAALETWDNGKPYEQAAHIEVPMVARLMRYYAGW 181

Query: 373 ADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNTVVLKTAE 552
           ADKIHGL VPADGP+HVQ LHEPIGVAGQIIPWNFPLLM+AWKVGPALACGNT+VLKTAE
Sbjct: 182 ADKIHGLVVPADGPHHVQILHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTLVLKTAE 241

Query: 553 QTPLSALYVSKLFHEAGLPSGALNVVSGFGPTAGAALCSHMDVDKLAFTGSTETG 717
           QTPLSALY+SKL HEAGLP G +NVVSGFGPTAGAAL SHMDVDKLAFTGST+TG
Sbjct: 242 QTPLSALYISKLLHEAGLPEGVVNVVSGFGPTAGAALASHMDVDKLAFTGSTDTG 296


>ref|NP_001105891.1| mitochondrial aldehyde dehydrogenase 2 [Zea mays]
           gi|12004294|gb|AAG43988.1|AF215823_1 T cytoplasm male
           sterility restorer factor 2 [Zea mays]
           gi|1421730|gb|AAC49371.1| RF2 [Zea mays]
           gi|195637116|gb|ACG38026.1| aldehyde dehydrogenase [Zea
           mays] gi|223948941|gb|ACN28554.1| unknown [Zea mays]
           gi|413953663|gb|AFW86312.1| restorer of fertility2 [Zea
           mays]
          Length = 549

 Score =  435 bits (1119), Expect = e-120
 Identities = 205/235 (87%), Positives = 222/235 (94%)
 Frame = +1

Query: 13  VDVNYSQLLINGQFVDAVSGKTFPTLDPRTGDVIAQVSEGDAEDINRAVAAARKAFDEGP 192
           V VNY++LLING FVD+ SGKTFPTLDPRTG+VIA V+EGDAEDINRAVAAARKAFDEGP
Sbjct: 64  VHVNYTKLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVAAARKAFDEGP 123

Query: 193 WPKLTAYERSRIMFRFADLLEKHNDEIAALETWDNGKPYEQSANIEIPMVARLFRYYAGW 372
           WPK+TAYERSRI+ RFADL+EKHNDE+AALETWDNGKPYEQ+A IE+PMVARL RYYAGW
Sbjct: 124 WPKMTAYERSRILLRFADLIEKHNDELAALETWDNGKPYEQAAQIEVPMVARLMRYYAGW 183

Query: 373 ADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNTVVLKTAE 552
           ADKIHGL VPADGP+HVQ LHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNT+VLKTAE
Sbjct: 184 ADKIHGLIVPADGPHHVQILHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNTLVLKTAE 243

Query: 553 QTPLSALYVSKLFHEAGLPSGALNVVSGFGPTAGAALCSHMDVDKLAFTGSTETG 717
           QTPLSALY+SKL HEAGLP G +NVVSGFGPTAGAAL SHMDVDK+AFTGST+TG
Sbjct: 244 QTPLSALYISKLLHEAGLPEGVVNVVSGFGPTAGAALASHMDVDKIAFTGSTDTG 298


>gb|AFW86313.1| restorer of fertility2 [Zea mays]
          Length = 459

 Score =  435 bits (1119), Expect = e-120
 Identities = 205/235 (87%), Positives = 222/235 (94%)
 Frame = +1

Query: 13  VDVNYSQLLINGQFVDAVSGKTFPTLDPRTGDVIAQVSEGDAEDINRAVAAARKAFDEGP 192
           V VNY++LLING FVD+ SGKTFPTLDPRTG+VIA V+EGDAEDINRAVAAARKAFDEGP
Sbjct: 64  VHVNYTKLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVAAARKAFDEGP 123

Query: 193 WPKLTAYERSRIMFRFADLLEKHNDEIAALETWDNGKPYEQSANIEIPMVARLFRYYAGW 372
           WPK+TAYERSRI+ RFADL+EKHNDE+AALETWDNGKPYEQ+A IE+PMVARL RYYAGW
Sbjct: 124 WPKMTAYERSRILLRFADLIEKHNDELAALETWDNGKPYEQAAQIEVPMVARLMRYYAGW 183

Query: 373 ADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNTVVLKTAE 552
           ADKIHGL VPADGP+HVQ LHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNT+VLKTAE
Sbjct: 184 ADKIHGLIVPADGPHHVQILHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNTLVLKTAE 243

Query: 553 QTPLSALYVSKLFHEAGLPSGALNVVSGFGPTAGAALCSHMDVDKLAFTGSTETG 717
           QTPLSALY+SKL HEAGLP G +NVVSGFGPTAGAAL SHMDVDK+AFTGST+TG
Sbjct: 244 QTPLSALYISKLLHEAGLPEGVVNVVSGFGPTAGAALASHMDVDKIAFTGSTDTG 298


>gb|AAK58370.1|AF269064_1 T-cytoplasm male sterility restorer factor 2 [Zea mays]
          Length = 549

 Score =  435 bits (1119), Expect = e-120
 Identities = 205/235 (87%), Positives = 222/235 (94%)
 Frame = +1

Query: 13  VDVNYSQLLINGQFVDAVSGKTFPTLDPRTGDVIAQVSEGDAEDINRAVAAARKAFDEGP 192
           V VNY++LLING FVD+ SGKTFPTLDPRTG+VIA V+EGDAEDINRAVAAARKAFDEGP
Sbjct: 64  VHVNYTKLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVAAARKAFDEGP 123

Query: 193 WPKLTAYERSRIMFRFADLLEKHNDEIAALETWDNGKPYEQSANIEIPMVARLFRYYAGW 372
           WPK+TAYERSRI+ RFADL+EKHNDE+AALETWDNGKPYEQ+A IE+PMVARL RYYAGW
Sbjct: 124 WPKMTAYERSRILLRFADLIEKHNDELAALETWDNGKPYEQAAQIEVPMVARLMRYYAGW 183

Query: 373 ADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNTVVLKTAE 552
           ADKIHGL VPADGP+HVQ LHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNT+VLKTAE
Sbjct: 184 ADKIHGLIVPADGPHHVQILHEPIGVAGQIIPWNFPLLMYAWKVGPALACGNTLVLKTAE 243

Query: 553 QTPLSALYVSKLFHEAGLPSGALNVVSGFGPTAGAALCSHMDVDKLAFTGSTETG 717
           QTPLSALY+SKL HEAGLP G +NVVSGFGPTAGAAL SHMDVDK+AFTGST+TG
Sbjct: 244 QTPLSALYISKLLHEAGLPEGVVNVVSGFGPTAGAALASHMDVDKIAFTGSTDTG 298