BLASTX nr result

ID: Panax21_contig00020277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020277
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...   318   6e-85
emb|CBI40718.3| unnamed protein product [Vitis vinifera]              318   6e-85
ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communi...   311   6e-83
ref|XP_002307793.1| cholesterol transport protein [Populus trich...   308   6e-82
ref|XP_002891239.1| predicted protein [Arabidopsis lyrata subsp....   299   3e-79

>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score =  318 bits (815), Expect = 6e-85
 Identities = 163/226 (72%), Positives = 176/226 (77%)
 Frame = +1

Query: 1    SGLMVSLTDICMKPLGQDCATQSVLQYFKMDPANYDSYGGVEHVEYCFQHYSSADTCRSA 180
            SG M+SLTDICMKPLGQDCATQSVLQYFKMD  NYD YGGV+HVEYCFQHY+SADTC SA
Sbjct: 495  SGSMISLTDICMKPLGQDCATQSVLQYFKMDSRNYDDYGGVQHVEYCFQHYTSADTCMSA 554

Query: 181  FKAPLDPSTALGGFSGNNFTEASAFIVTYPVDNAIDKKGNETKKAVAWEKAFIQLVKDEL 360
            FKAPLDPSTALGGFSGNN++EASAFIVTYPV+NAIDK+GNET KAVAWEKAFIQ+VKD+L
Sbjct: 555  FKAPLDPSTALGGFSGNNYSEASAFIVTYPVNNAIDKEGNETGKAVAWEKAFIQIVKDDL 614

Query: 361  LPMVQSKNLTVXXXXXXXXXXXXXXXXXADAITILISYLVMFAYISLTLGDTPTFTSFYX 540
            LPM+QSKNLT+                 ADAITI ISYLVMFAYISLTLGDTP  +SFY 
Sbjct: 615  LPMMQSKNLTLSFSSESSIEEELKRESTADAITISISYLVMFAYISLTLGDTPRLSSFYI 674

Query: 541  XXXXXXXXXXXXXXXXXXXXXXXFYSAIGVKSTLIIMEVIPFLVLA 678
                                   F+SAIGVKSTLIIMEVIPFLVLA
Sbjct: 675  SSKIFLGLAGVMLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLA 720


>emb|CBI40718.3| unnamed protein product [Vitis vinifera]
          Length = 1242

 Score =  318 bits (815), Expect = 6e-85
 Identities = 163/226 (72%), Positives = 176/226 (77%)
 Frame = +1

Query: 1    SGLMVSLTDICMKPLGQDCATQSVLQYFKMDPANYDSYGGVEHVEYCFQHYSSADTCRSA 180
            SG M+SLTDICMKPLGQDCATQSVLQYFKMD  NYD YGGV+HVEYCFQHY+SADTC SA
Sbjct: 428  SGSMISLTDICMKPLGQDCATQSVLQYFKMDSRNYDDYGGVQHVEYCFQHYTSADTCMSA 487

Query: 181  FKAPLDPSTALGGFSGNNFTEASAFIVTYPVDNAIDKKGNETKKAVAWEKAFIQLVKDEL 360
            FKAPLDPSTALGGFSGNN++EASAFIVTYPV+NAIDK+GNET KAVAWEKAFIQ+VKD+L
Sbjct: 488  FKAPLDPSTALGGFSGNNYSEASAFIVTYPVNNAIDKEGNETGKAVAWEKAFIQIVKDDL 547

Query: 361  LPMVQSKNLTVXXXXXXXXXXXXXXXXXADAITILISYLVMFAYISLTLGDTPTFTSFYX 540
            LPM+QSKNLT+                 ADAITI ISYLVMFAYISLTLGDTP  +SFY 
Sbjct: 548  LPMMQSKNLTLSFSSESSIEEELKRESTADAITISISYLVMFAYISLTLGDTPRLSSFYI 607

Query: 541  XXXXXXXXXXXXXXXXXXXXXXXFYSAIGVKSTLIIMEVIPFLVLA 678
                                   F+SAIGVKSTLIIMEVIPFLVLA
Sbjct: 608  SSKIFLGLAGVMLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLA 653


>ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communis]
            gi|223551381|gb|EEF52867.1| hedgehog receptor, putative
            [Ricinus communis]
          Length = 1235

 Score =  311 bits (798), Expect = 6e-83
 Identities = 158/226 (69%), Positives = 176/226 (77%)
 Frame = +1

Query: 1    SGLMVSLTDICMKPLGQDCATQSVLQYFKMDPANYDSYGGVEHVEYCFQHYSSADTCRSA 180
            SG M++L DICMKPL QDCATQSVLQYF+MDP NY++ GGV+H+ YCFQHY+SADTC SA
Sbjct: 429  SGSMIALNDICMKPLDQDCATQSVLQYFQMDPQNYENSGGVDHINYCFQHYTSADTCMSA 488

Query: 181  FKAPLDPSTALGGFSGNNFTEASAFIVTYPVDNAIDKKGNETKKAVAWEKAFIQLVKDEL 360
            FKAPLDPSTALGGFSG+N++EASAFIVTYPV+NAIDK+GNETKKAVAWEKAFIQLVKDEL
Sbjct: 489  FKAPLDPSTALGGFSGSNYSEASAFIVTYPVNNAIDKEGNETKKAVAWEKAFIQLVKDEL 548

Query: 361  LPMVQSKNLTVXXXXXXXXXXXXXXXXXADAITILISYLVMFAYISLTLGDTPTFTSFYX 540
            LPMVQ+KNLT+                 ADAITILISYLVMFAYISLTLGDTP F+ FY 
Sbjct: 549  LPMVQAKNLTLSFSSESSIEEELKRESTADAITILISYLVMFAYISLTLGDTPRFSFFYF 608

Query: 541  XXXXXXXXXXXXXXXXXXXXXXXFYSAIGVKSTLIIMEVIPFLVLA 678
                                   F+SA+GVKSTLIIMEVIPFLVLA
Sbjct: 609  SSKVLLGLSGVMLVVLSVLGSVGFFSAVGVKSTLIIMEVIPFLVLA 654


>ref|XP_002307793.1| cholesterol transport protein [Populus trichocarpa]
            gi|222857242|gb|EEE94789.1| cholesterol transport protein
            [Populus trichocarpa]
          Length = 1274

 Score =  308 bits (789), Expect = 6e-82
 Identities = 159/226 (70%), Positives = 173/226 (76%)
 Frame = +1

Query: 1    SGLMVSLTDICMKPLGQDCATQSVLQYFKMDPANYDSYGGVEHVEYCFQHYSSADTCRSA 180
            SG MVSLTDICMKPL +DCATQSVLQYF+MDP N ++YGGVEHV YC QHY+SADTCRSA
Sbjct: 457  SGSMVSLTDICMKPLDKDCATQSVLQYFQMDPQNLENYGGVEHVNYCLQHYTSADTCRSA 516

Query: 181  FKAPLDPSTALGGFSGNNFTEASAFIVTYPVDNAIDKKGNETKKAVAWEKAFIQLVKDEL 360
            FKAPLDPST+LGGFSGNN++EASAFIVTYPV+N IDK+GNET KAVAWEKAFIQLVK+EL
Sbjct: 517  FKAPLDPSTSLGGFSGNNYSEASAFIVTYPVNNVIDKEGNETDKAVAWEKAFIQLVKNEL 576

Query: 361  LPMVQSKNLTVXXXXXXXXXXXXXXXXXADAITILISYLVMFAYISLTLGDTPTFTSFYX 540
            LPMVQSKNLT+                 AD ITILISYLVMFAYISLTLGD P  +SFY 
Sbjct: 577  LPMVQSKNLTLSFSSESSIEEELKRESTADVITILISYLVMFAYISLTLGDAPHLSSFYI 636

Query: 541  XXXXXXXXXXXXXXXXXXXXXXXFYSAIGVKSTLIIMEVIPFLVLA 678
                                   F+SAIGVKSTLIIMEVIPFLVLA
Sbjct: 637  SSKVLLGLSGVMLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLA 682


>ref|XP_002891239.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297337081|gb|EFH67498.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1261

 Score =  299 bits (766), Expect = 3e-79
 Identities = 149/226 (65%), Positives = 171/226 (75%)
 Frame = +1

Query: 1    SGLMVSLTDICMKPLGQDCATQSVLQYFKMDPANYDSYGGVEHVEYCFQHYSSADTCRSA 180
            SG MVSLTDICMKPLG+DCATQSVLQYFKM P NYD +GGV+HV+YCF+H++S D+C SA
Sbjct: 446  SGSMVSLTDICMKPLGEDCATQSVLQYFKMKPENYDDFGGVDHVKYCFEHFTSTDSCLSA 505

Query: 181  FKAPLDPSTALGGFSGNNFTEASAFIVTYPVDNAIDKKGNETKKAVAWEKAFIQLVKDEL 360
            FK PLDP+TALGGFSGN+F+EASAF+VTYPVDNA+D KGN+T+KAVAWEKAFIQL KDEL
Sbjct: 506  FKGPLDPTTALGGFSGNSFSEASAFLVTYPVDNAVDNKGNKTEKAVAWEKAFIQLAKDEL 565

Query: 361  LPMVQSKNLTVXXXXXXXXXXXXXXXXXADAITILISYLVMFAYISLTLGDTPTFTSFYX 540
            LPMV++KNLT+                 AD ITI ISYLVMFAYISLTLGD+P   SFY 
Sbjct: 566  LPMVKAKNLTLSFSSESSIEEELKRESTADVITIAISYLVMFAYISLTLGDSPRLNSFYI 625

Query: 541  XXXXXXXXXXXXXXXXXXXXXXXFYSAIGVKSTLIIMEVIPFLVLA 678
                                   F+SA+G+KSTLIIMEVIPFLVLA
Sbjct: 626  TSKVLLGLSGVLLVMLSVLGSVGFFSAVGMKSTLIIMEVIPFLVLA 671


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