BLASTX nr result

ID: Panax21_contig00020249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020249
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527397.1| beta-galactosidase, putative [Ricinus commun...   164   7e-39
ref|XP_002327549.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
gb|AFK39962.1| unknown [Lotus japonicus]                              152   3e-35
gb|ABD28499.1| Galactose-binding like [Medicago truncatula]           151   6e-35
ref|XP_003597598.1| Beta-galactosidase [Medicago truncatula] gi|...   151   6e-35

>ref|XP_002527397.1| beta-galactosidase, putative [Ricinus communis]
           gi|223533207|gb|EEF34963.1| beta-galactosidase, putative
           [Ricinus communis]
          Length = 605

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/122 (65%), Positives = 98/122 (80%), Gaps = 3/122 (2%)
 Frame = +2

Query: 2   VENMGRVNYGPYMFDRKGILSSVYLDGIPLHKWKMLSVPFHKIDEVQKINPIFQDALSNF 181
           VENMGRVNYG YMFDRKGILSSVYLDG  L+ W+M+S+P H ++EV KINPI Q   S  
Sbjct: 431 VENMGRVNYGRYMFDRKGILSSVYLDGRILNGWRMISLPLHNLNEVPKINPIIQAVHST- 489

Query: 182 IKISSRKKLKDHFDSFSIEPAFYVGHFTVGK---IQDSFISFTGWGKGIAFVNEFNIGRY 352
             +S+R KL+D+  SFSIEPAFY G+F + K   ++D+FISF+GWGKGIAFVN+FN+GRY
Sbjct: 490 --LSTRTKLEDYPRSFSIEPAFYTGYFFIEKEDQVKDTFISFSGWGKGIAFVNDFNLGRY 547

Query: 353 WP 358
           WP
Sbjct: 548 WP 549


>ref|XP_002327549.1| predicted protein [Populus trichocarpa] gi|222836103|gb|EEE74524.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  155 bits (391), Expect = 4e-36
 Identities = 74/122 (60%), Positives = 93/122 (76%), Gaps = 3/122 (2%)
 Frame = +2

Query: 2   VENMGRVNYGPYMFDRKGILSSVYLDGIPLHKWKMLSVPFHKIDEVQKINPIFQDALSNF 181
           VEN G VNYGPY+FD+KGILSSV+LDGI LH WKM+ +PFH ++EV KIN I + A S F
Sbjct: 471 VENQGHVNYGPYIFDKKGILSSVFLDGIILHGWKMIPIPFHNLNEVPKINLIIEVAHSRF 530

Query: 182 IKISSRKKLKDHFDSFSIEPAFYVGHFTV---GKIQDSFISFTGWGKGIAFVNEFNIGRY 352
           I +S++++LKD        PAF+ GHF +    +I D+FISF+GWGKGIA VN+FNIGRY
Sbjct: 531 ITVSTQRELKD-----KPVPAFFTGHFFIENANQIHDTFISFSGWGKGIAVVNDFNIGRY 585

Query: 353 WP 358
           WP
Sbjct: 586 WP 587


>gb|AFK39962.1| unknown [Lotus japonicus]
          Length = 261

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/125 (60%), Positives = 92/125 (73%), Gaps = 4/125 (3%)
 Frame = +2

Query: 2   VENMGRVNYGPYMFDRKGILSSVYLDGIPLHKWKMLSVPFHKIDEVQKINPIFQDALSNF 181
           VENMGRVNYGP++FDRKGILSSVYLDG  +  WKM  VP H ++EV   NPI Q + S  
Sbjct: 85  VENMGRVNYGPFIFDRKGILSSVYLDGEIVQGWKMFPVPLHNLNEVPSYNPIIQSSYSAL 144

Query: 182 IKIS-SRKKLKDHFDSFSIEPAFYVGHFTVGK---IQDSFISFTGWGKGIAFVNEFNIGR 349
            +IS SRK+L    ++ S EPAFY G F + K   ++D+FISF  WGKG+AFVN+FNIGR
Sbjct: 145 KEISASRKRLIYKSENTSREPAFYSGRFFIDKSSQVKDTFISFNNWGKGVAFVNDFNIGR 204

Query: 350 YWPVR 364
           YWPVR
Sbjct: 205 YWPVR 209


>gb|ABD28499.1| Galactose-binding like [Medicago truncatula]
          Length = 492

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/125 (57%), Positives = 93/125 (74%), Gaps = 4/125 (3%)
 Frame = +2

Query: 2   VENMGRVNYGPYMFDRKGILSSVYLDGIPLHKWKMLSVPFHKIDEVQKINPIFQDALSNF 181
           VENMGRVNYGP++FDRKGILSSVYLDG  +  WKM  +P H ++EV   N I Q + S F
Sbjct: 314 VENMGRVNYGPFIFDRKGILSSVYLDGNRVQGWKMFPIPLHNLNEVPNYNRIMQASYSAF 373

Query: 182 IKIS-SRKKLKDHFDSFSIEPAFYVGHFTVGK---IQDSFISFTGWGKGIAFVNEFNIGR 349
            +IS SRK+L +  ++ S EPAFY GHF + K   ++D+F+SF  WGKG+ FVN+FN+GR
Sbjct: 374 GEISTSRKRLMNKSENTSKEPAFYSGHFLIDKTSQVKDTFLSFRNWGKGVVFVNDFNLGR 433

Query: 350 YWPVR 364
           YWP+R
Sbjct: 434 YWPLR 438


>ref|XP_003597598.1| Beta-galactosidase [Medicago truncatula]
           gi|355486646|gb|AES67849.1| Beta-galactosidase [Medicago
           truncatula]
          Length = 694

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/125 (57%), Positives = 93/125 (74%), Gaps = 4/125 (3%)
 Frame = +2

Query: 2   VENMGRVNYGPYMFDRKGILSSVYLDGIPLHKWKMLSVPFHKIDEVQKINPIFQDALSNF 181
           VENMGRVNYGP++FDRKGILSSVYLDG  +  WKM  +P H ++EV   N I Q + S F
Sbjct: 516 VENMGRVNYGPFIFDRKGILSSVYLDGNRVQGWKMFPIPLHNLNEVPNYNRIMQASYSAF 575

Query: 182 IKIS-SRKKLKDHFDSFSIEPAFYVGHFTVGK---IQDSFISFTGWGKGIAFVNEFNIGR 349
            +IS SRK+L +  ++ S EPAFY GHF + K   ++D+F+SF  WGKG+ FVN+FN+GR
Sbjct: 576 GEISTSRKRLMNKSENTSKEPAFYSGHFLIDKTSQVKDTFLSFRNWGKGVVFVNDFNLGR 635

Query: 350 YWPVR 364
           YWP+R
Sbjct: 636 YWPLR 640


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