BLASTX nr result

ID: Panax21_contig00020242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020242
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26124.3| unnamed protein product [Vitis vinifera]              194   8e-48
emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]   194   8e-48
ref|XP_002314470.1| chromatin remodeling complex subunit [Populu...   194   1e-47
ref|XP_004159854.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   176   2e-42
ref|XP_004134469.1| PREDICTED: uncharacterized protein LOC101206...   176   2e-42

>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score =  194 bits (493), Expect = 8e-48
 Identities = 96/135 (71%), Positives = 113/135 (83%)
 Frame = -2

Query: 406 MAAPSNVELEAAKFLHKLIQESKDEPTKLATKLYVILQHMRSSGKENSMPYQVISRAMET 227
           MA+  NVELEAAKFLHKLIQ+S DEP KLATKLYVILQHM+SSGKE+SMPYQVISRAMET
Sbjct: 1   MASQQNVELEAAKFLHKLIQDSTDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60

Query: 226 VINQHGLDIDALISSRIPLTTGTQVGDSASSQFGGSSMRGAVANEVSSSLASSEQTKVDA 47
           VINQHGLDI+AL SSR+P + GT VGDS++++  GSS    VA +  + LA +E  K+DA
Sbjct: 61  VINQHGLDIEALKSSRLPSSGGTHVGDSSAARLAGSSSAAGVAKDTQAGLAENEMAKIDA 120

Query: 46  YASNRPPVGPSSTGH 2
           +AS+RPPVGPSS GH
Sbjct: 121 FASSRPPVGPSSAGH 135


>emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]
          Length = 771

 Score =  194 bits (493), Expect = 8e-48
 Identities = 96/135 (71%), Positives = 113/135 (83%)
 Frame = -2

Query: 406 MAAPSNVELEAAKFLHKLIQESKDEPTKLATKLYVILQHMRSSGKENSMPYQVISRAMET 227
           MA+  NVELEAAKFLHKLIQ+S DEP KLATKLYVILQHM+SSGKE+SMPYQVISRAMET
Sbjct: 1   MASQQNVELEAAKFLHKLIQDSTDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 60

Query: 226 VINQHGLDIDALISSRIPLTTGTQVGDSASSQFGGSSMRGAVANEVSSSLASSEQTKVDA 47
           VINQHGLDI+AL SSR+P + GT VGDS++++  GSS    VA +  + LA +E  K+DA
Sbjct: 61  VINQHGLDIEALKSSRLPSSGGTHVGDSSAARLAGSSSAAGVAKDTQAGLAENEMAKIDA 120

Query: 46  YASNRPPVGPSSTGH 2
           +AS+RPPVGPSS GH
Sbjct: 121 FASSRPPVGPSSAGH 135


>ref|XP_002314470.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222863510|gb|EEF00641.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 242

 Score =  194 bits (492), Expect = 1e-47
 Identities = 97/130 (74%), Positives = 112/130 (86%)
 Frame = -2

Query: 391 NVELEAAKFLHKLIQESKDEPTKLATKLYVILQHMRSSGKENSMPYQVISRAMETVINQH 212
           NVELEAAKFLHKLIQ+SKDEP KLATKLYVILQHM+SSGKE+SMPYQVISRAMETVINQH
Sbjct: 9   NVELEAAKFLHKLIQDSKDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMETVINQH 68

Query: 211 GLDIDALISSRIPLTTGTQVGDSASSQFGGSSMRGAVANEVSSSLASSEQTKVDAYASNR 32
           GLDI+AL SSR+PLT GTQ+GDS+++Q+GGSS    V  +  + LA +E +KVD  AS+R
Sbjct: 69  GLDIEALRSSRLPLTGGTQMGDSSTAQYGGSSQAVGVGKDSKAGLAENEISKVDPSASSR 128

Query: 31  PPVGPSSTGH 2
           PP GPSS GH
Sbjct: 129 PPAGPSSAGH 138


>ref|XP_004159854.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206586,
           partial [Cucumis sativus]
          Length = 2108

 Score =  176 bits (447), Expect = 2e-42
 Identities = 93/141 (65%), Positives = 110/141 (78%)
 Frame = -2

Query: 424 NDFIKEMAAPSNVELEAAKFLHKLIQESKDEPTKLATKLYVILQHMRSSGKENSMPYQVI 245
           +++I +MAA  NVELEAAKFLHKLIQES+DEP KLATKLYVILQHM+SSGKE+SMPYQVI
Sbjct: 6   DNYINKMAASQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVI 65

Query: 244 SRAMETVINQHGLDIDALISSRIPLTTGTQVGDSASSQFGGSSMRGAVANEVSSSLASSE 65
           SRAMETVINQHGLDI+AL +SR+PLT GTQ+G S+    G  S  G         ++ SE
Sbjct: 66  SRAMETVINQHGLDIEALRASRLPLTGGTQMGSSSVVGAGKDSKMG---------ISGSE 116

Query: 64  QTKVDAYASNRPPVGPSSTGH 2
            +K    AS++PPVGPSST H
Sbjct: 117 MSKSSPLASSKPPVGPSSTDH 137


>ref|XP_004134469.1| PREDICTED: uncharacterized protein LOC101206586, partial [Cucumis
           sativus]
          Length = 2086

 Score =  176 bits (447), Expect = 2e-42
 Identities = 93/141 (65%), Positives = 110/141 (78%)
 Frame = -2

Query: 424 NDFIKEMAAPSNVELEAAKFLHKLIQESKDEPTKLATKLYVILQHMRSSGKENSMPYQVI 245
           +++I +MAA  NVELEAAKFLHKLIQES+DEP KLATKLYVILQHM+SSGKE+SMPYQVI
Sbjct: 6   DNYINKMAASQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVI 65

Query: 244 SRAMETVINQHGLDIDALISSRIPLTTGTQVGDSASSQFGGSSMRGAVANEVSSSLASSE 65
           SRAMETVINQHGLDI+AL +SR+PLT GTQ+G S+    G  S  G         ++ SE
Sbjct: 66  SRAMETVINQHGLDIEALRASRLPLTGGTQMGSSSVVGAGKDSKMG---------ISGSE 116

Query: 64  QTKVDAYASNRPPVGPSSTGH 2
            +K    AS++PPVGPSST H
Sbjct: 117 MSKSSPLASSKPPVGPSSTDH 137


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