BLASTX nr result

ID: Panax21_contig00020234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020234
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269412.2| PREDICTED: uncharacterized protein LOC100254...   153   2e-35
emb|CBI32242.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002520661.1| hypothetical protein RCOM_0555330 [Ricinus c...    97   2e-18
emb|CAN74679.1| hypothetical protein VITISV_006858 [Vitis vinifera]    89   4e-16
ref|XP_002321024.1| predicted protein [Populus trichocarpa] gi|2...    69   8e-10

>ref|XP_002269412.2| PREDICTED: uncharacterized protein LOC100254466 [Vitis vinifera]
          Length = 1730

 Score =  153 bits (386), Expect = 2e-35
 Identities = 97/214 (45%), Positives = 127/214 (59%), Gaps = 22/214 (10%)
 Frame = +2

Query: 5    RSESDKRNLKPSD-FNESVENSPCDEKSK--ARSMSQEKIARCSEKVDKNIIDKNDPAGN 175
            +S  D+  +K SD FNES  + P  E+    A++  QEK    S++V+KN + K D AG 
Sbjct: 1268 KSTCDEDKIKISDSFNESQNHMPSYEEKPRDAKNKFQEKFGSKSDRVEKNPVSKKDSAGK 1327

Query: 176  FLTESGKRESRAKFGSQDGSDIRQVVVSNQDS----KQNLLLDRNGERSSKRFPSDKINR 343
            F TE+ K+++ AKFG  D  D++      QD     KQ+LL + +GER+SKR  S+K +R
Sbjct: 1328 FSTETSKKDNHAKFGGHDSHDVKVEATCGQDEMSTPKQDLLQECDGERTSKRILSEKTDR 1387

Query: 344  VD-VSGKGKSHSLPPSGRGQNETTRWPQPIHGSHKENGV-NMSVDASEGDAALKEPKQV- 514
            V+ VSG+GK   LPPSG          +P  GSHK NG  N+SVDASEGD ALK  KQ+ 
Sbjct: 1388 VEIVSGRGKLLPLPPSGAQNEMLAHGSRPTPGSHKGNGADNLSVDASEGDEALKVSKQIR 1447

Query: 515  -----------SSRHPI-IGHKVRDIDAPSPVRR 580
                       SSRHP   GH++RD DAPSPVRR
Sbjct: 1448 KTDNQNGSLHTSSRHPTPNGHRIRDPDAPSPVRR 1481


>emb|CBI32242.3| unnamed protein product [Vitis vinifera]
          Length = 1398

 Score =  103 bits (257), Expect = 2e-20
 Identities = 68/150 (45%), Positives = 87/150 (58%), Gaps = 18/150 (12%)
 Frame = +2

Query: 185  ESGKRESRAKFGSQDGSDIRQVVVSNQDS---KQNLLLDRNGERSSKRFPSDKINRVD-V 352
            E   R+++ KF  + GS   +      +    KQ+LL + +GER+SKR  S+K +RV+ V
Sbjct: 1000 EEKPRDAKNKFQEKFGSKSDRATCGQDEMSTPKQDLLQECDGERTSKRILSEKTDRVEIV 1059

Query: 353  SGKGKSHSLPPSGRGQNETTRWPQPIHGSHKENGV-NMSVDASEGDAALKEPKQV----- 514
            SG+GK   LPPSG          +P  GSHK NG  N+SVDASEGD ALK  KQ+     
Sbjct: 1060 SGRGKLLPLPPSGAQNEMLAHGSRPTPGSHKGNGADNLSVDASEGDEALKVSKQIRKTDN 1119

Query: 515  -------SSRHPI-IGHKVRDIDAPSPVRR 580
                   SSRHP   GH++RD DAPSPVRR
Sbjct: 1120 QNGSLHTSSRHPTPNGHRIRDPDAPSPVRR 1149


>ref|XP_002520661.1| hypothetical protein RCOM_0555330 [Ricinus communis]
            gi|223540046|gb|EEF41623.1| hypothetical protein
            RCOM_0555330 [Ricinus communis]
          Length = 1670

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 79/209 (37%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
 Frame = +2

Query: 11   ESDKRNLKPSD-FNESVEN---SPCDEKSKARSMSQEKIARCSEKVDKNIIDKNDPAGNF 178
            E D   LK SD  NE   +    P D KSK    ++EK    S++ +   +DK D  G F
Sbjct: 1236 ELDNGKLKVSDSINEQAPSFAVKPTDSKSK----TEEKFGVRSDESENRYVDK-DSIGLF 1290

Query: 179  LTESGKRESRAKFGSQDGSDIRQVVVSNQDSKQNLLLDRNGERSSKRFPSDKINRVDVSG 358
             +ES K+ES++K     GSD +    S    + NLLLD                    SG
Sbjct: 1291 SSESSKKESQSKVREHSGSDSKAHDASIP--RHNLLLDSEA----------------ASG 1332

Query: 359  KGKSHSLPPSGRGQNE-TTRWPQPIHGSHKENGVNMSV-DASEGDAALKEPKQV------ 514
            +GKS SLPPSG  QNE  +  PQP+ GSHK N  N+SV +AS+ D   K  KQ+      
Sbjct: 1333 RGKSPSLPPSGGAQNEPVSHCPQPVSGSHKGNRANISVSNASDSDNPSKTLKQIRKIDQP 1392

Query: 515  ------SSRHPII-GHKVRDIDAPSPVRR 580
                  SS+ P+  G + +D+DAPSPV+R
Sbjct: 1393 NGTHHNSSKDPLSNGRRAKDLDAPSPVKR 1421


>emb|CAN74679.1| hypothetical protein VITISV_006858 [Vitis vinifera]
          Length = 1671

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
 Frame = +2

Query: 5    RSESDKRNLKPSD-FNESVENSPCDEKSK--ARSMSQEKIARCSEKVDKNIIDKNDPAGN 175
            +S  D+  +K SD FNES  + P  E+    A++  QEK    S++V+KN + K D AG 
Sbjct: 1258 KSTCDEDKIKISDSFNESQNHMPSYEEKPRDAKNKFQEKFGSKSDRVEKNPVSKKDSAGK 1317

Query: 176  FLTESGKRESRAKFGSQDGSDIRQVVVSNQDS----KQNLLLDRNGERSSKRFPSDKINR 343
            F TE+ K+++ AKFG  D  D++      QD     KQ+LL + +GER+SKR  S+K +R
Sbjct: 1318 FSTETSKKDNHAKFGGHDSHDVKVEATCGQDEMSTPKQDLLQECDGERTSKRILSEKTDR 1377

Query: 344  VD-VSGKGK 367
            V+ VSG+GK
Sbjct: 1378 VEIVSGRGK 1386


>ref|XP_002321024.1| predicted protein [Populus trichocarpa] gi|222861797|gb|EEE99339.1|
           predicted protein [Populus trichocarpa]
          Length = 708

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
 Frame = +2

Query: 83  SKARSMSQEKIARCSEKVDKNIIDKNDPAGNFLTESGKRESRAKFGSQDGSDIRQVVVSN 262
           +  ++ ++ K+    E+ +   +DK D  G  L+++ KR ++      +GSD+      N
Sbjct: 353 TNCKNKTEVKLGIKPEENEDRYVDKKDYQGQVLSDNSKRVNQLNVRGPNGSDVEVGATRN 412

Query: 263 QDS----KQNLLLDRNGERSSKRFPSDKINRVDVSGKGKSHSLPPSGRGQNETTRW-PQP 427
            D+    KQ++L+D                   VS +G + SLP SG  QNET    P P
Sbjct: 413 HDAVSTPKQSVLIDNE----------------KVSDRGTTQSLPSSGGAQNETLAGSPHP 456

Query: 428 IHGSHKENGVNM-SVDASEGD----AALKEPKQVSSRHPI-------------IGHKVRD 553
              SH+ N  NM  V+AS G+      LK+ ++V+  + I              GH+VRD
Sbjct: 457 NSLSHQGNSANMLVVNASAGENTEMKELKQSRKVNDPNGIDHHHHSSSRNASSNGHRVRD 516

Query: 554 IDAPSPVRR 580
           +D PS V+R
Sbjct: 517 LDGPSSVKR 525


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