BLASTX nr result

ID: Panax21_contig00020227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020227
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872391.1| hypothetical protein ARALYDRAFT_327088 [Arab...    94   2e-17
emb|CAB52557.1| putative protein [Arabidopsis thaliana] gi|72674...    93   2e-17
ref|NP_192575.3| global transcription factor group A2 [Arabidops...    93   2e-17
ref|XP_002313759.1| global transcription factor group [Populus t...    93   2e-17
ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis...    92   3e-17

>ref|XP_002872391.1| hypothetical protein ARALYDRAFT_327088 [Arabidopsis lyrata subsp.
           lyrata] gi|297318228|gb|EFH48650.1| hypothetical protein
           ARALYDRAFT_327088 [Arabidopsis lyrata subsp. lyrata]
          Length = 1051

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/58 (77%), Positives = 51/58 (87%)
 Frame = -1

Query: 277 VKTACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIELSRDTWVRMKIGTYKGDLAKV 104
           VK A KGMRNI++   I+ VPI+E TDVL+VESKAI+LSRDTWVRMKIGTYKGDLAKV
Sbjct: 234 VKEAIKGMRNIYSNQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKV 291


>emb|CAB52557.1| putative protein [Arabidopsis thaliana] gi|7267476|emb|CAB77960.1|
           putative protein [Arabidopsis thaliana]
          Length = 1054

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -1

Query: 277 VKTACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIELSRDTWVRMKIGTYKGDLAKV 104
           VK A KGMRNI+    I+ VPI+E TDVL+VESKAI+LSRDTWVRMKIGTYKGDLAKV
Sbjct: 237 VKEAIKGMRNIYANQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKV 294


>ref|NP_192575.3| global transcription factor group A2 [Arabidopsis thaliana]
           gi|374095445|sp|Q9STN3.2|SPT51_ARATH RecName:
           Full=Putative transcription elongation factor SPT5
           homolog 1 gi|332657229|gb|AEE82629.1| global
           transcription factor group A2 [Arabidopsis thaliana]
          Length = 1041

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -1

Query: 277 VKTACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIELSRDTWVRMKIGTYKGDLAKV 104
           VK A KGMRNI+    I+ VPI+E TDVL+VESKAI+LSRDTWVRMKIGTYKGDLAKV
Sbjct: 237 VKEAIKGMRNIYANQKILLVPIREMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKV 294


>ref|XP_002313759.1| global transcription factor group [Populus trichocarpa]
           gi|222850167|gb|EEE87714.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1042

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/58 (79%), Positives = 51/58 (87%)
 Frame = -1

Query: 277 VKTACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIELSRDTWVRMKIGTYKGDLAKV 104
           V+ ACKG+RNIF G  IM VPI+E TDVL+VESK I+LSRDTWVRMKIGTYKGDLAKV
Sbjct: 242 VREACKGLRNIF-GQKIMLVPIREMTDVLSVESKVIDLSRDTWVRMKIGTYKGDLAKV 298


>ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
           gi|223534550|gb|EEF36249.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 1045

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/58 (79%), Positives = 51/58 (87%)
 Frame = -1

Query: 277 VKTACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIELSRDTWVRMKIGTYKGDLAKV 104
           V+ ACKG+RNI+    IM VPIKE TDVL+VESKAI+LSRDTWVRMKIGTYKGDLAKV
Sbjct: 238 VREACKGLRNIYA-QKIMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKV 294


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