BLASTX nr result

ID: Panax21_contig00020218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020218
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330402.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
ref|XP_003596532.1| Centrin-2 [Medicago truncatula] gi|217071478...   165   6e-39
ref|XP_002528877.1| ccd1, putative [Ricinus communis] gi|2235316...   164   7e-39
ref|XP_002316949.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
gb|AAV92890.1| Avr9/Cf-9 rapidly elicited protein 20, partial [N...   160   1e-37

>ref|XP_002330402.1| predicted protein [Populus trichocarpa]
           gi|224144985|ref|XP_002336191.1| predicted protein
           [Populus trichocarpa] gi|118484952|gb|ABK94341.1|
           unknown [Populus trichocarpa]
           gi|118485777|gb|ABK94737.1| unknown [Populus
           trichocarpa] gi|222832199|gb|EEE70676.1| predicted
           protein [Populus trichocarpa]
           gi|222871787|gb|EEF08918.1| predicted protein [Populus
           trichocarpa]
          Length = 119

 Score =  170 bits (430), Expect = 2e-40
 Identities = 84/101 (83%), Positives = 93/101 (92%), Gaps = 1/101 (0%)
 Frame = -2

Query: 500 MASNNNQ-SQFEDYLPIMAEKLGGDGLMGELCNGFQLLMDGDKGVITFDSLKKNSALLGL 324
           MAS+ NQ S F+D+LP+MA KLGGDGL+GELCNGF LLMDG+KGVITFDSLKKNSALLGL
Sbjct: 1   MASSQNQNSNFQDFLPLMASKLGGDGLIGELCNGFNLLMDGEKGVITFDSLKKNSALLGL 60

Query: 323 QDLTDRDLLSMLKEGDFDGDGALNQMEFCVLMFRLSPDLMD 201
           QDL+D DL SMLKEGDFDGD ALNQMEFCVLMFRLSP+LM+
Sbjct: 61  QDLSDDDLRSMLKEGDFDGDEALNQMEFCVLMFRLSPELME 101


>ref|XP_003596532.1| Centrin-2 [Medicago truncatula] gi|217071478|gb|ACJ84099.1| unknown
           [Medicago truncatula] gi|355485580|gb|AES66783.1|
           Centrin-2 [Medicago truncatula]
           gi|388496930|gb|AFK36531.1| unknown [Medicago
           truncatula]
          Length = 118

 Score =  165 bits (417), Expect = 6e-39
 Identities = 81/100 (81%), Positives = 88/100 (88%)
 Frame = -2

Query: 500 MASNNNQSQFEDYLPIMAEKLGGDGLMGELCNGFQLLMDGDKGVITFDSLKKNSALLGLQ 321
           MAS N Q QF+D LP+MA KLGGDGL+ ELCNGF LLMD  KGVITF+SLKKNSALLGLQ
Sbjct: 1   MASQNTQVQFQDSLPLMANKLGGDGLIDELCNGFNLLMDSTKGVITFESLKKNSALLGLQ 60

Query: 320 DLTDRDLLSMLKEGDFDGDGALNQMEFCVLMFRLSPDLMD 201
           DLTD +L SM+ EGDFDGDGALNQMEFCVLMFRLSP+LMD
Sbjct: 61  DLTDVELQSMIVEGDFDGDGALNQMEFCVLMFRLSPELMD 100


>ref|XP_002528877.1| ccd1, putative [Ricinus communis] gi|223531676|gb|EEF33501.1| ccd1,
           putative [Ricinus communis]
          Length = 120

 Score =  164 bits (416), Expect = 7e-39
 Identities = 79/99 (79%), Positives = 89/99 (89%)
 Frame = -2

Query: 497 ASNNNQSQFEDYLPIMAEKLGGDGLMGELCNGFQLLMDGDKGVITFDSLKKNSALLGLQD 318
           +S +  S F DYLPIMA+KLGGDGL+GELCNGF LL+D +KGVITF+SLKKNSALLGLQD
Sbjct: 3   SSQSPSSDFHDYLPIMADKLGGDGLIGELCNGFNLLVDNEKGVITFESLKKNSALLGLQD 62

Query: 317 LTDRDLLSMLKEGDFDGDGALNQMEFCVLMFRLSPDLMD 201
           L+D DL  MLKEGDFDGDGALNQMEFCVLMFRLSP+LM+
Sbjct: 63  LSDDDLRCMLKEGDFDGDGALNQMEFCVLMFRLSPELME 101


>ref|XP_002316949.1| predicted protein [Populus trichocarpa] gi|222860014|gb|EEE97561.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  163 bits (413), Expect = 2e-38
 Identities = 80/100 (80%), Positives = 91/100 (91%)
 Frame = -2

Query: 500 MASNNNQSQFEDYLPIMAEKLGGDGLMGELCNGFQLLMDGDKGVITFDSLKKNSALLGLQ 321
           MAS++N   FED+LP+MA KLGGDGL+GELCNGF LL+D +KGVITFDSLKKNSALLGLQ
Sbjct: 1   MASSSN---FEDFLPLMANKLGGDGLVGELCNGFNLLVDSEKGVITFDSLKKNSALLGLQ 57

Query: 320 DLTDRDLLSMLKEGDFDGDGALNQMEFCVLMFRLSPDLMD 201
           DL+D DL  ML+EGDFDGDGALNQMEFCVLMFRLSP+LM+
Sbjct: 58  DLSDDDLRCMLREGDFDGDGALNQMEFCVLMFRLSPELME 97


>gb|AAV92890.1| Avr9/Cf-9 rapidly elicited protein 20, partial [Nicotiana tabacum]
          Length = 114

 Score =  160 bits (406), Expect = 1e-37
 Identities = 78/96 (81%), Positives = 87/96 (90%)
 Frame = -2

Query: 488 NNQSQFEDYLPIMAEKLGGDGLMGELCNGFQLLMDGDKGVITFDSLKKNSALLGLQDLTD 309
           + +S F D+LP+MAEKLGGDGL+GELC GFQLLMD DK VITF+SLKKNSALLGLQDL+D
Sbjct: 1   SRKSNFNDFLPLMAEKLGGDGLIGELCKGFQLLMDKDKRVITFESLKKNSALLGLQDLSD 60

Query: 308 RDLLSMLKEGDFDGDGALNQMEFCVLMFRLSPDLMD 201
             L SMLKEGDFDGDGALNQMEFCVLMFRLSP+LM+
Sbjct: 61  DGLKSMLKEGDFDGDGALNQMEFCVLMFRLSPELME 96


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