BLASTX nr result

ID: Panax21_contig00020210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020210
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330402.1| predicted protein [Populus trichocarpa] gi|2...   140   2e-31
ref|XP_003596532.1| Centrin-2 [Medicago truncatula] gi|217071478...   132   2e-29
ref|XP_002528877.1| ccd1, putative [Ricinus communis] gi|2235316...   132   3e-29
ref|XP_002316949.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
gb|AFK46756.1| unknown [Lotus japonicus]                              129   4e-28

>ref|XP_002330402.1| predicted protein [Populus trichocarpa]
           gi|224144985|ref|XP_002336191.1| predicted protein
           [Populus trichocarpa] gi|118484952|gb|ABK94341.1|
           unknown [Populus trichocarpa]
           gi|118485777|gb|ABK94737.1| unknown [Populus
           trichocarpa] gi|222832199|gb|EEE70676.1| predicted
           protein [Populus trichocarpa]
           gi|222871787|gb|EEF08918.1| predicted protein [Populus
           trichocarpa]
          Length = 119

 Score =  140 bits (352), Expect = 2e-31
 Identities = 71/99 (71%), Positives = 80/99 (80%), Gaps = 11/99 (11%)
 Frame = +2

Query: 68  ASHNNQSQFEDYLPIMAEKLGGDGLMGELCNGFQLLMDGDKGVITFDSLKKNSALLGLQD 247
           +S N  S F+D+LP+MA KLGGDGL+GELCNGF LLMDG+KGVITFDSLKKNSALLGLQD
Sbjct: 3   SSQNQNSNFQDFLPLMASKLGGDGLIGELCNGFNLLMDGEKGVITFDSLKKNSALLGLQD 62

Query: 248 LTDRDLLSMLKEGDFD-----------VLMFRLSPDLMD 331
           L+D DL SMLKEGDFD           VLMFRLSP+LM+
Sbjct: 63  LSDDDLRSMLKEGDFDGDEALNQMEFCVLMFRLSPELME 101


>ref|XP_003596532.1| Centrin-2 [Medicago truncatula] gi|217071478|gb|ACJ84099.1| unknown
           [Medicago truncatula] gi|355485580|gb|AES66783.1|
           Centrin-2 [Medicago truncatula]
           gi|388496930|gb|AFK36531.1| unknown [Medicago
           truncatula]
          Length = 118

 Score =  132 bits (333), Expect = 2e-29
 Identities = 70/100 (70%), Positives = 77/100 (77%), Gaps = 11/100 (11%)
 Frame = +2

Query: 65  MASHNNQSQFEDYLPIMAEKLGGDGLMGELCNGFQLLMDGDKGVITFDSLKKNSALLGLQ 244
           MAS N Q QF+D LP+MA KLGGDGL+ ELCNGF LLMD  KGVITF+SLKKNSALLGLQ
Sbjct: 1   MASQNTQVQFQDSLPLMANKLGGDGLIDELCNGFNLLMDSTKGVITFESLKKNSALLGLQ 60

Query: 245 DLTDRDLLSMLKEGDFD-----------VLMFRLSPDLMD 331
           DLTD +L SM+ EGDFD           VLMFRLSP+LMD
Sbjct: 61  DLTDVELQSMIVEGDFDGDGALNQMEFCVLMFRLSPELMD 100


>ref|XP_002528877.1| ccd1, putative [Ricinus communis] gi|223531676|gb|EEF33501.1| ccd1,
           putative [Ricinus communis]
          Length = 120

 Score =  132 bits (332), Expect = 3e-29
 Identities = 68/99 (68%), Positives = 78/99 (78%), Gaps = 11/99 (11%)
 Frame = +2

Query: 68  ASHNNQSQFEDYLPIMAEKLGGDGLMGELCNGFQLLMDGDKGVITFDSLKKNSALLGLQD 247
           +S +  S F DYLPIMA+KLGGDGL+GELCNGF LL+D +KGVITF+SLKKNSALLGLQD
Sbjct: 3   SSQSPSSDFHDYLPIMADKLGGDGLIGELCNGFNLLVDNEKGVITFESLKKNSALLGLQD 62

Query: 248 LTDRDLLSMLKEGDFD-----------VLMFRLSPDLMD 331
           L+D DL  MLKEGDFD           VLMFRLSP+LM+
Sbjct: 63  LSDDDLRCMLKEGDFDGDGALNQMEFCVLMFRLSPELME 101


>ref|XP_002316949.1| predicted protein [Populus trichocarpa] gi|222860014|gb|EEE97561.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/95 (69%), Positives = 76/95 (80%), Gaps = 11/95 (11%)
 Frame = +2

Query: 80  NQSQFEDYLPIMAEKLGGDGLMGELCNGFQLLMDGDKGVITFDSLKKNSALLGLQDLTDR 259
           + S FED+LP+MA KLGGDGL+GELCNGF LL+D +KGVITFDSLKKNSALLGLQDL+D 
Sbjct: 3   SSSNFEDFLPLMANKLGGDGLVGELCNGFNLLVDSEKGVITFDSLKKNSALLGLQDLSDD 62

Query: 260 DLLSMLKEGDFD-----------VLMFRLSPDLMD 331
           DL  ML+EGDFD           VLMFRLSP+LM+
Sbjct: 63  DLRCMLREGDFDGDGALNQMEFCVLMFRLSPELME 97


>gb|AFK46756.1| unknown [Lotus japonicus]
          Length = 122

 Score =  129 bits (323), Expect = 4e-28
 Identities = 64/98 (65%), Positives = 76/98 (77%), Gaps = 11/98 (11%)
 Frame = +2

Query: 71  SHNNQSQFEDYLPIMAEKLGGDGLMGELCNGFQLLMDGDKGVITFDSLKKNSALLGLQDL 250
           SH  Q+QF+D+LP+MA KLGGDGL+ ELCNGF LLMD +KGVITFDSLK+N+  LGLQDL
Sbjct: 7   SHQQQAQFQDHLPLMANKLGGDGLIDELCNGFNLLMDAEKGVITFDSLKRNAHFLGLQDL 66

Query: 251 TDRDLLSMLKEGDFD-----------VLMFRLSPDLMD 331
           +D DL SM+ EGDFD           VLMFRLSP+LM+
Sbjct: 67  SDEDLRSMIVEGDFDRDGTLSQMEFCVLMFRLSPELME 104


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