BLASTX nr result

ID: Panax21_contig00020207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020207
         (1280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|2...   247   5e-63
ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [...   239   8e-61
emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]   226   1e-56
ref|XP_002263352.1| PREDICTED: uncharacterized protein LOC100255...   216   1e-53
emb|CBI17269.3| unnamed protein product [Vitis vinifera]              214   3e-53

>ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|222843524|gb|EEE81071.1|
            predicted protein [Populus trichocarpa]
          Length = 264

 Score =  247 bits (630), Expect = 5e-63
 Identities = 134/263 (50%), Positives = 174/263 (66%), Gaps = 6/263 (2%)
 Frame = -3

Query: 1278 GNWESEENVPYTAYFDNARKGRTGAKM-NPNDPKDNLD--SDGQPPVQVTSFQQEAESKT 1108
            GNWESEENVPYTAYFD ARKGRTG KM NPNDP++N D  SD   P Q   F+ +A  + 
Sbjct: 11   GNWESEENVPYTAYFDKARKGRTGGKMINPNDPQENPDLVSDYAAPDQAPPFRAKAPPEE 70

Query: 1107 QKGPETVRARHERQLSWNEGDVRRPTDPRLRHDAVGRKATVDSPHHRLSGTST---DSPK 937
              G   VR  HE + S  E D+++  +   R++ + R+A+ +    R  G      ++ K
Sbjct: 71   AAGQGAVRQAHEHRTSREESDLKQFANSPARNENLNRRASYEPAPQRYGGRGPSFGEAHK 130

Query: 936  RVSRQSVGSDRSIEQSPLHPNHQARLGNKGSGVSSPSWERKGSSEGRDGLAPSTPGRSRL 757
            R +R S+GS+ S+EQSP+H NH AR+  + SG  SPSWE K S++G  G    TPGRSRL
Sbjct: 131  RPARYSIGSENSMEQSPIH-NH-ARISGRNSGAPSPSWEGKNSNDGSHG----TPGRSRL 184

Query: 756  RSVTRGDETPDHSPAVPKFGDWDESDPASAEGYTQVFNRVREEKQSGTGKVPIMPTETSY 577
            R   +GDE+PD   AVPKFGDWDE++P+SA+GYT +FN+VREEKQ G GK+P MPTE+S 
Sbjct: 185  RP--KGDESPDKGAAVPKFGDWDENNPSSADGYTHIFNKVREEKQIGEGKMPGMPTESSN 242

Query: 576  SNRQKQYGKEDPKKGCLCFPWGR 508
            +  +KQ   +  K  C CFPWGR
Sbjct: 243  AYVRKQTPSDSAK--CCCFPWGR 263


>ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [Vitis vinifera]
          Length = 261

 Score =  239 bits (611), Expect = 8e-61
 Identities = 132/268 (49%), Positives = 176/268 (65%), Gaps = 10/268 (3%)
 Frame = -3

Query: 1278 GNWESEENVPYTAYFDNARKGRTGAKM-NPNDPKDNLD------SDGQPPVQVTSFQQEA 1120
            GNWESEENVPYTAYFD ARKGRTG K+ NPNDP++N D      S+ + P +  + Q+E+
Sbjct: 11   GNWESEENVPYTAYFDKARKGRTGTKIINPNDPQENPDMFSDNASEARSPPRTRAEQEES 70

Query: 1119 ESKTQKGPETVRARHERQLSWNEGDVRRPTDPRLRHDAVGRKATVDSPHHRLSGTSTDSP 940
              +        +  HE +LS  +GD ++ TD   R+D +GR+ + +S H R  G   +S 
Sbjct: 71   IGQ--------QVTHEHRLSKEDGDQKQVTDSPARNDNLGRRPSTESTHQRQGGRGMNSG 122

Query: 939  K--RVSRQSVGSDRSIEQSPLHPNHQARLGNKGSGVSSPSWERKGSSEGRDGLAPSTPGR 766
            +  R  R S GS+ SI++SPLHP+HQAR+  +G+G  SPSWE KGSS      +  TPGR
Sbjct: 123  ETYRKPRTSGGSEHSIDRSPLHPHHQARIAGRGTG--SPSWEGKGSSYDS---SHGTPGR 177

Query: 765  SRLRSVTRGDETPDHSPAVPKFGDWDESDPASAEGYTQVFNRVREEKQSGTG-KVPIMPT 589
            SR++  TRGDE+PD   AVPKFGDWDE++P+SA+GYT +FN+VREE+Q+G   +VP M +
Sbjct: 178  SRMKP-TRGDESPDKGAAVPKFGDWDENNPSSADGYTHIFNKVREERQTGAATRVPGMAS 236

Query: 588  ETSYSNRQKQYGKEDPKKGCLCFPWGRK 505
            E SY   +K        K C CFPWGRK
Sbjct: 237  EPSYQTNRKH--NTSSSKSC-CFPWGRK 261


>emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]
          Length = 599

 Score =  226 bits (575), Expect = 1e-56
 Identities = 123/249 (49%), Positives = 167/249 (67%), Gaps = 10/249 (4%)
 Frame = -3

Query: 1278 GNWESEENVPYTAYFDNARKGRTGAKM-NPNDPKDNLD------SDGQPPVQVTSFQQEA 1120
            GNWESEENVPYTAYFD ARKGRTG K+ NPNDP++N D      S+ + P +  + Q+E+
Sbjct: 18   GNWESEENVPYTAYFDKARKGRTGTKIINPNDPQENPDMFSDNASEARSPPRTRAEQEES 77

Query: 1119 ESKTQKGPETVRARHERQLSWNEGDVRRPTDPRLRHDAVGRKATVDSPHHRLSGTSTDSP 940
              +        +  HE +LS  +GD ++ TD   R+D +GR+ + +S H R  G   +S 
Sbjct: 78   IGQ--------QVTHEHRLSKEDGDQKQVTDSPARNDNLGRRPSTESTHQRQGGRGMNSG 129

Query: 939  K--RVSRQSVGSDRSIEQSPLHPNHQARLGNKGSGVSSPSWERKGSSEGRDGLAPSTPGR 766
            +  R  R S GS+ SI++SPLHP+HQAR+  +G+G  SPSWE KGSS      +  TPGR
Sbjct: 130  ETYRKPRTSGGSEHSIDRSPLHPHHQARIAGRGTG--SPSWEGKGSSYDS---SHGTPGR 184

Query: 765  SRLRSVTRGDETPDHSPAVPKFGDWDESDPASAEGYTQVFNRVREEKQSGTG-KVPIMPT 589
            SR++  TRGDE+PD   AVPKFGDWDE++P+SA+GYT +FN+VREE+Q+G   +VP M +
Sbjct: 185  SRMKP-TRGDESPDKGAAVPKFGDWDENNPSSADGYTHIFNKVREERQTGAATRVPGMAS 243

Query: 588  ETSYSNRQK 562
            E SY   +K
Sbjct: 244  EPSYQTNRK 252


>ref|XP_002263352.1| PREDICTED: uncharacterized protein LOC100255563 [Vitis vinifera]
          Length = 282

 Score =  216 bits (549), Expect = 1e-53
 Identities = 119/248 (47%), Positives = 152/248 (61%), Gaps = 10/248 (4%)
 Frame = -3

Query: 1218 GRTGAKM-NPNDPKDNLDSDGQPPVQVTSFQQEA---------ESKTQKGPETVRARHER 1069
            GR   KM   +D   + D+ GQ    V   Q+           E +  +GP   R ++E 
Sbjct: 38   GREDGKMWRSDDSSLHHDTVGQKAAVVLPHQRHGGARSGSSKPELEETRGPVASRLKYEL 97

Query: 1068 QLSWNEGDVRRPTDPRLRHDAVGRKATVDSPHHRLSGTSTDSPKRVSRQSVGSDRSIEQS 889
             LS  +G++RRPTD   RH+ VG +A  D  + R  G ++   KR  RQS GSD SI+ S
Sbjct: 98   HLSREDGELRRPTDSPSRHEIVGHRAAADLNYQRNGGVNSGD-KRSMRQSTGSDHSIDHS 156

Query: 888  PLHPNHQARLGNKGSGVSSPSWERKGSSEGRDGLAPSTPGRSRLRSVTRGDETPDHSPAV 709
            PLHP +QA +G K SGVSSPSW+++ SSE    L PST  RS+LR  T+G+  PD S AV
Sbjct: 157  PLHPRYQAMVGGKSSGVSSPSWQKRLSSEVSHSLGPSTQ-RSQLRPATQGNRKPDDSTAV 215

Query: 708  PKFGDWDESDPASAEGYTQVFNRVREEKQSGTGKVPIMPTETSYSNRQKQYGKEDPKKGC 529
            PKFGDWDE +P+SAEGYT +FN+V EEKQ   G VP M TE SY +  +QYGK+  K+ C
Sbjct: 216  PKFGDWDERNPSSAEGYTHIFNKVHEEKQRVEGTVPAMVTEPSYPSGPEQYGKDHAKR-C 274

Query: 528  LCFPWGRK 505
             CFPWGRK
Sbjct: 275  CCFPWGRK 282


>emb|CBI17269.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score =  214 bits (546), Expect = 3e-53
 Identities = 109/209 (52%), Positives = 140/209 (66%)
 Frame = -3

Query: 1131 QQEAESKTQKGPETVRARHERQLSWNEGDVRRPTDPRLRHDAVGRKATVDSPHHRLSGTS 952
            + + E +  +GP   R ++E  LS  +G++RRPTD   RH+ VG +A  D  + R  G +
Sbjct: 14   KSKPELEETRGPVASRLKYELHLSREDGELRRPTDSPSRHEIVGHRAAADLNYQRNGGVN 73

Query: 951  TDSPKRVSRQSVGSDRSIEQSPLHPNHQARLGNKGSGVSSPSWERKGSSEGRDGLAPSTP 772
            +   KR  RQS GSD SI+ SPLHP +QA +G K SGVSSPSW+++ SSE    L PST 
Sbjct: 74   SGD-KRSMRQSTGSDHSIDHSPLHPRYQAMVGGKSSGVSSPSWQKRLSSEVSHSLGPSTQ 132

Query: 771  GRSRLRSVTRGDETPDHSPAVPKFGDWDESDPASAEGYTQVFNRVREEKQSGTGKVPIMP 592
             RS+LR  T+G+  PD S AVPKFGDWDE +P+SAEGYT +FN+V EEKQ   G VP M 
Sbjct: 133  -RSQLRPATQGNRKPDDSTAVPKFGDWDERNPSSAEGYTHIFNKVHEEKQRVEGTVPAMV 191

Query: 591  TETSYSNRQKQYGKEDPKKGCLCFPWGRK 505
            TE SY +  +QYGK+  K+ C CFPWGRK
Sbjct: 192  TEPSYPSGPEQYGKDHAKR-CCCFPWGRK 219


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