BLASTX nr result

ID: Panax21_contig00020202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020202
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [...   372   e-100
ref|XP_002512905.1| transcription factor, putative [Ricinus comm...   359   6e-97
gb|ADL36832.1| TCP domain class transcription factor [Malus x do...   358   8e-97
ref|XP_002298640.1| predicted protein [Populus trichocarpa] gi|2...   354   2e-95
ref|XP_002328883.1| predicted protein [Populus trichocarpa] gi|2...   345   1e-92

>ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [Vitis vinifera]
          Length = 296

 Score =  372 bits (954), Expect = e-100
 Identities = 207/276 (75%), Positives = 216/276 (78%), Gaps = 9/276 (3%)
 Frame = -1

Query: 978 NKPAEIKDLQIVLADKEEGKKQQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 799
           NKPAE+KD QIV+ADKEEGKKQ LAPKR+SNKDRHTKVEGRGRRIRMPALCAARIFQLTR
Sbjct: 26  NKPAEVKDFQIVIADKEEGKKQ-LAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 84

Query: 798 ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPXXXXXXXXXXXXXXXXXXXXGLYQKIDE 619
           ELGHKSDGETIQWLLQQAEPSIIAATGTGTIP                    GL+QKIDE
Sbjct: 85  ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSQQGTSISAGLHQKIDE 144

Query: 618 LGGSS-----SRTSWPMVGGNLGRPHMATAGLWPAAAVGGYGFQSSSSGPSTTNLGHESS 454
           LGGSS     SRTSW MVG NLGRPH+AT GLWP   V G+GFQSSS GPSTTNLG+ESS
Sbjct: 145 LGGSSIGSGSSRTSWAMVGANLGRPHVAT-GLWPP--VSGFGFQSSS-GPSTTNLGNESS 200

Query: 453 NYLQKIGFSGFDLPATNLGPMSFASILGASNQQLPGLELGLSQDGHIGVLSSQALSQIYQ 274
           NYLQKI F GFDLPATNLGPMSF SILG SNQQLPGLELGLSQDGHIGVL+SQALSQIYQ
Sbjct: 201 NYLQKIAFPGFDLPATNLGPMSFTSILGGSNQQLPGLELGLSQDGHIGVLNSQALSQIYQ 260

Query: 273 QMGNDRM----XXXXXXXXXXXXQASPKDDSQGSGQ 178
           QMG  R+                Q   KDDSQGSGQ
Sbjct: 261 QMGQARVHQQQQHQHQHQHQHQQQPPAKDDSQGSGQ 296


>ref|XP_002512905.1| transcription factor, putative [Ricinus communis]
           gi|223547916|gb|EEF49408.1| transcription factor,
           putative [Ricinus communis]
          Length = 320

 Score =  359 bits (921), Expect = 6e-97
 Identities = 200/277 (72%), Positives = 214/277 (77%), Gaps = 10/277 (3%)
 Frame = -1

Query: 978 NKPAEIKDLQIVLADKEEGKKQQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 799
           NKPAEIKD QIV+ADKEE KKQ LAPKR+SNKDRHTKVEGRGRRIRMPALCAARIFQLTR
Sbjct: 50  NKPAEIKDFQIVIADKEEQKKQ-LAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 108

Query: 798 ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPXXXXXXXXXXXXXXXXXXXXGLYQKIDE 619
           ELGHKSDGETIQWLLQQAEPSIIAATGTGTIP                    GL+QKID+
Sbjct: 109 ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALVAAGGSVSQQGTSLSAGLHQKIDD 168

Query: 618 LGGSS------SRTSWPMVGGNLGRP-HMATAGLWPAAAVGGYGFQSSS--SGPSTTNLG 466
           LGGSS      SRTSW MVGGNLGRP H+AT GLWP   VGG+GFQSSS  +GP T+NLG
Sbjct: 169 LGGSSSITSSNSRTSWAMVGGNLGRPHHVATTGLWP--PVGGFGFQSSSTTTGPVTSNLG 226

Query: 465 HESSNYLQKIGFSGFDLPATNLGPMSFASIL-GASNQQLPGLELGLSQDGHIGVLSSQAL 289
           +ESS+YLQKIGF GFDLP  N+GPMSF SIL G SNQQ+PGLELGLSQDGHIGVL+SQA 
Sbjct: 227 NESSSYLQKIGFPGFDLPGNNMGPMSFTSILGGTSNQQIPGLELGLSQDGHIGVLNSQAF 286

Query: 288 SQIYQQMGNDRMXXXXXXXXXXXXQASPKDDSQGSGQ 178
           SQIYQQMG  R+                KDDSQGSGQ
Sbjct: 287 SQIYQQMGQARVQHQHQHQHQQN---PAKDDSQGSGQ 320


>gb|ADL36832.1| TCP domain class transcription factor [Malus x domestica]
          Length = 315

 Score =  358 bits (920), Expect = 8e-97
 Identities = 198/274 (72%), Positives = 210/274 (76%), Gaps = 7/274 (2%)
 Frame = -1

Query: 978 NKPAEIKDLQIVLADKEEGKKQQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 799
           NKPAEIKD QIV+ADK+E  K+QLAPKR+SNKDRHTKVEGRGRRIRMPALCAARIFQLTR
Sbjct: 45  NKPAEIKDFQIVIADKDESGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 104

Query: 798 ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPXXXXXXXXXXXXXXXXXXXXGLYQKIDE 619
           ELGHKSDGETIQWLLQQAEPSI+A TGTGTIP                    GL+QKIDE
Sbjct: 105 ELGHKSDGETIQWLLQQAEPSIVATTGTGTIPASALAAAGGSVSQQGTSLSAGLHQKIDE 164

Query: 618 LGGSS-SRTSWPMVGGNLGRPHMA-TAGLWPAAAVGGYGFQSSSSGPS-TTNLGHESSNY 448
           LGGSS  RTSW MVGGNLGRPH+A   GLWP   V  +GFQSSS  PS TTNLG ESSNY
Sbjct: 165 LGGSSGGRTSWAMVGGNLGRPHVAGVGGLWP--PVSSFGFQSSSGPPSATTNLGTESSNY 222

Query: 447 LQKIGFSGFDLPATNLGPMSFASILGASN----QQLPGLELGLSQDGHIGVLSSQALSQI 280
           LQKIGF GFDLP +NLGPMSF SILG  N    QQLPGLELGLSQDGHIGVL+SQALSQI
Sbjct: 223 LQKIGFPGFDLPVSNLGPMSFTSILGGGNQQQQQQLPGLELGLSQDGHIGVLNSQALSQI 282

Query: 279 YQQMGNDRMXXXXXXXXXXXXQASPKDDSQGSGQ 178
           YQQMG+ R+              S KDDSQGSGQ
Sbjct: 283 YQQMGHARVHQQPPQHHHQQQPPS-KDDSQGSGQ 315


>ref|XP_002298640.1| predicted protein [Populus trichocarpa] gi|222845898|gb|EEE83445.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  354 bits (909), Expect = 2e-95
 Identities = 197/276 (71%), Positives = 212/276 (76%), Gaps = 9/276 (3%)
 Frame = -1

Query: 978 NKPAEIKDLQIVLADKEEGKKQQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 799
           NKPAEIKD QIV+ADKEE KKQ LAPKR+SNKDRHTKVEGRGRRIRMPALCAARIFQLTR
Sbjct: 53  NKPAEIKDFQIVVADKEEQKKQ-LAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 111

Query: 798 ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPXXXXXXXXXXXXXXXXXXXXGLYQKIDE 619
           ELGHKSDGETIQWLLQQAEPSIIAATGTGTIP                    GL+QKID+
Sbjct: 112 ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGAISQQGASLSAGLHQKIDD 171

Query: 618 LGG-SSSRTSWPMVGGNLGRP-HMATAGLWPAAAVGGYGFQSS--SSGPSTTNLGHES-- 457
           LGG SSSR SW M+GGNLGRP H+ TAGLWP   VGGYGFQSS  S+GPSTTN+G E+  
Sbjct: 172 LGGSSSSRASWAMLGGNLGRPHHVTTAGLWP--PVGGYGFQSSSNSTGPSTTNIGTEAAA 229

Query: 456 ---SNYLQKIGFSGFDLPATNLGPMSFASILGASNQQLPGLELGLSQDGHIGVLSSQALS 286
              S+YLQK+GF GFDLP  N+GPMSF SILG   QQLPGLELGLSQDGHIGVLS QAL+
Sbjct: 230 AGGSSYLQKLGFPGFDLPGNNMGPMSFTSILGGGTQQLPGLELGLSQDGHIGVLSPQALN 289

Query: 285 QIYQQMGNDRMXXXXXXXXXXXXQASPKDDSQGSGQ 178
           QIYQQMG+ R+                KDDSQGSGQ
Sbjct: 290 QIYQQMGHARVHQQQHQQQN-----PSKDDSQGSGQ 320


>ref|XP_002328883.1| predicted protein [Populus trichocarpa] gi|222839313|gb|EEE77650.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  345 bits (884), Expect = 1e-92
 Identities = 194/274 (70%), Positives = 207/274 (75%), Gaps = 7/274 (2%)
 Frame = -1

Query: 978 NKPAEIKDLQIVLADKEEGKKQQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 799
           NK AEIKD QIV+ADKEE KKQ LAPKR+SNKDRHTKVEGRGRRIRMPALCAARIFQLTR
Sbjct: 58  NKAAEIKDFQIVVADKEEQKKQ-LAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 116

Query: 798 ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPXXXXXXXXXXXXXXXXXXXXGLYQKIDE 619
           ELGHKSDGETIQWLLQQAEPSIIAATGTGTIP                    GL+QKID+
Sbjct: 117 ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGAISQQGASLSAGLHQKIDD 176

Query: 618 LGGSSS-RTSWPMVGGNLGRPHMAT-AGLWPAAAVGGYGFQSSS--SGPSTTNL---GHE 460
           +G SSS RTSW M+GGNLGRPH  T AGLWP   VGGYGFQSSS  +GPSTTN+   G  
Sbjct: 177 IGESSSRRTSWAMLGGNLGRPHQVTSAGLWP--PVGGYGFQSSSNTTGPSTTNIVSEGGG 234

Query: 459 SSNYLQKIGFSGFDLPATNLGPMSFASILGASNQQLPGLELGLSQDGHIGVLSSQALSQI 280
            S+YLQK GFSGFD+P  N+GPMS  SILG  +QQLPGLELGLSQDGHIGVLS QALSQI
Sbjct: 235 GSSYLQKNGFSGFDMPGNNIGPMSLTSILGVGSQQLPGLELGLSQDGHIGVLSPQALSQI 294

Query: 279 YQQMGNDRMXXXXXXXXXXXXQASPKDDSQGSGQ 178
           YQQMG  R+                KDDSQGSGQ
Sbjct: 295 YQQMGQARVQQHQQQN-------PSKDDSQGSGQ 321


Top