BLASTX nr result

ID: Panax21_contig00020188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020188
         (1684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240...   385   e-115
ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|2...   341   e-104
ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|2...   331   e-100
ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap...   340   7e-91
ref|XP_003626181.1| PHD and RING finger domain-containing protei...   332   2e-88

>ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240780 [Vitis vinifera]
          Length = 733

 Score =  385 bits (988), Expect(2) = e-115
 Identities = 220/397 (55%), Positives = 255/397 (64%), Gaps = 8/397 (2%)
 Frame = -2

Query: 1650 KQRKNPVRKGKEKVEDLKKQVVKQVCGICLSEEGKRTVQGTLNCCSHYFCFACIMEWSKV 1471
            ++RK PVRKGKEKVED+K +V KQVCGICLSEEGKR V+GTL+CCSHYFCF CIMEWSKV
Sbjct: 232  EERKPPVRKGKEKVEDVKNEVGKQVCGICLSEEGKRRVRGTLDCCSHYFCFGCIMEWSKV 291

Query: 1470 ESRCPLCKQRFVTISKPARSDSGFDLRTVAIQVPERDQVYQPSEEELRGYLDPYDGVICT 1291
            ESRCPLCKQRF+TISKPAR+++G DLR V IQVPERDQVY PSEEE+RGYLDPY+ VICT
Sbjct: 292  ESRCPLCKQRFMTISKPARANTGIDLRDVMIQVPERDQVYLPSEEEIRGYLDPYENVICT 351

Query: 1290 ECQQGGDDALMLLCDICDSPAHTYCVGLGCEVPEGNWYCEGCRPAAC-GALNSHGINYTP 1114
            EC QGGDD LMLLCD+CDSPAHTYCVGLG EVPEGNWYCEGCRP+     L+ H      
Sbjct: 352  ECHQGGDDGLMLLCDLCDSPAHTYCVGLGREVPEGNWYCEGCRPSQVQDPLSDH------ 405

Query: 1113 DQRASNNLSGLSSPVHNVGELDLNSLYVPDTPLTQETGGFPFSRRFVGDFSAASPTSGSG 934
             +   N LS   SPV N+GE  + SL +  TP TQ   G   S R+  +  AASP S SG
Sbjct: 406  -RTTQNTLSDRPSPVGNIGESLVTSLSLLSTPFTQGI-GINISPRY-RNAEAASPVSASG 462

Query: 933  AFTVFEXXXXXXXXQHLLHSRRNPS--GSQSNGIPSTNSGIRLFGSQIDRGTELAFQQTM 760
            A T+           H + S    S    ++ G  + NSG     SQID+G + A Q T 
Sbjct: 463  ASTL-SGRRWIHRQIHQIRSNNRMSHVAVRNIGNSAPNSGSDFLNSQIDQGLDTASQHTK 521

Query: 759  TPERRASQYTSSQGRLQDVTTTLLPSRDAFSARSSQLIEQG-QNPFSTS----IDGILQA 595
              E   S  T  +  LQD     L + D  S R SQ   Q  Q P +T+      G L  
Sbjct: 522  ALETGTSHSTFLEESLQDNRYPSLQNMDLLSPRLSQSRRQDIQAPTTTATAGPARGTLWD 581

Query: 594  ERSGISMAFNSFNSRLNYEQLHPCSSRSNVDSAGQSS 484
            E  GIS AFNS +     EQLH CSSRS++ S G  S
Sbjct: 582  ELVGISSAFNSISGN---EQLHQCSSRSSIRSDGSVS 615



 Score = 60.1 bits (144), Expect(2) = e-115
 Identities = 30/54 (55%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = -1

Query: 460 TFKDIARSSTHTILAACGQEHRENKVYRVQRPLTFNHIERLSGG-LAVLGSYCS 302
           TFKD+ARSSTHTILAA G EHR ++V+ V  P   +HIER++ G ++++ S CS
Sbjct: 653 TFKDVARSSTHTILAAYGLEHRRSEVHSVPTPPICSHIERIADGQMSLMKSSCS 706


>ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|222857869|gb|EEE95416.1|
            predicted protein [Populus trichocarpa]
          Length = 810

 Score =  341 bits (875), Expect(2) = e-104
 Identities = 194/415 (46%), Positives = 249/415 (60%), Gaps = 11/415 (2%)
 Frame = -2

Query: 1680 KKFKEEKETCKQRKNPVRKGKEKVEDLKKQVVKQVCGICLSEEGKRTVQGTLNCCSHYFC 1501
            K+ +E  + C+Q K   RKGKEKV++ K ++ KQVCGICLSEE KR ++GTL+CCSHYFC
Sbjct: 287  KRIQENGDLCQQTKPVGRKGKEKVKEEKSELGKQVCGICLSEEDKRRLRGTLDCCSHYFC 346

Query: 1500 FACIMEWSKVESRCPLCKQRFVTISKPARSDSGFDLRTVAIQVPERDQVYQPSEEELRGY 1321
            F CIMEWSKVESRCPLCKQRF TI+K  RS  G DLR + I+VP RDQVYQP+EEE+R Y
Sbjct: 347  FTCIMEWSKVESRCPLCKQRFSTIAKNGRSAMGVDLRNMVIEVPMRDQVYQPTEEEIRSY 406

Query: 1320 LDPYDGVICTECQQGGDDALMLLCDICDSPAHTYCVGLGCEVPEGNWYCEGCRPAACGAL 1141
            +DPY+ VIC EC +GGDD LMLLCD+CDS AHTYCVGLG +VPEGNWYC+ CRP A G+ 
Sbjct: 407  IDPYENVICKECHEGGDDGLMLLCDLCDSSAHTYCVGLGRQVPEGNWYCDDCRPVALGST 466

Query: 1140 NSHGINYTPDQ-RASNNLSGLSSPVHNVGE-LDLNSLYVPDTPLTQETGGFPFSRRFVGD 967
            +S   +  PDQ  +SNN+    SP+ N+ E LD N    P   + Q +G     R   GD
Sbjct: 467  SSQAQDPLPDQWNSSNNIFNRPSPILNLDEGLDPNLESAPRLTIPQVSGSLSSPRFLTGD 526

Query: 966  FSAASPTSGSGAFTVFEXXXXXXXXQHLLHSRR-----NPSGSQSNGIPSTNSGIRLFGS 802
               ASP S +GA T+          + LL +R      NP  ++ + I + +       S
Sbjct: 527  IHVASPVSVAGASTLSGRRHLHRHIRTLLSNRNPSANMNPVANRIDVISAASLHSDFLNS 586

Query: 801  QIDRGTELAFQQTMTPERRASQYTSSQGRLQ--DVTTTLLPSRDAFSARSSQLIEQG-QN 631
            QID   E A Q   T E   S+ T ++ RLQ  D  ++   +RD++    +Q   Q  Q+
Sbjct: 587  QIDPVRETALQNLRTQEIGTSEQTPNKERLQANDHPSSSFQNRDSYYLTPNQSRRQTVQD 646

Query: 630  PFSTSIDGILQAERSGISMAFNSFNSRLNYEQLHPCSSRSNVDSAGQ-SSYAFRE 469
            P  T+ D  +        M  NS      +EQ H   SRS+ +  G  SSY  RE
Sbjct: 647  PTITTADRPVNLTLWPDLMGINSIP---GFEQSHQFRSRSSTEPDGTLSSYQVRE 698



 Score = 65.5 bits (158), Expect(2) = e-104
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -1

Query: 469 DQDTFKDIARSSTHTILAACGQEHRENKVYRVQRPLTFNHIER-LSGGLAVLGSYCSS 299
           D DTFKDIARSSTHTILAACG EH+ ++V+ V  P T  H +R ++G  +V+   CSS
Sbjct: 727 DHDTFKDIARSSTHTILAACGLEHKRSEVHTVPLPSTCTHNDRVVAGQTSVMRGCCSS 784


>ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|222871639|gb|EEF08770.1|
            predicted protein [Populus trichocarpa]
          Length = 735

 Score =  331 bits (848), Expect(2) = e-100
 Identities = 194/414 (46%), Positives = 244/414 (58%), Gaps = 11/414 (2%)
 Frame = -2

Query: 1680 KKFKEEKETCKQRKNPVRKGKEKVEDLKKQVVKQVCGICLSEEGKRTVQGTLNCCSHYFC 1501
            K+F+E  + C+Q K   RKGKEKV+++K ++ +QVCGICLSEE KR  +GTL+CCSHYFC
Sbjct: 212  KRFQENGDLCEQTKPLGRKGKEKVDEVKSELGRQVCGICLSEEDKRRFRGTLDCCSHYFC 271

Query: 1500 FACIMEWSKVESRCPLCKQRFVTISKPARSDSGFDLRTVAIQVPERDQVYQPSEEELRGY 1321
            F CIMEWSKVESRCPLCKQRF TI+K  RS  G DLR + IQVP+RDQVYQP+EEE+R Y
Sbjct: 272  FTCIMEWSKVESRCPLCKQRFRTITKNGRSIVGVDLRNMVIQVPKRDQVYQPTEEEIRSY 331

Query: 1320 LDPYDGVICTECQQGGDDALMLLCDICDSPAHTYCVGLGCEVPEGNWYCEGCRPAACGAL 1141
            +DPY+ VIC EC +GGDD LMLLCD+CDS AHTYCVGLG +VPEGNWYC+ CRP A G+ 
Sbjct: 332  IDPYENVICKECHEGGDDGLMLLCDLCDSSAHTYCVGLGRQVPEGNWYCDDCRPVALGSS 391

Query: 1140 NSHGINYTPDQ-RASNNLSGLSSPVHNVGE-LDLNSLYVPDTPLTQETGGFPFSRRFVGD 967
            +S   +  PDQ   S+N+    S + N+ E LD N    P   + Q  G     R   GD
Sbjct: 392  SSQTQDSLPDQWNISSNIFNRPSLMLNLEEGLDPNLESSPRLTVPQAFGSLSSPRFPTGD 451

Query: 966  FSAASPTSGSGAFTVFEXXXXXXXXQHLL-----HSRRNPSGSQSNGIPSTNSGIRLFGS 802
               ASP SG+GA T+          + LL      +  NP  ++ + I + +    L  S
Sbjct: 452  NHVASPVSGAGASTLSGRRHIHRNIRILLSNMNPSTNMNPMANRIDVISAASLRGDLSNS 511

Query: 801  QIDRGTELAFQQTMTPERRASQYTSSQGRLQ--DVTTTLLPSRDAFSARSSQLIEQ-GQN 631
            QID G E A Q   T E    + T  + RLQ  D   +   +RD+F    +QL  Q  Q 
Sbjct: 512  QIDLGRETALQNLRTQEVDTLEQTHHEERLQTNDHQPSSFQNRDSFYLTPNQLTRQIVQG 571

Query: 630  PFSTSIDGILQAERSGISMAFNSFNSRLNYEQLHPCSSRSNVDSAGQ-SSYAFR 472
            P   + D  +        M  NS +     EQLH   SR+     G  SSY  R
Sbjct: 572  PTIPTSDRPVNLTLWPELMGINSMSGS---EQLHEFDSRAMTGHGGTLSSYQVR 622



 Score = 63.5 bits (153), Expect(2) = e-100
 Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
 Frame = -1

Query: 469 DQDTFKDIARSSTHTILAACGQEHRENKVYRVQRPLTFNHIER-LSGGLAVLGSYCSS 299
           D DTFKDI+RSSTHTILAACG EH+ ++V+ V  P T  HI+R ++G  + +   CSS
Sbjct: 652 DHDTFKDISRSSTHTILAACGLEHKRSEVHTVPPPSTCIHIDRVVAGQTSPMKGCCSS 709


>ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
            putative [Ricinus communis] gi|223548440|gb|EEF49931.1|
            splicing factor, arginine/serine-rich 2,rnap interacting
            protein, putative [Ricinus communis]
          Length = 791

 Score =  340 bits (872), Expect = 7e-91
 Identities = 178/360 (49%), Positives = 236/360 (65%), Gaps = 5/360 (1%)
 Frame = -2

Query: 1680 KKFKEEKETCKQRKNPVRKGKEKVEDLKKQVVKQVCGICLSEEGKRTVQGTLNCCSHYFC 1501
            +K +E  + C+Q K+  RKGKEKV+++K ++ KQ+CGICLSEE KR ++GTL+CCSHYFC
Sbjct: 273  RKTQESGDLCQQGKSLARKGKEKVKEVKPELGKQMCGICLSEEDKRRLRGTLDCCSHYFC 332

Query: 1500 FACIMEWSKVESRCPLCKQRFVTISKPARSDSGFDLRTVAIQVPERDQVYQPSEEELRGY 1321
            F CIMEWSKVESRCPLCKQRF TI+K  R+  G + R V IQVP+RDQVYQPSEEE+R +
Sbjct: 333  FTCIMEWSKVESRCPLCKQRFKTITKNGRAAVGVEPRNVVIQVPKRDQVYQPSEEEIRSF 392

Query: 1320 LDPYDGVICTECQQGGDDALMLLCDICDSPAHTYCVGLGCEVPEGNWYCEGCRPAACGAL 1141
            +DPY+ VICTEC +GG+D LMLLCD+CDSPAHT+CVGLG +VPEGNWYCE CRP A G+ 
Sbjct: 393  IDPYENVICTECHEGGEDGLMLLCDLCDSPAHTFCVGLGRQVPEGNWYCEVCRPVALGST 452

Query: 1140 NSHGINYTPDQRASNNLSGLSSP-VHNVGELDLNSLYVPDTPLTQETGGFPFSRRFVGDF 964
            +S  ++  PDQR +NN+    SP  ++V   D  S   P        G     R   GD 
Sbjct: 453  SSQALDPMPDQRTTNNIFSRPSPDTNSVEGFDATSEPSPRLAFAPGFGSLSSPRFPAGDV 512

Query: 963  SAASPTSGSGAFTVFEXXXXXXXXQHLLH-SRRNPSGSQSNGIPSTNSGIRLFGSQIDRG 787
             AASP SG+G  T+ +        Q+L+  SR +   ++++GI + N  I L     D+ 
Sbjct: 513  QAASPVSGAGGSTLSQRRQLHRHIQNLISMSRMHYMANRTDGISAANLHIDLSNPHNDQC 572

Query: 786  TELAFQQTMTPERRASQYTSSQGRLQ--DVTTTLLPSRDAFSARSSQLIEQG-QNPFSTS 616
             E   Q + T E  ASQ T    RL+  D  ++ + + D FS+RSSQ+  Q  Q+P + +
Sbjct: 573  RETIVQNSRTQEIGASQSTFLDERLEANDYPSSSMQNGDLFSSRSSQMRTQALQDPVAAT 632



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -1

Query: 463 DTFKDIARSSTHTILAACGQEHRENKVYRVQRPLTFNHIERL-SGGLAVLGSYCSS 299
           DTFKDI RSSTHTILAACG EH+ ++V+ V  P    H +RL +G  ++L  +CSS
Sbjct: 710 DTFKDILRSSTHTILAACGLEHKRSEVHFVPPPSICAHGDRLIAGQTSILKGFCSS 765


>ref|XP_003626181.1| PHD and RING finger domain-containing protein [Medicago truncatula]
            gi|355501196|gb|AES82399.1| PHD and RING finger
            domain-containing protein [Medicago truncatula]
          Length = 904

 Score =  332 bits (850), Expect = 2e-88
 Identities = 192/385 (49%), Positives = 236/385 (61%), Gaps = 10/385 (2%)
 Frame = -2

Query: 1629 RKGKEKVEDLKKQVVKQVCGICLSEEGKRTVQGTLNCCSHYFCFACIMEWSKVESRCPLC 1450
            RKGKEKVEDLK +V KQVCGICLSEE KR V+G LN C+HYFCFACIMEWSKVESRCPLC
Sbjct: 408  RKGKEKVEDLKSEVGKQVCGICLSEENKRRVRGVLNSCTHYFCFACIMEWSKVESRCPLC 467

Query: 1449 KQRFVTISKPARSDSGFDLRTVAIQVPERDQVYQPSEEELRGYLDPYDGVICTECQQGGD 1270
            KQRF TISKPARS +  +     IQVPERDQVYQP+EEELR Y+DPY+ V+C+EC  GGD
Sbjct: 468  KQRFQTISKPARSTTAEE---AVIQVPERDQVYQPTEEELRSYIDPYESVMCSECHLGGD 524

Query: 1269 DALMLLCDICDSPAHTYCVGLGCEVPEGNWYCEGCRPAACGALNSHGINYTPDQRASNNL 1090
            D LMLLCDICDSPAHTYCVGLG EVPEGNWYC+GCRP A  +LNS     +  + A+ +L
Sbjct: 525  DGLMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPVALASLNSQA-QESDLRAATQSL 583

Query: 1089 SGLSSPVHNVGELDLNSLYVPDTPLTQETGGFPFSRRFVGDFSAASPTSGSGAFTVFEXX 910
                SPVH    +DLN +  P T  +Q  G    SR        ASP SG GA T+ E  
Sbjct: 584  PSRPSPVHIRESIDLNLMSSPHTSFSQGFGHLSSSRFSGRSTEGASPMSGGGAPTLSERR 643

Query: 909  XXXXXXQHL----LHS--RRNPSGSQSNGIPSTNSGIRLFGSQIDRGTELAFQQTMTPER 748
                  Q L    L S  R   +  ++NG+ +T +   L  S+I+R  E + Q   T + 
Sbjct: 644  WIHRQVQQLQIQQLRSIDRMASTTGRTNGVSATGTLSNLNSSEINR--EPSSQHIRTQDV 701

Query: 747  RASQYTSSQGRLQDVTTTLLPSRDAFSARSSQL---IEQGQNPFSTS-IDGILQAERSGI 580
              S +T  + RL +  +  + + D FS R S     + Q    FS   ++  +  E  G 
Sbjct: 702  GTSYHTFFEERLGNNISPFMQNGDPFSIRMSNSRGPVVQDSTMFSNGPVNAAIWPEILGT 761

Query: 579  SMAFNSFNSRLNYEQLHPCSSRSNV 505
            S       +  +Y  +HPCSSRSN+
Sbjct: 762  S-------TLSDYGPIHPCSSRSNI 779



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -1

Query: 460 TFKDIARSSTHTILAACGQEHRENKVYRVQRPLTFNHIERLSGG-LAVLGSYCSS 299
           TFKDIARSSTHTILAACG EH  ++V  V  P    HIE ++GG ++++   CSS
Sbjct: 823 TFKDIARSSTHTILAACGLEHNTSEVCTVPPPSVCPHIELIAGGQMSMIKGCCSS 877


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