BLASTX nr result

ID: Panax21_contig00020182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020182
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517184.1| ubiquitin-activating enzyme E1c, putative [R...    89   3e-16
ref|XP_004134149.1| PREDICTED: NEDD8-activating enzyme E1 cataly...    88   6e-16
gb|AAC27035.1| putative ubiquitin activating enzyme E1 [Arabidop...    88   6e-16
ref|XP_002280928.1| PREDICTED: NEDD8-activating enzyme E1 cataly...    88   6e-16
ref|XP_002315531.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16

>ref|XP_002517184.1| ubiquitin-activating enzyme E1c, putative [Ricinus communis]
           gi|223543819|gb|EEF45347.1| ubiquitin-activating enzyme
           E1c, putative [Ricinus communis]
          Length = 449

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/62 (77%), Positives = 50/62 (80%), Gaps = 4/62 (6%)
 Frame = -3

Query: 262 QDLAFLGFRNLEVID----RYSNLNRQFLFRLEDVGKQKAEVAAKRVMERVSAVNIVPHL 95
           +DLA  GF+NLEVID      SNLNRQFLFRLEDVGK KAEVAAKRVMERVS VNIVPH 
Sbjct: 59  KDLALSGFKNLEVIDMDRIEVSNLNRQFLFRLEDVGKPKAEVAAKRVMERVSGVNIVPHF 118

Query: 94  SR 89
            R
Sbjct: 119 CR 120



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 55/146 (37%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
 Frame = -2

Query: 389 SITRDVHKLLLRSGYLVGPTFDPGT*ERFFKTQEYGKLLVVGAR---------FGLFGFS 237
           S +RD+ KLLLR G LV PTFDPG   R    QEY ++LVVGA            L GF 
Sbjct: 9   SRSRDLDKLLLRPGNLVAPTFDPGVQLRD-DLQEYVRILVVGAGGLGCELLKDLALSGFK 67

Query: 236 EPRSHR*IFQSKSSVSVQXXXXXXXXXXXXXKTS--------HGKSQCCEYCATPIEEKE 81
                       S+++ Q             + +         G +    +C   IE+KE
Sbjct: 68  NLEVIDMDRIEVSNLNRQFLFRLEDVGKPKAEVAAKRVMERVSGVNIVPHFCR--IEDKE 125

Query: 80  LDFYNDFSIIALGLDSVEAHIMVLKV 3
           LDFYNDFSII LGLDS+EA   +  V
Sbjct: 126 LDFYNDFSIIVLGLDSIEARSYINNV 151


>ref|XP_004134149.1| PREDICTED: NEDD8-activating enzyme E1 catalytic subunit-like
           [Cucumis sativus] gi|449515377|ref|XP_004164726.1|
           PREDICTED: NEDD8-activating enzyme E1 catalytic
           subunit-like [Cucumis sativus]
          Length = 449

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/62 (75%), Positives = 50/62 (80%), Gaps = 4/62 (6%)
 Frame = -3

Query: 262 QDLAFLGFRNLEVID----RYSNLNRQFLFRLEDVGKQKAEVAAKRVMERVSAVNIVPHL 95
           +DLA  GFRNLEVID      +NLNRQFLFRLEDVGK KAEVAAKRVMERVS VNI+PH 
Sbjct: 59  KDLALSGFRNLEVIDMDRIEVTNLNRQFLFRLEDVGKPKAEVAAKRVMERVSGVNILPHF 118

Query: 94  SR 89
            R
Sbjct: 119 CR 120



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 50/149 (33%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
 Frame = -2

Query: 389 SITRDVHKLLLRSGYLVGPTFDPGT*ERFFKTQEYGKLLVVGAR---------FGLFGFS 237
           S +RD+ KLLLR G L+G  F+PG+  R    Q+Y K+LV+GA            L GF 
Sbjct: 9   SRSRDLDKLLLRPGNLIGANFEPGSQLRD-DLQQYVKVLVIGAGGLGCELLKDLALSGF- 66

Query: 236 EPRSHR*IFQSKSSVSVQXXXXXXXXXXXXXKTSH-----------GKSQCCEYCATPIE 90
             R+   I   +  V+                 +            G +    +C   IE
Sbjct: 67  --RNLEVIDMDRIEVTNLNRQFLFRLEDVGKPKAEVAAKRVMERVSGVNILPHFCR--IE 122

Query: 89  EKELDFYNDFSIIALGLDSVEAHIMVLKV 3
           +KE++FYNDF IIALGLDS+EA   +  V
Sbjct: 123 DKEIEFYNDFHIIALGLDSIEARSYINSV 151


>gb|AAC27035.1| putative ubiquitin activating enzyme E1 [Arabidopsis thaliana]
          Length = 454

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/62 (75%), Positives = 50/62 (80%), Gaps = 4/62 (6%)
 Frame = -3

Query: 262 QDLAFLGFRNLEVID----RYSNLNRQFLFRLEDVGKQKAEVAAKRVMERVSAVNIVPHL 95
           +DLA  GFRNLEVID      +NLNRQFLFR+EDVGK KAEVAAKRVMERVS V IVPH 
Sbjct: 63  KDLALSGFRNLEVIDMDRIEVTNLNRQFLFRIEDVGKPKAEVAAKRVMERVSGVEIVPHF 122

Query: 94  SR 89
           SR
Sbjct: 123 SR 124


>ref|XP_002280928.1| PREDICTED: NEDD8-activating enzyme E1 catalytic subunit [Vitis
           vinifera] gi|297736997|emb|CBI26198.3| unnamed protein
           product [Vitis vinifera]
          Length = 449

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/62 (75%), Positives = 50/62 (80%), Gaps = 4/62 (6%)
 Frame = -3

Query: 262 QDLAFLGFRNLEVID----RYSNLNRQFLFRLEDVGKQKAEVAAKRVMERVSAVNIVPHL 95
           +DLA  GF+NLEVID      SNLNRQFLFRL+DVGK KAEVAAKRVMERVS VNIVPH 
Sbjct: 59  KDLALSGFKNLEVIDMDRIEVSNLNRQFLFRLQDVGKPKAEVAAKRVMERVSGVNIVPHF 118

Query: 94  SR 89
            R
Sbjct: 119 CR 120



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
 Frame = -2

Query: 389 SITRDVHKLLLRSGYLVGPTFDPGT*ERFFKTQEYGKLLVVGA---------RFGLFGFS 237
           S +RD+ KLLLR G+LVGPTF+PG  E     +++  +LVVGA            L GF 
Sbjct: 9   SRSRDLDKLLLRPGHLVGPTFEPGP-ELRDDLRKFATVLVVGAGGLGCELLKDLALSGFK 67

Query: 236 EPRSHR*IFQSKSSVSVQXXXXXXXXXXXXXKTS--------HGKSQCCEYCATPIEEKE 81
                       S+++ Q             + +         G +    +C   IE+K+
Sbjct: 68  NLEVIDMDRIEVSNLNRQFLFRLQDVGKPKAEVAAKRVMERVSGVNIVPHFCR--IEDKD 125

Query: 80  LDFYNDFSIIALGLDSVEA 24
           ++FYN F+IIALGLDS+EA
Sbjct: 126 IEFYNHFNIIALGLDSIEA 144


>ref|XP_002315531.1| predicted protein [Populus trichocarpa] gi|222864571|gb|EEF01702.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/62 (75%), Positives = 50/62 (80%), Gaps = 4/62 (6%)
 Frame = -3

Query: 262 QDLAFLGFRNLEVID----RYSNLNRQFLFRLEDVGKQKAEVAAKRVMERVSAVNIVPHL 95
           +DLA  GF+NLEVID      +NLNRQFLFRLEDVGK KAEVAAKRVMERVS VNIVPH 
Sbjct: 59  KDLALSGFKNLEVIDMDRIEVTNLNRQFLFRLEDVGKPKAEVAAKRVMERVSGVNIVPHF 118

Query: 94  SR 89
            R
Sbjct: 119 CR 120



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 50/139 (35%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
 Frame = -2

Query: 389 SITRDVHKLLLRSGYLVGPTFDPGT*ERFFKTQEYGKLLVVGAR---------FGLFGFS 237
           S +RD+ KLLLR G LV PTF+ G   R    QEY +LLV+GA            L GF 
Sbjct: 9   SRSRDLDKLLLRPGNLVAPTFESGVQLRD-DLQEYARLLVIGAGGLGCELLKDLALSGFK 67

Query: 236 EPRSHR*IFQSKSSVSVQXXXXXXXXXXXXXKTS--------HGKSQCCEYCATPIEEKE 81
                       ++++ Q             + +         G +    +C   IE+KE
Sbjct: 68  NLEVIDMDRIEVTNLNRQFLFRLEDVGKPKAEVAAKRVMERVSGVNIVPHFCR--IEDKE 125

Query: 80  LDFYNDFSIIALGLDSVEA 24
           +DFY DFSII LGLDSVEA
Sbjct: 126 IDFYKDFSIIVLGLDSVEA 144


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