BLASTX nr result

ID: Panax21_contig00020172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020172
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96617.1| unknown [Populus trichocarpa x Populus deltoides]      101   3e-19
ref|XP_002310893.1| predicted protein [Populus trichocarpa] gi|1...   101   3e-19
gb|ABK78688.1| NADH-ubiquinone oxidoreductase related-like prote...    96   1e-17
ref|NP_201560.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 ...    95   2e-17
ref|XP_002866696.1| hypothetical protein ARALYDRAFT_358798 [Arab...    95   2e-17

>gb|ABK96617.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 159

 Score =  101 bits (252), Expect = 3e-19
 Identities = 43/49 (87%), Positives = 46/49 (93%)
 Frame = -2

Query: 147 YFQAIKWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWDYV 1
           +   +KWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGW+YV
Sbjct: 82  FMSTLKWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWEYV 130


>ref|XP_002310893.1| predicted protein [Populus trichocarpa] gi|118485306|gb|ABK94512.1|
           unknown [Populus trichocarpa]
           gi|222853796|gb|EEE91343.1| predicted protein [Populus
           trichocarpa]
          Length = 159

 Score =  101 bits (252), Expect = 3e-19
 Identities = 43/49 (87%), Positives = 46/49 (93%)
 Frame = -2

Query: 147 YFQAIKWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWDYV 1
           +   +KWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGW+YV
Sbjct: 82  FMSTLKWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWEYV 130


>gb|ABK78688.1| NADH-ubiquinone oxidoreductase related-like protein [Brassica rapa]
          Length = 153

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 41/49 (83%), Positives = 45/49 (91%)
 Frame = -2

Query: 147 YFQAIKWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWDYV 1
           +   +KWENPLMGWTSTGDPYA+VGDSALGFDSE AAK+FAERHGWDYV
Sbjct: 77  FVSTLKWENPLMGWTSTGDPYANVGDSALGFDSELAAKSFAERHGWDYV 125


>ref|NP_201560.1| NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Arabidopsis
           thaliana] gi|75171117|sp|Q9FJW4.1|NDUS4_ARATH RecName:
           Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein
           4, mitochondrial; AltName: Full=Protein FROSTBITE1;
           Flags: Precursor gi|9757880|dbj|BAB08467.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|26452345|dbj|BAC43258.1| unknown protein [Arabidopsis
           thaliana] gi|28372842|gb|AAO39903.1| At5g67590
           [Arabidopsis thaliana] gi|332010981|gb|AED98364.1| NADH
           dehydrogenase (ubiquinone) Fe-S protein 4 [Arabidopsis
           thaliana]
          Length = 154

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = -2

Query: 147 YFQAIKWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWDY 4
           +   +KWENPLMGWTSTGDPYA+VGDSAL FDSEEAAK+FAERHGWDY
Sbjct: 78  FVSTLKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDY 125


>ref|XP_002866696.1| hypothetical protein ARALYDRAFT_358798 [Arabidopsis lyrata subsp.
           lyrata] gi|297312531|gb|EFH42955.1| hypothetical protein
           ARALYDRAFT_358798 [Arabidopsis lyrata subsp. lyrata]
          Length = 154

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = -2

Query: 147 YFQAIKWENPLMGWTSTGDPYAHVGDSALGFDSEEAAKAFAERHGWDY 4
           +   +KWENPLMGWTSTGDPYA+VGDSAL FDSEEAAK+FAERHGWDY
Sbjct: 78  FVSTLKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDY 125


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