BLASTX nr result
ID: Panax21_contig00020121
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00020121 (739 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2... 404 e-110 ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi... 391 e-107 ref|XP_002520500.1| pentatricopeptide repeat-containing protein,... 389 e-106 ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi... 377 e-102 ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab... 369 e-100 >ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa] Length = 650 Score = 404 bits (1038), Expect = e-110 Identities = 197/245 (80%), Positives = 220/245 (89%) Frame = -1 Query: 739 LYRRMNGDGILSDNFTYTYVLKACVVAESLVWLLGKGKEIHAHILRHGYESHVHIMTTLV 560 +YRRMN GI SD FTYTYVLKACV +E V LL KG+EIHAHILRHGY+ +VHIMTTLV Sbjct: 158 MYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLV 217 Query: 559 DMYARFGRVSDASLVFNEMPVKNVVSWSAMIACYAKNGMSFEALELFREMMLETQDLLPN 380 DMYA+FG VS+AS VFN+MPVKNVVSWSAMIACYAKNG +FEALELFRE+MLETQDL PN Sbjct: 218 DMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPN 277 Query: 379 SVTMVSVLQACTALAALEQGKLLHGYVLRKGLDSVLPVINALVTMYARCGNLELGRRVFD 200 SVTMVSVLQAC ALAALEQG+L+HGY+LRKGLDS+LPVI+ALVTMYARCG LELG+RVFD Sbjct: 278 SVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFD 337 Query: 199 QMVRRDVVSWNSMISSYGIHGFGRKAIEVFNEMLYSGTRPSLISFVSVLGACSHEGLVEE 20 QM +RDVVSWNS+ISSYG+HGFG+KAI +F EM Y+G PS ISFVSVLGACSH GLV+E Sbjct: 338 QMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDE 397 Query: 19 GKSLF 5 GK LF Sbjct: 398 GKMLF 402 Score = 115 bits (288), Expect = 9e-24 Identities = 67/233 (28%), Positives = 128/233 (54%), Gaps = 6/233 (2%) Frame = -1 Query: 694 TYTYVLKACVVAESLVWLLGKGKEIHAHILRHGYESHVHIMTTLVDMYARFGRVSDASLV 515 TY ++ +C SL+ + +H H+L +G++ + T L++MY+ F + +A V Sbjct: 72 TYELLILSCTHQNSLL----DAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKV 127 Query: 514 FNEMPVKNVVSWSAMIACYAKNGMSFEALELFREMMLETQDLLPNSVTMVSVLQACTA-- 341 F++ + + ++A+ + G E L ++R M + + + T VL+AC A Sbjct: 128 FDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRM--NSIGIPSDRFTYTYVLKACVASE 185 Query: 340 --LAALEQGKLLHGYVLRKGLDSVLPVINALVTMYARCGNLELGRRVFDQMVRRDVVSWN 167 ++ L +G+ +H ++LR G D + ++ LV MYA+ G + VF+QM ++VVSW+ Sbjct: 186 CFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWS 245 Query: 166 SMISSYGIHGFGRKAIEVFNEMLY--SGTRPSLISFVSVLGACSHEGLVEEGK 14 +MI+ Y +G +A+E+F E++ P+ ++ VSVL AC+ +E+G+ Sbjct: 246 AMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGR 298 >ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Vitis vinifera] Length = 658 Score = 391 bits (1005), Expect = e-107 Identities = 192/246 (78%), Positives = 217/246 (88%) Frame = -1 Query: 739 LYRRMNGDGILSDNFTYTYVLKACVVAESLVWLLGKGKEIHAHILRHGYESHVHIMTTLV 560 LYRRMN G+ SD FTYTYVLKACV +E+ V LL G+EIH HILRHG+E HVHIMTTL+ Sbjct: 166 LYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLL 225 Query: 559 DMYARFGRVSDASLVFNEMPVKNVVSWSAMIACYAKNGMSFEALELFREMMLETQDLLPN 380 DMYARFG V +AS VF++MPVKNVVSWSAMIACY+KNG EALELFR+MMLE QDLLPN Sbjct: 226 DMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPN 285 Query: 379 SVTMVSVLQACTALAALEQGKLLHGYVLRKGLDSVLPVINALVTMYARCGNLELGRRVFD 200 SVTMVSVLQAC ALAALEQGKL+HGY+LR+GLDS+LPV++ALVT+YARCGNLELG RVF+ Sbjct: 286 SVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFE 345 Query: 199 QMVRRDVVSWNSMISSYGIHGFGRKAIEVFNEMLYSGTRPSLISFVSVLGACSHEGLVEE 20 +M +RDVVSWNS+ISSYGIHGFGRKAI++F EM+ G PS ISFVSVLGACSH GLVEE Sbjct: 346 RMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEE 405 Query: 19 GKSLFE 2 GK LFE Sbjct: 406 GKVLFE 411 Score = 119 bits (299), Expect = 5e-25 Identities = 71/233 (30%), Positives = 126/233 (54%), Gaps = 6/233 (2%) Frame = -1 Query: 694 TYTYVLKACVVAESLVWLLGKGKEIHAHILRHGYESHVHIMTTLVDMYARFGRVSDASLV 515 TY ++ +C SL +G ++H H++ G + + T L++MY+ + +A V Sbjct: 80 TYELLILSCTRQNSLP----QGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKV 135 Query: 514 FNEMPVKNVVSWSAMIACYAKNGMSFEALELFREMMLETQDLLPNSVTMVSVLQACTA-- 341 F++ + + W+A+ G E L+L+R M + + T VL+AC A Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRM--NRIGVPSDRFTYTYVLKACVASE 193 Query: 340 --LAALEQGKLLHGYVLRKGLDSVLPVINALVTMYARCGNLELGRRVFDQMVRRDVVSWN 167 ++ L G+ +HG++LR G + + ++ L+ MYAR G + RVFDQM ++VVSW+ Sbjct: 194 AFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWS 253 Query: 166 SMISSYGIHGFGRKAIEVFNEMLYSG--TRPSLISFVSVLGACSHEGLVEEGK 14 +MI+ Y +G +A+E+F +M+ P+ ++ VSVL AC+ +E+GK Sbjct: 254 AMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGK 306 Score = 100 bits (248), Expect = 4e-19 Identities = 63/206 (30%), Positives = 112/206 (54%), Gaps = 6/206 (2%) Frame = -1 Query: 739 LYRRM--NGDGILSDNFTYTYVLKACVVAESLVWLLGKGKEIHAHILRHGYESHVHIMTT 566 L+R+M +L ++ T VL+AC +L +GK +H +ILR G +S + +++ Sbjct: 271 LFRKMMLENQDLLPNSVTMVSVLQACAALAALE----QGKLMHGYILRRGLDSILPVVSA 326 Query: 565 LVDMYARFGRVSDASLVFNEMPVKNVVSWSAMIACYAKNGMSFEALELFREMMLETQDLL 386 LV +YAR G + VF M ++VVSW+++I+ Y +G +A+++F+EM+ Q L Sbjct: 327 LVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMI--DQGLS 384 Query: 385 PNSVTMVSVLQACTALAALEQGKLLHGYVLRKGLDSVLPVIN---ALVTMYARCGNLELG 215 P+ ++ VSVL AC+ +E+GK+L ++R + P + +V + R L+ Sbjct: 385 PSPISFVSVLGACSHAGLVEEGKVLFESMVRG--HKIFPSVEHYACMVDLLGRANRLDEA 442 Query: 214 RRVFDQM-VRRDVVSWNSMISSYGIH 140 ++ D M + W S++ S IH Sbjct: 443 AKIIDDMRIEPGPKVWGSLLGSCRIH 468 Score = 63.5 bits (153), Expect = 4e-08 Identities = 36/143 (25%), Positives = 71/143 (49%) Frame = -1 Query: 472 MIACYAKNGMSFEALELFREMMLETQDLLPNSVTMVSVLQACTALAALEQGKLLHGYVLR 293 +I K G +AL++ +Q+ P T ++ +CT +L QG LH +++ Sbjct: 53 LIQSLCKQGNLNQALQVL------SQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106 Query: 292 KGLDSVLPVINALVTMYARCGNLELGRRVFDQMVRRDVVSWNSMISSYGIHGFGRKAIEV 113 G D + L+ MY+ +++ R+VFD+ +R + WN++ + + G+GR+ +++ Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166 Query: 112 FNEMLYSGTRPSLISFVSVLGAC 44 + M G ++ VL AC Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKAC 189 >ref|XP_002520500.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223540342|gb|EEF41913.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 414 Score = 389 bits (999), Expect = e-106 Identities = 194/246 (78%), Positives = 216/246 (87%) Frame = -1 Query: 739 LYRRMNGDGILSDNFTYTYVLKACVVAESLVWLLGKGKEIHAHILRHGYESHVHIMTTLV 560 LYRRMN G+ SD FTYTYVLKACV + SL+ LL KGKEIHA ILR GYE+HVHIMTTLV Sbjct: 159 LYRRMNSIGMPSDRFTYTYVLKACVASNSLLSLLKKGKEIHAQILRRGYEAHVHIMTTLV 218 Query: 559 DMYARFGRVSDASLVFNEMPVKNVVSWSAMIACYAKNGMSFEALELFREMMLETQDLLPN 380 DMYARFG VS AS VF+EM VKNVVSWSAMIACYAKNG FEALELFREMMLET+D+ PN Sbjct: 219 DMYARFGYVSYASCVFSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETKDMCPN 278 Query: 379 SVTMVSVLQACTALAALEQGKLLHGYVLRKGLDSVLPVINALVTMYARCGNLELGRRVFD 200 SVTMVSVLQAC ALAALEQGKLLHGY+LR+GLDS+LPVI++LVTMYARCG L+L + VFD Sbjct: 279 SVTMVSVLQACAALAALEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLAQHVFD 338 Query: 199 QMVRRDVVSWNSMISSYGIHGFGRKAIEVFNEMLYSGTRPSLISFVSVLGACSHEGLVEE 20 QM +RDVVSWNS+ISSYG+HGFG+KAI++F +M +G PS ISFVSVLGACSH GLVEE Sbjct: 339 QMDKRDVVSWNSLISSYGVHGFGKKAIQIFKDMTRNGVFPSPISFVSVLGACSHAGLVEE 398 Query: 19 GKSLFE 2 GK LFE Sbjct: 399 GKILFE 404 Score = 119 bits (299), Expect = 5e-25 Identities = 73/235 (31%), Positives = 129/235 (54%), Gaps = 6/235 (2%) Frame = -1 Query: 694 TYTYVLKACVVAESLVWLLGKGKEIHAHILRHGYESHVHIMTTLVDMYARFGRVSDASLV 515 TY +L +C S + + +H H+L +G++ + T L++MY+ FG + +A V Sbjct: 73 TYELLLLSCTHQNSFL----DAQFVHQHLLDNGFDQDPFLATKLINMYSSFGSIDNARKV 128 Query: 514 FNEMPVKNVVSWSAMIACYAKNGMSFEALELFREMMLETQDLLPNSVTMVSVLQACTA-- 341 F++ + + ++A+ G E L L+R M + + + T VL+AC A Sbjct: 129 FDKTRSRTLYVYNALFRALTLVGNGEEVLRLYRRM--NSIGMPSDRFTYTYVLKACVASN 186 Query: 340 --LAALEQGKLLHGYVLRKGLDSVLPVINALVTMYARCGNLELGRRVFDQMVRRDVVSWN 167 L+ L++GK +H +LR+G ++ + ++ LV MYAR G + VF +M ++VVSW+ Sbjct: 187 SLLSLLKKGKEIHAQILRRGYEAHVHIMTTLVDMYARFGYVSYASCVFSEMSVKNVVSWS 246 Query: 166 SMISSYGIHGFGRKAIEVFNEMLY--SGTRPSLISFVSVLGACSHEGLVEEGKSL 8 +MI+ Y +G +A+E+F EM+ P+ ++ VSVL AC+ +E+GK L Sbjct: 247 AMIACYAKNGRPFEALELFREMMLETKDMCPNSVTMVSVLQACAALAALEQGKLL 301 >ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucumis sativus] gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucumis sativus] gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucumis sativus] Length = 649 Score = 377 bits (968), Expect = e-102 Identities = 184/246 (74%), Positives = 211/246 (85%) Frame = -1 Query: 739 LYRRMNGDGILSDNFTYTYVLKACVVAESLVWLLGKGKEIHAHILRHGYESHVHIMTTLV 560 LY RMN G+ SD FTYTY+LKACV +E LV L KGKEIHAHILRHGY +HVH+MTTL+ Sbjct: 157 LYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLM 216 Query: 559 DMYARFGRVSDASLVFNEMPVKNVVSWSAMIACYAKNGMSFEALELFREMMLETQDLLPN 380 DMYARFG VS AS VF+EMPVKNVVSWSAMIACYAKNG +EALELFREMML T D +PN Sbjct: 217 DMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPN 276 Query: 379 SVTMVSVLQACTALAALEQGKLLHGYVLRKGLDSVLPVINALVTMYARCGNLELGRRVFD 200 SVTMVSVLQAC A AALEQGKL+H Y+LR+GLDS+LPVI+AL+TMYARCG LE G+ +FD Sbjct: 277 SVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFD 336 Query: 199 QMVRRDVVSWNSMISSYGIHGFGRKAIEVFNEMLYSGTRPSLISFVSVLGACSHEGLVEE 20 +M ++DVV WNS+ISSYG+HG+GRKAI++F EM+ G PS ISF+SVLGACSH GLVEE Sbjct: 337 RMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEE 396 Query: 19 GKSLFE 2 GK LFE Sbjct: 397 GKKLFE 402 Score = 110 bits (276), Expect = 2e-22 Identities = 64/215 (29%), Positives = 120/215 (55%), Gaps = 6/215 (2%) Frame = -1 Query: 640 LGKGKEIHAHILRHGYESHVHIMTTLVDMYARFGRVSDASLVFNEMPVKNVVSWSAMIAC 461 L ++H ++ G++ + T L++M++ V +A VF++ + + W+A+ Sbjct: 85 LSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRA 144 Query: 460 YAKNGMSFEALELFREMMLETQDLLPNSVTMVSVLQACTA----LAALEQGKLLHGYVLR 293 A G + LEL+ M + + + T +L+AC A ++ L++GK +H ++LR Sbjct: 145 LALAGRGNDVLELYPRMNM--MGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILR 202 Query: 292 KGLDSVLPVINALVTMYARCGNLELGRRVFDQMVRRDVVSWNSMISSYGIHGFGRKAIEV 113 G + + V+ L+ MYAR G + VFD+M ++VVSW++MI+ Y +G +A+E+ Sbjct: 203 HGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALEL 262 Query: 112 FNEMLYS--GTRPSLISFVSVLGACSHEGLVEEGK 14 F EM+ + + P+ ++ VSVL AC+ +E+GK Sbjct: 263 FREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGK 297 >ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata] Length = 657 Score = 369 bits (948), Expect = e-100 Identities = 181/246 (73%), Positives = 209/246 (84%) Frame = -1 Query: 739 LYRRMNGDGILSDNFTYTYVLKACVVAESLVWLLGKGKEIHAHILRHGYESHVHIMTTLV 560 LY +MN G+ SD FTYTYVLKACV +E L KGKEIHAH+ R GY SHV+IMTTLV Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLV 224 Query: 559 DMYARFGRVSDASLVFNEMPVKNVVSWSAMIACYAKNGMSFEALELFREMMLETQDLLPN 380 DMYARFG V AS VFN MPV+NVVSWSAMIACYAKNG +FEAL FREMM ET+D PN Sbjct: 225 DMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPN 284 Query: 379 SVTMVSVLQACTALAALEQGKLLHGYVLRKGLDSVLPVINALVTMYARCGNLELGRRVFD 200 SVTMVSVLQAC +LAALEQG+L+HGY+LR+GLDS+LPVI+ALVTMY RCG L++G+RVFD Sbjct: 285 SVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFD 344 Query: 199 QMVRRDVVSWNSMISSYGIHGFGRKAIEVFNEMLYSGTRPSLISFVSVLGACSHEGLVEE 20 +M RDVVSWNS+ISSYG+HG+GRKAI++F EML +G P+ ++FVSVLGACSHEGLVEE Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404 Query: 19 GKSLFE 2 GK LFE Sbjct: 405 GKRLFE 410 Score = 109 bits (272), Expect = 7e-22 Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 5/232 (2%) Frame = -1 Query: 694 TYTYVLKACVVAESLVWLLGKGKEIHAHILRHGYESHVHIMTTLVDMYARFGRVSDASLV 515 TY ++ C SL G +H HIL +G + + T L+ MY+ G V A V Sbjct: 79 TYELLILCCGHRSSL----SDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134 Query: 514 FNEMPVKNVVSWSAMIACYAKNGMSFEALELFREMM---LETQDLLPNSVTMVSVLQACT 344 F++ + + W+A+ G E L L+ +M +E+ V V CT Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194 Query: 343 ALAALEQGKLLHGYVLRKGLDSVLPVINALVTMYARCGNLELGRRVFDQMVRRDVVSWNS 164 A L +GK +H ++ R+G +S + ++ LV MYAR G ++ VF+ M R+VVSW++ Sbjct: 195 A-DHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSA 253 Query: 163 MISSYGIHGFGRKAIEVFNEML--YSGTRPSLISFVSVLGACSHEGLVEEGK 14 MI+ Y +G +A+ F EM+ + P+ ++ VSVL AC+ +E+G+ Sbjct: 254 MIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGR 305 Score = 59.3 bits (142), Expect = 8e-07 Identities = 35/148 (23%), Positives = 71/148 (47%) Frame = -1 Query: 487 VSWSAMIACYAKNGMSFEALELFREMMLETQDLLPNSVTMVSVLQACTALAALEQGKLLH 308 +S + +I K G +AL + +Q+ P+ T ++ C ++L G +H Sbjct: 47 ISNNQLIQSLCKEGKLKQALRVL------SQESSPSQQTYELLILCCGHRSSLSDGLRVH 100 Query: 307 GYVLRKGLDSVLPVINALVTMYARCGNLELGRRVFDQMVRRDVVSWNSMISSYGIHGFGR 128 ++L G D + L+ MY+ G+++ R+VFD+ +R + WN++ + + G G Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160 Query: 127 KAIEVFNEMLYSGTRPSLISFVSVLGAC 44 + + ++ +M G ++ VL AC Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKAC 188