BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020111
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95955.1| retrotransposon protein, putative, Ty3-gypsy sub-...    69   4e-10
gb|ABA99731.1| retrotransposon protein, putative, Ty3-gypsy subc...    69   5e-10
emb|CAE05173.2| OSJNBa0013A04.10 [Oryza sativa Japonica Group]         68   7e-10
gb|AAT44283.1| putative polyprotein [Oryza sativa Japonica Group]      68   7e-10
gb|ABA92141.1| retrotransposon protein, putative, Ty3-gypsy subc...    67   1e-09

>gb|AAX95955.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550301|gb|ABA93098.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1731

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/115 (34%), Positives = 56/115 (48%)
 Frame = +3

Query: 51  LRKDARQWMGTLPSDSISSWTELCDKFHARFGSNRRRGKPTGSLAQVRQFTSESLGQYVK 230
           L   AR W+  LP  +I SW ELCD F A F            L  V Q + ESL  Y++
Sbjct: 386 LADSARSWLHGLPHGTIGSWAELCDHFIANFHGTFECPGTQFDLYNVIQKSGESLRDYIR 445

Query: 231 RFREAVGQVSDLNDLQAVGLFQNGLDLVKSEKLVKKLMFHHPKSLAEAFDKAEGY 395
           RF E   ++SD+ D   +  F  G   ++ E LV K     P+++ + F+KA  Y
Sbjct: 446 RFSEQCNKISDITDDVIIAAFTKG---IRHEDLVGKFGRKPPRTVKQMFEKANEY 497


>gb|ABA99731.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1752

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/124 (33%), Positives = 59/124 (47%)
 Frame = +3

Query: 24  AKCHTFVTTLRKDARQWMGTLPSDSISSWTELCDKFHARFGSNRRRGKPTGSLAQVRQFT 203
           A  +  +  L   AR W+  LP  +I SW EL D F A F     R      L  + Q +
Sbjct: 384 AMANYLLVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTHFDLYNIVQKS 443

Query: 204 SESLGQYVKRFREAVGQVSDLNDLQAVGLFQNGLDLVKSEKLVKKLMFHHPKSLAEAFDK 383
            ESL  Y++RF E   ++SD+ D   +  F  G   ++ E LV K     PK++ + F+K
Sbjct: 444 GESLRDYIRRFSEQRNKISDITDDVIIAAFTKG---IRHEDLVGKFGRKPPKTVTQMFEK 500

Query: 384 AEGY 395
           A  Y
Sbjct: 501 ANEY 504


>emb|CAE05173.2| OSJNBa0013A04.10 [Oryza sativa Japonica Group]
          Length = 1230

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/108 (35%), Positives = 54/108 (50%)
 Frame = +3

Query: 72  WMGTLPSDSISSWTELCDKFHARFGSNRRRGKPTGSLAQVRQFTSESLGQYVKRFREAVG 251
           W+  LP  +I SW ELCD F A F     R      L  + Q + ESL  Y++RF E   
Sbjct: 138 WLHGLPRGTIGSWAELCDHFIANFQGTFERPGTHFDLYNIIQKSGESLRDYIRRFSEQCN 197

Query: 252 QVSDLNDLQAVGLFQNGLDLVKSEKLVKKLMFHHPKSLAEAFDKAEGY 395
           ++SD+ D   +  F  G   ++ E LV K     PK++ + F+KA  Y
Sbjct: 198 KISDITDDVIIAAFTKG---IRHEDLVGKFGRKPPKTVKQMFEKANEY 242


>gb|AAT44283.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1741

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/115 (35%), Positives = 56/115 (48%)
 Frame = +3

Query: 51  LRKDARQWMGTLPSDSISSWTELCDKFHARFGSNRRRGKPTGSLAQVRQFTSESLGQYVK 230
           L   AR W+  LP  +I SW EL D F A F     R      L  V Q + ESL  Y++
Sbjct: 432 LADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQFDLYNVIQKSRESLRDYIR 491

Query: 231 RFREAVGQVSDLNDLQAVGLFQNGLDLVKSEKLVKKLMFHHPKSLAEAFDKAEGY 395
           RF E   ++SD+ D   +  F  G   ++ E LV K     PK++ + F+KA  Y
Sbjct: 492 RFSEQRNKISDITDNVIIAAFTKG---IRHEDLVDKFGRKPPKTVKQMFEKANEY 543


>gb|ABA92141.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1929

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/115 (34%), Positives = 57/115 (49%)
 Frame = +3

Query: 51  LRKDARQWMGTLPSDSISSWTELCDKFHARFGSNRRRGKPTGSLAQVRQFTSESLGQYVK 230
           L   AR W+  LP  +I+SW EL D F A F     R      L  + Q + ESL  Y++
Sbjct: 451 LADSARSWLHGLPCGTIASWAELLDHFIANFQGTFERPGTHFDLYNIVQKSGESLRDYIR 510

Query: 231 RFREAVGQVSDLNDLQAVGLFQNGLDLVKSEKLVKKLMFHHPKSLAEAFDKAEGY 395
           RF E   ++SD+ D   +  F  G   ++ E LV K     PK++ + F+KA  Y
Sbjct: 511 RFFEQRNKISDITDDVIIAAFTKG---IRHEDLVGKFGRKPPKTVKQMFEKANEY 562