BLASTX nr result
ID: Panax21_contig00020104
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00020104 (546 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glyci... 254 5e-66 ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis... 253 1e-65 emb|CBI26799.3| unnamed protein product [Vitis vinifera] 253 1e-65 ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|2... 252 2e-65 ref|XP_003530933.1| PREDICTED: uncharacterized protein C1D4.14-l... 251 5e-65 >ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glycine max] Length = 1829 Score = 254 bits (650), Expect = 5e-66 Identities = 129/181 (71%), Positives = 149/181 (82%) Frame = -3 Query: 544 LTALLVKKDFIDLDSIYAHLLPKADEAFEHYNAFSVKRLDEANKIGKINLAATGKDLMDD 365 LTALLVK+DFIDLDSIYAHLLP+ DEAFEHYN FS KRLDEANKIG+INLAA GKDLMDD Sbjct: 262 LTALLVKQDFIDLDSIYAHLLPRDDEAFEHYNTFSSKRLDEANKIGRINLAAIGKDLMDD 321 Query: 364 EKQGDVTVDLFAAXXXXXXXXXXXXXXXXDMETEAVDERSSELENSQTLGLLSGFLSVDD 185 EKQGDVT+DLFAA DMET+AV+ER++EL++SQTLGLL+GFLSVDD Sbjct: 322 EKQGDVTIDLFAAI---------------DMETDAVEERTTELQSSQTLGLLTGFLSVDD 366 Query: 184 WYHSHILFGRLSPLNPVEHIQICNRLFRLIEKSISSAYKLVRQAQLQNAGLPSGVGVDFV 5 WYH+H+LF RLSPLN VEHIQIC+ LFRLI+KSISSAY ++RQ LQN GL +G D + Sbjct: 367 WYHAHLLFERLSPLNAVEHIQICDSLFRLIKKSISSAYDVIRQTHLQNPGLSTGGSTDVM 426 Query: 4 E 2 + Sbjct: 427 D 427 >ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera] Length = 1849 Score = 253 bits (647), Expect = 1e-65 Identities = 133/181 (73%), Positives = 148/181 (81%) Frame = -3 Query: 544 LTALLVKKDFIDLDSIYAHLLPKADEAFEHYNAFSVKRLDEANKIGKINLAATGKDLMDD 365 LTALLVK++FIDLDSIYAHLLPK +EAFEHYN FS KRLDEANKIGKINLAATGKDLM+D Sbjct: 262 LTALLVKEEFIDLDSIYAHLLPKDEEAFEHYNVFSAKRLDEANKIGKINLAATGKDLMED 321 Query: 364 EKQGDVTVDLFAAXXXXXXXXXXXXXXXXDMETEAVDERSSELENSQTLGLLSGFLSVDD 185 EKQGDVT+DLFAA DMETEAV ERSSELEN+QTLGLL+GFL+VDD Sbjct: 322 EKQGDVTIDLFAA---------------LDMETEAVAERSSELENNQTLGLLTGFLAVDD 366 Query: 184 WYHSHILFGRLSPLNPVEHIQICNRLFRLIEKSISSAYKLVRQAQLQNAGLPSGVGVDFV 5 WYH+HILF RLSPLNPV HI+ICN L RLIEKSIS+AY +V QA L++ GL S G D + Sbjct: 367 WYHAHILFDRLSPLNPVAHIEICNGLLRLIEKSISTAYGIVHQAHLESFGLSSS-GSDLM 425 Query: 4 E 2 E Sbjct: 426 E 426 >emb|CBI26799.3| unnamed protein product [Vitis vinifera] Length = 1767 Score = 253 bits (647), Expect = 1e-65 Identities = 133/181 (73%), Positives = 148/181 (81%) Frame = -3 Query: 544 LTALLVKKDFIDLDSIYAHLLPKADEAFEHYNAFSVKRLDEANKIGKINLAATGKDLMDD 365 LTALLVK++FIDLDSIYAHLLPK +EAFEHYN FS KRLDEANKIGKINLAATGKDLM+D Sbjct: 262 LTALLVKEEFIDLDSIYAHLLPKDEEAFEHYNVFSAKRLDEANKIGKINLAATGKDLMED 321 Query: 364 EKQGDVTVDLFAAXXXXXXXXXXXXXXXXDMETEAVDERSSELENSQTLGLLSGFLSVDD 185 EKQGDVT+DLFAA DMETEAV ERSSELEN+QTLGLL+GFL+VDD Sbjct: 322 EKQGDVTIDLFAA---------------LDMETEAVAERSSELENNQTLGLLTGFLAVDD 366 Query: 184 WYHSHILFGRLSPLNPVEHIQICNRLFRLIEKSISSAYKLVRQAQLQNAGLPSGVGVDFV 5 WYH+HILF RLSPLNPV HI+ICN L RLIEKSIS+AY +V QA L++ GL S G D + Sbjct: 367 WYHAHILFDRLSPLNPVAHIEICNGLLRLIEKSISTAYGIVHQAHLESFGLSSS-GSDLM 425 Query: 4 E 2 E Sbjct: 426 E 426 >ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|222862350|gb|EEE99856.1| predicted protein [Populus trichocarpa] Length = 1836 Score = 252 bits (644), Expect = 2e-65 Identities = 130/178 (73%), Positives = 142/178 (79%) Frame = -3 Query: 544 LTALLVKKDFIDLDSIYAHLLPKADEAFEHYNAFSVKRLDEANKIGKINLAATGKDLMDD 365 LTALLVK++FIDLDSI AHLLPK DEAFEHYN FS KRLDEANKIGKINLAATGKDLMDD Sbjct: 264 LTALLVKEEFIDLDSICAHLLPKDDEAFEHYNTFSSKRLDEANKIGKINLAATGKDLMDD 323 Query: 364 EKQGDVTVDLFAAXXXXXXXXXXXXXXXXDMETEAVDERSSELENSQTLGLLSGFLSVDD 185 EKQGDVTVDLFAA DME EAV ER SELEN+QTLGLL+GFLSVDD Sbjct: 324 EKQGDVTVDLFAAL---------------DMEAEAVAERFSELENNQTLGLLTGFLSVDD 368 Query: 184 WYHSHILFGRLSPLNPVEHIQICNRLFRLIEKSISSAYKLVRQAQLQNAGLPSGVGVD 11 WYH+H+LF RLSPLNPV H QICN LFRLIEK +SSAY ++RQ +Q+ G P G+D Sbjct: 369 WYHAHVLFERLSPLNPVAHTQICNGLFRLIEKLVSSAYNIIRQTHIQSCGSPRIAGID 426 >ref|XP_003530933.1| PREDICTED: uncharacterized protein C1D4.14-like [Glycine max] Length = 1728 Score = 251 bits (641), Expect = 5e-65 Identities = 127/181 (70%), Positives = 148/181 (81%) Frame = -3 Query: 544 LTALLVKKDFIDLDSIYAHLLPKADEAFEHYNAFSVKRLDEANKIGKINLAATGKDLMDD 365 LTALLVK+DFIDLDSIYAHLLP+ DEAFEHYN FS KRLDEANKIG+INLAATGKDLMDD Sbjct: 170 LTALLVKQDFIDLDSIYAHLLPRDDEAFEHYNTFSSKRLDEANKIGRINLAATGKDLMDD 229 Query: 364 EKQGDVTVDLFAAXXXXXXXXXXXXXXXXDMETEAVDERSSELENSQTLGLLSGFLSVDD 185 EKQGDVT+DLFAA DMET+A++ER++EL++SQTLGLL+GFLSVDD Sbjct: 230 EKQGDVTIDLFAA---------------IDMETDAIEERTTELQSSQTLGLLTGFLSVDD 274 Query: 184 WYHSHILFGRLSPLNPVEHIQICNRLFRLIEKSISSAYKLVRQAQLQNAGLPSGVGVDFV 5 WYH+H+LF LSPLN VEHIQIC+ LFRLI+KSISSAY ++RQ LQN G +G D + Sbjct: 275 WYHAHLLFECLSPLNAVEHIQICDSLFRLIKKSISSAYDVIRQTHLQNPGSSTGGSTDVM 334 Query: 4 E 2 + Sbjct: 335 D 335