BLASTX nr result

ID: Panax21_contig00020104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020104
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glyci...   254   5e-66
ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis...   253   1e-65
emb|CBI26799.3| unnamed protein product [Vitis vinifera]              253   1e-65
ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|2...   252   2e-65
ref|XP_003530933.1| PREDICTED: uncharacterized protein C1D4.14-l...   251   5e-65

>ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glycine max]
          Length = 1829

 Score =  254 bits (650), Expect = 5e-66
 Identities = 129/181 (71%), Positives = 149/181 (82%)
 Frame = -3

Query: 544 LTALLVKKDFIDLDSIYAHLLPKADEAFEHYNAFSVKRLDEANKIGKINLAATGKDLMDD 365
           LTALLVK+DFIDLDSIYAHLLP+ DEAFEHYN FS KRLDEANKIG+INLAA GKDLMDD
Sbjct: 262 LTALLVKQDFIDLDSIYAHLLPRDDEAFEHYNTFSSKRLDEANKIGRINLAAIGKDLMDD 321

Query: 364 EKQGDVTVDLFAAXXXXXXXXXXXXXXXXDMETEAVDERSSELENSQTLGLLSGFLSVDD 185
           EKQGDVT+DLFAA                DMET+AV+ER++EL++SQTLGLL+GFLSVDD
Sbjct: 322 EKQGDVTIDLFAAI---------------DMETDAVEERTTELQSSQTLGLLTGFLSVDD 366

Query: 184 WYHSHILFGRLSPLNPVEHIQICNRLFRLIEKSISSAYKLVRQAQLQNAGLPSGVGVDFV 5
           WYH+H+LF RLSPLN VEHIQIC+ LFRLI+KSISSAY ++RQ  LQN GL +G   D +
Sbjct: 367 WYHAHLLFERLSPLNAVEHIQICDSLFRLIKKSISSAYDVIRQTHLQNPGLSTGGSTDVM 426

Query: 4   E 2
           +
Sbjct: 427 D 427


>ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera]
          Length = 1849

 Score =  253 bits (647), Expect = 1e-65
 Identities = 133/181 (73%), Positives = 148/181 (81%)
 Frame = -3

Query: 544 LTALLVKKDFIDLDSIYAHLLPKADEAFEHYNAFSVKRLDEANKIGKINLAATGKDLMDD 365
           LTALLVK++FIDLDSIYAHLLPK +EAFEHYN FS KRLDEANKIGKINLAATGKDLM+D
Sbjct: 262 LTALLVKEEFIDLDSIYAHLLPKDEEAFEHYNVFSAKRLDEANKIGKINLAATGKDLMED 321

Query: 364 EKQGDVTVDLFAAXXXXXXXXXXXXXXXXDMETEAVDERSSELENSQTLGLLSGFLSVDD 185
           EKQGDVT+DLFAA                DMETEAV ERSSELEN+QTLGLL+GFL+VDD
Sbjct: 322 EKQGDVTIDLFAA---------------LDMETEAVAERSSELENNQTLGLLTGFLAVDD 366

Query: 184 WYHSHILFGRLSPLNPVEHIQICNRLFRLIEKSISSAYKLVRQAQLQNAGLPSGVGVDFV 5
           WYH+HILF RLSPLNPV HI+ICN L RLIEKSIS+AY +V QA L++ GL S  G D +
Sbjct: 367 WYHAHILFDRLSPLNPVAHIEICNGLLRLIEKSISTAYGIVHQAHLESFGLSSS-GSDLM 425

Query: 4   E 2
           E
Sbjct: 426 E 426


>emb|CBI26799.3| unnamed protein product [Vitis vinifera]
          Length = 1767

 Score =  253 bits (647), Expect = 1e-65
 Identities = 133/181 (73%), Positives = 148/181 (81%)
 Frame = -3

Query: 544 LTALLVKKDFIDLDSIYAHLLPKADEAFEHYNAFSVKRLDEANKIGKINLAATGKDLMDD 365
           LTALLVK++FIDLDSIYAHLLPK +EAFEHYN FS KRLDEANKIGKINLAATGKDLM+D
Sbjct: 262 LTALLVKEEFIDLDSIYAHLLPKDEEAFEHYNVFSAKRLDEANKIGKINLAATGKDLMED 321

Query: 364 EKQGDVTVDLFAAXXXXXXXXXXXXXXXXDMETEAVDERSSELENSQTLGLLSGFLSVDD 185
           EKQGDVT+DLFAA                DMETEAV ERSSELEN+QTLGLL+GFL+VDD
Sbjct: 322 EKQGDVTIDLFAA---------------LDMETEAVAERSSELENNQTLGLLTGFLAVDD 366

Query: 184 WYHSHILFGRLSPLNPVEHIQICNRLFRLIEKSISSAYKLVRQAQLQNAGLPSGVGVDFV 5
           WYH+HILF RLSPLNPV HI+ICN L RLIEKSIS+AY +V QA L++ GL S  G D +
Sbjct: 367 WYHAHILFDRLSPLNPVAHIEICNGLLRLIEKSISTAYGIVHQAHLESFGLSSS-GSDLM 425

Query: 4   E 2
           E
Sbjct: 426 E 426


>ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|222862350|gb|EEE99856.1|
           predicted protein [Populus trichocarpa]
          Length = 1836

 Score =  252 bits (644), Expect = 2e-65
 Identities = 130/178 (73%), Positives = 142/178 (79%)
 Frame = -3

Query: 544 LTALLVKKDFIDLDSIYAHLLPKADEAFEHYNAFSVKRLDEANKIGKINLAATGKDLMDD 365
           LTALLVK++FIDLDSI AHLLPK DEAFEHYN FS KRLDEANKIGKINLAATGKDLMDD
Sbjct: 264 LTALLVKEEFIDLDSICAHLLPKDDEAFEHYNTFSSKRLDEANKIGKINLAATGKDLMDD 323

Query: 364 EKQGDVTVDLFAAXXXXXXXXXXXXXXXXDMETEAVDERSSELENSQTLGLLSGFLSVDD 185
           EKQGDVTVDLFAA                DME EAV ER SELEN+QTLGLL+GFLSVDD
Sbjct: 324 EKQGDVTVDLFAAL---------------DMEAEAVAERFSELENNQTLGLLTGFLSVDD 368

Query: 184 WYHSHILFGRLSPLNPVEHIQICNRLFRLIEKSISSAYKLVRQAQLQNAGLPSGVGVD 11
           WYH+H+LF RLSPLNPV H QICN LFRLIEK +SSAY ++RQ  +Q+ G P   G+D
Sbjct: 369 WYHAHVLFERLSPLNPVAHTQICNGLFRLIEKLVSSAYNIIRQTHIQSCGSPRIAGID 426


>ref|XP_003530933.1| PREDICTED: uncharacterized protein C1D4.14-like [Glycine max]
          Length = 1728

 Score =  251 bits (641), Expect = 5e-65
 Identities = 127/181 (70%), Positives = 148/181 (81%)
 Frame = -3

Query: 544 LTALLVKKDFIDLDSIYAHLLPKADEAFEHYNAFSVKRLDEANKIGKINLAATGKDLMDD 365
           LTALLVK+DFIDLDSIYAHLLP+ DEAFEHYN FS KRLDEANKIG+INLAATGKDLMDD
Sbjct: 170 LTALLVKQDFIDLDSIYAHLLPRDDEAFEHYNTFSSKRLDEANKIGRINLAATGKDLMDD 229

Query: 364 EKQGDVTVDLFAAXXXXXXXXXXXXXXXXDMETEAVDERSSELENSQTLGLLSGFLSVDD 185
           EKQGDVT+DLFAA                DMET+A++ER++EL++SQTLGLL+GFLSVDD
Sbjct: 230 EKQGDVTIDLFAA---------------IDMETDAIEERTTELQSSQTLGLLTGFLSVDD 274

Query: 184 WYHSHILFGRLSPLNPVEHIQICNRLFRLIEKSISSAYKLVRQAQLQNAGLPSGVGVDFV 5
           WYH+H+LF  LSPLN VEHIQIC+ LFRLI+KSISSAY ++RQ  LQN G  +G   D +
Sbjct: 275 WYHAHLLFECLSPLNAVEHIQICDSLFRLIKKSISSAYDVIRQTHLQNPGSSTGGSTDVM 334

Query: 4   E 2
           +
Sbjct: 335 D 335


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