BLASTX nr result

ID: Panax21_contig00020089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020089
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   426   e-117
ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [...   401   e-109
ref|XP_004163452.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   384   e-104
ref|XP_004152744.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   384   e-104
ref|XP_003544252.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   362   7e-98

>ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Vitis vinifera]
          Length = 3750

 Score =  426 bits (1096), Expect = e-117
 Identities = 225/308 (73%), Positives = 238/308 (77%)
 Frame = -1

Query: 925  TMVFKGFTQHHSAPLACAFCSSLRDHLKKALTAFGTVAGSFLLDPRVTPDSGIXXXXXXX 746
            TMVFKGFTQHHSAPLA AFCSSLRDHLKKALT F   +GSFLLDPR+TPDSGI       
Sbjct: 880  TMVFKGFTQHHSAPLARAFCSSLRDHLKKALTGFSVASGSFLLDPRLTPDSGIFPSLFLV 939

Query: 745  XXXXXLAASKDNRWVTALLTEFGNDNKDVLEDIGRVQREVLWQIAFLEDAKLEIEDDVXX 566
                 LAASKDNRWVTALLTEFGND+KDVLEDIGRVQREVLWQIA LEDAK+E EDD   
Sbjct: 940  EFLLFLAASKDNRWVTALLTEFGNDSKDVLEDIGRVQREVLWQIALLEDAKIETEDDGAS 999

Query: 565  XXXXXXXXXXXXXXXXXXRFNSFRQFLDPLLRRRMSGWSFESQFFDLINLYRDLTRASSF 386
                              RFNSFRQFLDPLLRRRMSGWS ESQFFDL+NLYRDL RA+  
Sbjct: 1000 SFAESQQSEPNANDSEEQRFNSFRQFLDPLLRRRMSGWSVESQFFDLLNLYRDLGRATGL 1059

Query: 385  QQRQGIDGPSNLPVGATXXXXXXXXXXSVGASGKKEDDRQRSYYSSCCDMVKSLSFHITH 206
             QR   DG SNL +GA+          S G   KKED++QRSYYSSCCDMV+SLSFHITH
Sbjct: 1060 -QRLTADGSSNLRLGASHQLHHSASSDSTGVISKKEDEKQRSYYSSCCDMVRSLSFHITH 1118

Query: 205  LFQELGKAMFLPSRRRDDLVNVSPSSKSVASTFASIALDHMNFGGHVNPSGSEASVSAKC 26
            LFQELGKAM LP RRRDD +NVSPSSKSV STFASIALDHMNFGGHVNPSGSE S+S KC
Sbjct: 1119 LFQELGKAMLLP-RRRDDTLNVSPSSKSVVSTFASIALDHMNFGGHVNPSGSEVSISTKC 1177

Query: 25   RYFGKVID 2
            RYFGKVID
Sbjct: 1178 RYFGKVID 1185


>ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223533281|gb|EEF35034.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3666

 Score =  401 bits (1031), Expect = e-109
 Identities = 213/308 (69%), Positives = 226/308 (73%)
 Frame = -1

Query: 925  TMVFKGFTQHHSAPLACAFCSSLRDHLKKALTAFGTVAGSFLLDPRVTPDSGIXXXXXXX 746
            TMVFKGFTQHHSAPLA AFC SLR+HLKKAL  F  V+GSFLLD R TPD GI       
Sbjct: 803  TMVFKGFTQHHSAPLARAFCCSLREHLKKALAGFDAVSGSFLLDSRATPDGGIFSSLFLV 862

Query: 745  XXXXXLAASKDNRWVTALLTEFGNDNKDVLEDIGRVQREVLWQIAFLEDAKLEIEDDVXX 566
                 LAASKDNRWV+ALLT+FGN +KDVLEDIGRV REVLWQIA LEDAKLE+EDD   
Sbjct: 863  EFLLFLAASKDNRWVSALLTDFGNGSKDVLEDIGRVHREVLWQIALLEDAKLEMEDDGTV 922

Query: 565  XXXXXXXXXXXXXXXXXXRFNSFRQFLDPLLRRRMSGWSFESQFFDLINLYRDLTRASSF 386
                              RFNSFRQFLDPLLRRR SGWS ESQ FDLINLYRDL RA+ F
Sbjct: 923  SSADSQQSEVNTNETEDQRFNSFRQFLDPLLRRRTSGWSIESQVFDLINLYRDLGRATGF 982

Query: 385  QQRQGIDGPSNLPVGATXXXXXXXXXXSVGASGKKEDDRQRSYYSSCCDMVKSLSFHITH 206
             QR   DG  N   G+           + GA  KKE DRQRSYY+SCCDMV+SLSFHI H
Sbjct: 983  PQRLSSDGSLNR-FGSIYQPHHSESSDAAGAISKKEYDRQRSYYTSCCDMVRSLSFHIMH 1041

Query: 205  LFQELGKAMFLPSRRRDDLVNVSPSSKSVASTFASIALDHMNFGGHVNPSGSEASVSAKC 26
            LFQELGKAM LPSRRRDD VNVSPSSK VA TFASIALDHMNFGGH N SGSE S+S+KC
Sbjct: 1042 LFQELGKAMLLPSRRRDDTVNVSPSSKVVAGTFASIALDHMNFGGHANSSGSEVSISSKC 1101

Query: 25   RYFGKVID 2
            RYFGKVID
Sbjct: 1102 RYFGKVID 1109


>ref|XP_004163452.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL2-like
            [Cucumis sativus]
          Length = 3666

 Score =  384 bits (987), Expect = e-104
 Identities = 201/308 (65%), Positives = 220/308 (71%)
 Frame = -1

Query: 925  TMVFKGFTQHHSAPLACAFCSSLRDHLKKALTAFGTVAGSFLLDPRVTPDSGIXXXXXXX 746
            TMVFKGFTQHHSAPLA AFCSSLRDHLKKALT F  ++GSFLLDPR TPD  I       
Sbjct: 807  TMVFKGFTQHHSAPLARAFCSSLRDHLKKALTGFDLISGSFLLDPRTTPDEKIFSSLFLV 866

Query: 745  XXXXXLAASKDNRWVTALLTEFGNDNKDVLEDIGRVQREVLWQIAFLEDAKLEIEDDVXX 566
                 LA SKDNRWVTALLTEFGN++KDVLEDIGRV RE+LWQIA LED K E+ED+   
Sbjct: 867  EFLLFLADSKDNRWVTALLTEFGNESKDVLEDIGRVHREILWQIALLEDIKPELEDESTG 926

Query: 565  XXXXXXXXXXXXXXXXXXRFNSFRQFLDPLLRRRMSGWSFESQFFDLINLYRDLTRASSF 386
                              RFNSFRQFLDPLLRRR SGWS ESQFFDLINLYRDL RA S 
Sbjct: 927  SVTDLQNSEVHTNEIEEQRFNSFRQFLDPLLRRRTSGWSIESQFFDLINLYRDLGRAPSS 986

Query: 385  QQRQGIDGPSNLPVGATXXXXXXXXXXSVGASGKKEDDRQRSYYSSCCDMVKSLSFHITH 206
             QR   D  S L  G            + G S +KE   QR+ ++SCCD+V+SLSFH TH
Sbjct: 987  LQRMSSDSSSLLQFGVGNQGLRAGSSDTTGTSNEKECSNQRNCHASCCDLVRSLSFHTTH 1046

Query: 205  LFQELGKAMFLPSRRRDDLVNVSPSSKSVASTFASIALDHMNFGGHVNPSGSEASVSAKC 26
            L QELGK M LPSRRRDD+VNVS SSK+VAST +S+ LDHMNFGGHVN SGSE S+S KC
Sbjct: 1047 LIQELGKVMLLPSRRRDDVVNVSSSSKAVASTLSSLVLDHMNFGGHVNASGSEGSISTKC 1106

Query: 25   RYFGKVID 2
            RYFGKVID
Sbjct: 1107 RYFGKVID 1114


>ref|XP_004152744.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Cucumis sativus]
          Length = 3656

 Score =  384 bits (987), Expect = e-104
 Identities = 201/308 (65%), Positives = 220/308 (71%)
 Frame = -1

Query: 925  TMVFKGFTQHHSAPLACAFCSSLRDHLKKALTAFGTVAGSFLLDPRVTPDSGIXXXXXXX 746
            TMVFKGFTQHHSAPLA AFCSSLRDHLKKALT F  ++GSFLLDPR TPD  I       
Sbjct: 797  TMVFKGFTQHHSAPLARAFCSSLRDHLKKALTGFDLISGSFLLDPRTTPDEKIFSSLFLV 856

Query: 745  XXXXXLAASKDNRWVTALLTEFGNDNKDVLEDIGRVQREVLWQIAFLEDAKLEIEDDVXX 566
                 LA SKDNRWVTALLTEFGN++KDVLEDIGRV RE+LWQIA LED K E+ED+   
Sbjct: 857  EFLLFLADSKDNRWVTALLTEFGNESKDVLEDIGRVHREILWQIALLEDIKPELEDESTG 916

Query: 565  XXXXXXXXXXXXXXXXXXRFNSFRQFLDPLLRRRMSGWSFESQFFDLINLYRDLTRASSF 386
                              RFNSFRQFLDPLLRRR SGWS ESQFFDLINLYRDL RA S 
Sbjct: 917  SVTDLQNSEVHTNEIEEQRFNSFRQFLDPLLRRRTSGWSIESQFFDLINLYRDLGRAPSS 976

Query: 385  QQRQGIDGPSNLPVGATXXXXXXXXXXSVGASGKKEDDRQRSYYSSCCDMVKSLSFHITH 206
             QR   D  S L  G            + G S +KE   QR+ ++SCCD+V+SLSFH TH
Sbjct: 977  LQRMSSDSSSLLQFGVGNQGLRAGSSDTTGTSNEKECSNQRNCHASCCDLVRSLSFHTTH 1036

Query: 205  LFQELGKAMFLPSRRRDDLVNVSPSSKSVASTFASIALDHMNFGGHVNPSGSEASVSAKC 26
            L QELGK M LPSRRRDD+VNVS SSK+VAST +S+ LDHMNFGGHVN SGSE S+S KC
Sbjct: 1037 LIQELGKVMLLPSRRRDDVVNVSSSSKAVASTLSSLVLDHMNFGGHVNASGSEGSISTKC 1096

Query: 25   RYFGKVID 2
            RYFGKVID
Sbjct: 1097 RYFGKVID 1104


>ref|XP_003544252.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Glycine max]
          Length = 3673

 Score =  362 bits (929), Expect = 7e-98
 Identities = 195/309 (63%), Positives = 217/309 (70%), Gaps = 1/309 (0%)
 Frame = -1

Query: 925  TMVFKGFTQHHSAPLACAFCSSLRDHLKKALTAFGTVAGSFLLDPRVTPDSGIXXXXXXX 746
            TMVFKGF QHHS PLA AFCSSLR+HLKKAL   G  +   LLDPR+T D  I       
Sbjct: 838  TMVFKGFAQHHSIPLAHAFCSSLREHLKKALAGLGAASEPLLLDPRMTTDGAIFSSLFLV 897

Query: 745  XXXXXLAASKDNRWVTALLTEFGNDNKDVLEDIGRVQREVLWQIAFLEDAKLEIEDDVXX 566
                 LAA KDNRWVTALLTEFGN  KDVLEDIGRV REVLWQIA LE+ K EIE+D   
Sbjct: 898  EFLLFLAAPKDNRWVTALLTEFGNGGKDVLEDIGRVHREVLWQIALLENRKPEIEED-GA 956

Query: 565  XXXXXXXXXXXXXXXXXXRFNSFRQFLDPLLRRRMSGWSFESQFFDLINLYRDLTRASSF 386
                              R NSFRQFLDPLLRRR SGWS ESQFF+LINLYRDL R++  
Sbjct: 957  CTSDLQQAEGDASETEEQRLNSFRQFLDPLLRRRTSGWSIESQFFNLINLYRDLGRSTGS 1016

Query: 385  QQRQGIDGPSNLPVGATXXXXXXXXXXSVGASGKKEDDRQRSYYSSCCDMVKSLSFHITH 206
            Q R  + GP +    ++          + G + KKE D+QR YY+SCCDMV+SLSFHITH
Sbjct: 1017 QHRSNLVGPRS---SSSNQVQHSGSDDNSGTADKKESDKQRPYYTSCCDMVRSLSFHITH 1073

Query: 205  LFQELGKAMFLPSRRRDDLVNVSPSSKSVASTFASIALDHMNFGGH-VNPSGSEASVSAK 29
            LFQELGK M LPSRRRDD+VNVSP+SKSVASTFASIA DHMN+GG  VN SG+E S+S K
Sbjct: 1074 LFQELGKVMLLPSRRRDDVVNVSPASKSVASTFASIAFDHMNYGGRCVNLSGTEESISTK 1133

Query: 28   CRYFGKVID 2
            CRYFGKVID
Sbjct: 1134 CRYFGKVID 1142


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