BLASTX nr result

ID: Panax21_contig00020067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020067
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54
gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis a...   192   3e-47
gb|AAR15453.1| nuclear division RFT1-like protein [Arabidopsis a...   192   3e-47
ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1...   191   4e-47
ref|XP_002871280.1| hypothetical protein ARALYDRAFT_325378 [Arab...   189   2e-46

>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  215 bits (547), Expect = 3e-54
 Identities = 102/146 (69%), Positives = 121/146 (82%)
 Frame = +3

Query: 3   EAFLHAVATENQLKRSNDYLLIFSLIYLVLNVLLIRSAGAVGLILANSLNMLFRIIYSTV 182
           EAFLHAVATE+QLKRSND LL+FSLIY+V+NVLLI+SAGAVGLILANSLNM+ RIIYS V
Sbjct: 331 EAFLHAVATESQLKRSNDSLLVFSLIYVVMNVLLIKSAGAVGLILANSLNMILRIIYSAV 390

Query: 183 FIRQYFKDTSSFSFRHCLPSGWXXXXXXXXXXXXXEKIFLGRDNFWPTFSIHFSIGVTCF 362
           FI+ YF+D+S+FSF  CLPSGW             EK+FL  +NFWPTF IHFSIG+TCF
Sbjct: 391 FIKYYFQDSSAFSFTSCLPSGWTVLLFSGVITLISEKLFLDHENFWPTFLIHFSIGLTCF 450

Query: 363 CIAAFIIYHRERHFINKVVRFREHAD 440
           CI++FIIY RER FIN+++RFR+H D
Sbjct: 451 CISSFIIYRRERPFINRIIRFRDHMD 476


>gb|AAR15504.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
          Length = 478

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/144 (62%), Positives = 110/144 (76%)
 Frame = +3

Query: 3   EAFLHAVATENQLKRSNDYLLIFSLIYLVLNVLLIRSAGAVGLILANSLNMLFRIIYSTV 182
           EAFLHAV TEN+LKRSND LL+FSLIY+ LN+LLIRSAGA+GLI+ANSLNM+FRIIYS  
Sbjct: 331 EAFLHAVGTENELKRSNDMLLVFSLIYVTLNILLIRSAGAIGLIMANSLNMIFRIIYSGK 390

Query: 183 FIRQYFKDTSSFSFRHCLPSGWXXXXXXXXXXXXXEKIFLGRDNFWPTFSIHFSIGVTCF 362
           FI++YF+ TSSFSFR C P GW             EK  L R NFW TF +HF+IG  CF
Sbjct: 391 FIQRYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKNFWETFPLHFAIGFICF 450

Query: 363 CIAAFIIYHRERHFINKVVRFREH 434
           C++A +IY RER FI +++RFR++
Sbjct: 451 CLSAIVIYRRERVFIKRIIRFRDY 474


>gb|AAR15453.1| nuclear division RFT1-like protein [Arabidopsis arenosa]
          Length = 478

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/144 (62%), Positives = 110/144 (76%)
 Frame = +3

Query: 3   EAFLHAVATENQLKRSNDYLLIFSLIYLVLNVLLIRSAGAVGLILANSLNMLFRIIYSTV 182
           EAFLHAV TEN+LKRSND LL+FSLIY+ LN+LLIRSAGA+GLI+ANSLNM+FRIIYS  
Sbjct: 331 EAFLHAVGTENELKRSNDMLLVFSLIYVTLNILLIRSAGAIGLIMANSLNMIFRIIYSGK 390

Query: 183 FIRQYFKDTSSFSFRHCLPSGWXXXXXXXXXXXXXEKIFLGRDNFWPTFSIHFSIGVTCF 362
           FI++YF+ TSSFSFR C P GW             EK  L R NFW TF +HF+IG  CF
Sbjct: 391 FIQRYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKNFWETFPLHFAIGFICF 450

Query: 363 CIAAFIIYHRERHFINKVVRFREH 434
           C++A +IY RER FI +++RFR++
Sbjct: 451 CLSAIVIYRRERVFIKRIIRFRDY 474


>ref|XP_003540577.1| PREDICTED: LOW QUALITY PROTEIN: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  191 bits (486), Expect = 4e-47
 Identities = 88/146 (60%), Positives = 113/146 (77%)
 Frame = +3

Query: 3   EAFLHAVATENQLKRSNDYLLIFSLIYLVLNVLLIRSAGAVGLILANSLNMLFRIIYSTV 182
           EAF+HAVATE+QLKRSND LL+FSLIY+VLNVLLIRSAGAVGLI+ANSLNM  RI+YS +
Sbjct: 373 EAFMHAVATESQLKRSNDSLLVFSLIYIVLNVLLIRSAGAVGLIMANSLNMTLRILYSAI 432

Query: 183 FIRQYFKDTSSFSFRHCLPSGWXXXXXXXXXXXXXEKIFLGRDNFWPTFSIHFSIGVTCF 362
           FI+ YF+ +SSFSF  CLPSGW             E + L RDNF P+F +H S+G+ CF
Sbjct: 433 FIKNYFQGSSSFSFYGCLPSGWIALLLSGVITLISENVLLDRDNFXPSFILHLSVGLVCF 492

Query: 363 CIAAFIIYHRERHFINKVVRFREHAD 440
           C+++++IY RE+ FI +++RF +H D
Sbjct: 493 CVSSYVIYCREKPFIRRIIRFNDHVD 518


>ref|XP_002871280.1| hypothetical protein ARALYDRAFT_325378 [Arabidopsis lyrata subsp.
           lyrata] gi|297317117|gb|EFH47539.1| hypothetical protein
           ARALYDRAFT_325378 [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/144 (61%), Positives = 108/144 (75%)
 Frame = +3

Query: 3   EAFLHAVATENQLKRSNDYLLIFSLIYLVLNVLLIRSAGAVGLILANSLNMLFRIIYSTV 182
           EAFLHAV TEN+LKRSND LL+FSLIY+ LN+LLIRSAGA+GLI+ANSLNM+FRIIYS  
Sbjct: 331 EAFLHAVGTENELKRSNDMLLVFSLIYVALNILLIRSAGAIGLIMANSLNMIFRIIYSGK 390

Query: 183 FIRQYFKDTSSFSFRHCLPSGWXXXXXXXXXXXXXEKIFLGRDNFWPTFSIHFSIGVTCF 362
           FI+ YF+ TSSFSFR C P GW             EK  L R NFW TF +HF+IG  CF
Sbjct: 391 FIQHYFQGTSSFSFRKCFPLGWQILILSSIITLISEKTILDRKNFWETFPLHFAIGFICF 450

Query: 363 CIAAFIIYHRERHFINKVVRFREH 434
           C++A +IY RER FI +++ FR++
Sbjct: 451 CLSAIVIYRRERVFIKRIIHFRDY 474


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