BLASTX nr result

ID: Panax21_contig00020066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020066
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48784.1| unknown [Lotus japonicus]                              205   7e-51
ref|XP_002311895.1| predicted protein [Populus trichocarpa] gi|2...   205   1e-50
ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis...   202   8e-50
ref|XP_002513313.1| conserved hypothetical protein [Ricinus comm...   202   8e-50
ref|XP_004164355.1| PREDICTED: reticulon-like protein B22-like [...   199   4e-49

>gb|AFK48784.1| unknown [Lotus japonicus]
          Length = 183

 Score =  205 bits (522), Expect = 7e-51
 Identities = 105/173 (60%), Positives = 126/173 (72%)
 Frame = +2

Query: 77  RKSRRGVEILGGEVAGKTMIGIICGGLVYYHCAYRNSSLLSLLSDVFIVLLCSLAILGLL 256
           R+  R    +G    GK +I ++CG LVYYHCAYRNS+++SL SDVFIVLLCSLAILGLL
Sbjct: 7   RELERKTTSVGEREMGKAIIALVCGTLVYYHCAYRNSTVVSLFSDVFIVLLCSLAILGLL 66

Query: 257 FRQMNISVPVDPLEWQISQDTANSIFACLANTIGAAESVLRVAATGQDNRLFFKVVASLY 436
           FRQMNI VPVDPLEWQISQDTAN+I ACLANT+GAAESVLRVAATG D RLFFKV+  LY
Sbjct: 67  FRQMNIQVPVDPLEWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFFKVILCLY 126

Query: 437 MLSVLGRVVSGVTVXXXXXXXXXXXXXXENSPSITSCLLWLAGRSDGSNSVLD 595
           +LS +GR+  G+T+              E S SI+S + WL GR + ++   D
Sbjct: 127 VLSAIGRLALGITIAYAGLCLFCLYMLAECSQSISSGVGWLVGRRNYASGEQD 179


>ref|XP_002311895.1| predicted protein [Populus trichocarpa] gi|222851715|gb|EEE89262.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  205 bits (521), Expect = 1e-50
 Identities = 107/157 (68%), Positives = 122/157 (77%)
 Frame = +2

Query: 107 GGEVAGKTMIGIICGGLVYYHCAYRNSSLLSLLSDVFIVLLCSLAILGLLFRQMNISVPV 286
           GGE+ GK +IG++ G LVYYHCAYR+SSL SL+SDV IVLLCSLAILGLLFRQ+NISVPV
Sbjct: 19  GGEI-GKALIGLVSGTLVYYHCAYRDSSLFSLMSDVLIVLLCSLAILGLLFRQLNISVPV 77

Query: 287 DPLEWQISQDTANSIFACLANTIGAAESVLRVAATGQDNRLFFKVVASLYMLSVLGRVVS 466
           DPLEWQISQDTANSI A  ANTIGAAESVLRVAATG D RLFFKV+  LY+LS LGR+VS
Sbjct: 78  DPLEWQISQDTANSIVAWFANTIGAAESVLRVAATGHDKRLFFKVIVCLYVLSALGRLVS 137

Query: 467 GVTVXXXXXXXXXXXXXXENSPSITSCLLWLAGRSDG 577
           GVT+              ENS S ++C+    GR +G
Sbjct: 138 GVTIAYAALCLFCLYMLAENSQSGSACISRFLGRGNG 174


>ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis vinifera]
           gi|297735759|emb|CBI18446.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  202 bits (513), Expect = 8e-50
 Identities = 105/151 (69%), Positives = 118/151 (78%)
 Frame = +2

Query: 122 GKTMIGIICGGLVYYHCAYRNSSLLSLLSDVFIVLLCSLAILGLLFRQMNISVPVDPLEW 301
           GK +I +ICG L+YYHCAYRNS+LL+L+SDV IVLLCSLAILGLLFRQ+NISVPVDPLEW
Sbjct: 8   GKPVIVMICGTLIYYHCAYRNSTLLTLVSDVLIVLLCSLAILGLLFRQINISVPVDPLEW 67

Query: 302 QISQDTANSIFACLANTIGAAESVLRVAATGQDNRLFFKVVASLYMLSVLGRVVSGVTVX 481
           QISQDTAN+I AC+ANTIGAAESVLRVAATG D RLF KVV  LY+LS LGRVVSGVTV 
Sbjct: 68  QISQDTANNIVACMANTIGAAESVLRVAATGHDKRLFVKVVVCLYVLSALGRVVSGVTVA 127

Query: 482 XXXXXXXXXXXXXENSPSITSCLLWLAGRSD 574
                        ENS +I +C+     R D
Sbjct: 128 YAGLWLFCLYMFAENSQTICACMSRFMRRRD 158


>ref|XP_002513313.1| conserved hypothetical protein [Ricinus communis]
           gi|223547221|gb|EEF48716.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 169

 Score =  202 bits (513), Expect = 8e-50
 Identities = 108/155 (69%), Positives = 119/155 (76%), Gaps = 2/155 (1%)
 Frame = +2

Query: 122 GKTMIGIICGGLVYYHCAYRNSSLLSLLSDVFIVLLCSLAILGLLFRQMNISVPVDPLEW 301
           GK +IG++CG LVYYHCAYRN+SLLSLLSDV IVLLCSLAILGLLFRQMNISVPVDPLEW
Sbjct: 11  GKAIIGMVCGTLVYYHCAYRNASLLSLLSDVLIVLLCSLAILGLLFRQMNISVPVDPLEW 70

Query: 302 QISQDTANSIFACLANTIGAAESVLRVAATGQDNRLFFKVVASLYMLSVLGRVVSGVTVX 481
           QISQDTANSI A  ANTIGAAESVLRVAATG D RLFFKVV SLY++S LGR++SG TV 
Sbjct: 71  QISQDTANSIVAWFANTIGAAESVLRVAATGHDKRLFFKVVISLYVISALGRLISGFTVA 130

Query: 482 XXXXXXXXXXXXXE--NSPSITSCLLWLAGRSDGS 580
                        E  NS S T C+     R++ S
Sbjct: 131 YAALCLFCFYILAENSNSQSSTGCISRFLRRANAS 165


>ref|XP_004164355.1| PREDICTED: reticulon-like protein B22-like [Cucumis sativus]
          Length = 188

 Score =  199 bits (507), Expect = 4e-49
 Identities = 105/159 (66%), Positives = 120/159 (75%)
 Frame = +2

Query: 122 GKTMIGIICGGLVYYHCAYRNSSLLSLLSDVFIVLLCSLAILGLLFRQMNISVPVDPLEW 301
           GK  + +ICG LVYYHCA+RNSSLLSL++DVFIVLLCSLAILGLLFR MN+SVPVDPLEW
Sbjct: 29  GKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEW 88

Query: 302 QISQDTANSIFACLANTIGAAESVLRVAATGQDNRLFFKVVASLYMLSVLGRVVSGVTVX 481
           Q+SQDTANS+ A LANTIGAAESVLRVAATG D RLF KVV  LY LSVLGR+VSGVTV 
Sbjct: 89  QVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVA 148

Query: 482 XXXXXXXXXXXXXENSPSITSCLLWLAGRSDGSNSVLDN 598
                        ENS SI++ +  +  R +   S  D+
Sbjct: 149 YTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDD 187


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