BLASTX nr result

ID: Panax21_contig00020036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020036
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302078.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
ref|XP_002280151.1| PREDICTED: uncharacterized protein LOC100261...   165   1e-38
ref|XP_002531666.1| conserved hypothetical protein [Ricinus comm...   154   2e-35
ref|XP_003536806.1| PREDICTED: uncharacterized protein LOC100791...   148   9e-34
ref|XP_003590539.1| Sec-independent protein translocase protein ...   132   7e-29

>ref|XP_002302078.1| predicted protein [Populus trichocarpa] gi|222843804|gb|EEE81351.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  171 bits (434), Expect = 1e-40
 Identities = 100/183 (54%), Positives = 115/183 (62%), Gaps = 5/183 (2%)
 Frame = +3

Query: 174 GPKDFPXXXXXXXXXXXXXXXYVQLARGQFENVMQQSQAQQVHKELQDTMAQLDAICHEI 353
           GPKD P               YVQ+ARGQF++VMQQSQA+QVHKELQDTMAQLDAI HEI
Sbjct: 21  GPKDLPLIARTAGRLTGRAIGYVQMARGQFDSVMQQSQARQVHKELQDTMAQLDAIRHEI 80

Query: 354 RSVSFMNPGPLTRRLVDSLDRSSATNGTMEPE----XXXXXXXXXXXXXXXXXXXXXXXX 521
           RS+S +NPGPLTRRLVD+LD    TN    PE                            
Sbjct: 81  RSISVLNPGPLTRRLVDNLDPPPTTNAGGAPENADAENVPNPTISKVYTEQTAGEISDSC 140

Query: 522 NIHSQATAYERLAGSAASESGSMNSEA-FNELTGASGLLNVLPVSAESAGLLPNRRDDIN 698
           ++HSQATAY RLA S+A ++G + S A   ELT   GLLNVLPVSAES GLLPNR+D +N
Sbjct: 141 DLHSQATAYARLAESSALKTGPVRSGAGAGELTSDIGLLNVLPVSAESTGLLPNRQDVVN 200

Query: 699 GSD 707
           GSD
Sbjct: 201 GSD 203


>ref|XP_002280151.1| PREDICTED: uncharacterized protein LOC100261325 [Vitis vinifera]
           gi|297737157|emb|CBI26358.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  165 bits (417), Expect = 1e-38
 Identities = 97/180 (53%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
 Frame = +3

Query: 174 GPKDFPXXXXXXXXXXXXXXXYVQLARGQFENVMQQSQAQQVHKELQDTMAQLDAICHEI 353
           GPKD P               YVQLARGQFENVMQQSQA+QVHKELQDTMAQLDAI +EI
Sbjct: 21  GPKDLPMIARTAGRLAGRAIGYVQLARGQFENVMQQSQARQVHKELQDTMAQLDAIRYEI 80

Query: 354 RSVSFMNPGPLTRRLVD-SLDRSSATNGTMEPEXXXXXXXXXXXXXXXXXXXXXXXXNIH 530
           RS+S MNPGP+TRRL++ SL+ +S +N    PE                        N+H
Sbjct: 81  RSLSLMNPGPMTRRLMENSLETTSHSNDNAVPE----KQEEQKAKNVDQSFKTSGSINLH 136

Query: 531 SQATAYERLAGSAASESGS-MNSEAFNELTGASGLLNVLPVSAESAGLLPNRRDDINGSD 707
           SQATA+ +LA SAA ++G  M+S    +L   +GLL VLPVSAESAGLLPNR+D + GSD
Sbjct: 137 SQATAFAKLAESAAQKTGPLMSSAEMEKLDDETGLLAVLPVSAESAGLLPNRKDSMKGSD 196


>ref|XP_002531666.1| conserved hypothetical protein [Ricinus communis]
           gi|223528697|gb|EEF30710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 236

 Score =  154 bits (388), Expect = 2e-35
 Identities = 93/191 (48%), Positives = 113/191 (59%), Gaps = 13/191 (6%)
 Frame = +3

Query: 174 GPKDFPXXXXXXXXXXXXXXXYVQLARGQFENVMQQSQAQQVHKELQDTMAQLDAICHEI 353
           G KD P               YVQLARGQ ENVMQQSQA+QVHKELQDTMAQL+AI HEI
Sbjct: 21  GSKDLPIISRTAGRLAGRAIGYVQLARGQLENVMQQSQARQVHKELQDTMAQLEAIRHEI 80

Query: 354 RSVSFMNPGPLTRRLVDSLDRSSATNGTMEP-----EXXXXXXXXXXXXXXXXXXXXXXX 518
           RSVS +NPGPLTRRLVD++D +S +N  + P     E                       
Sbjct: 81  RSVSILNPGPLTRRLVDNIDHTSNSNDNIVPNSQDAENKPKATISKHCTEPTNGGSIPTP 140

Query: 519 XN--------IHSQATAYERLAGSAASESGSMNSEAFNELTGASGLLNVLPVSAESAGLL 674
            N        +HSQATA+ RLA S+A ++G+   E  ++    + LLNVLP+SAES G+L
Sbjct: 141 KNSKTSDLCIMHSQATAHARLAESSALKTGTDAGELIDD----ASLLNVLPLSAESTGML 196

Query: 675 PNRRDDINGSD 707
           PNR DD+ GSD
Sbjct: 197 PNRPDDVKGSD 207


>ref|XP_003536806.1| PREDICTED: uncharacterized protein LOC100791066 [Glycine max]
          Length = 224

 Score =  148 bits (374), Expect = 9e-34
 Identities = 86/178 (48%), Positives = 103/178 (57%)
 Frame = +3

Query: 174 GPKDFPXXXXXXXXXXXXXXXYVQLARGQFENVMQQSQAQQVHKELQDTMAQLDAICHEI 353
           GPKD P               YVQLARGQF+ VMQQSQA+QVHKELQDTMAQLDAI HEI
Sbjct: 21  GPKDLPIICRTAGRLAGRAIGYVQLARGQFDTVMQQSQARQVHKELQDTMAQLDAIRHEI 80

Query: 354 RSVSFMNPGPLTRRLVDSLDRSSATNGTMEPEXXXXXXXXXXXXXXXXXXXXXXXXNIHS 533
           RS+S +NPGPLTRRLVD  D++S +N + +PE                        ++ +
Sbjct: 81  RSISIINPGPLTRRLVDDPDQTSISNESRKPEESGQENSSIPTVMKDSTSMSSNSCHMQN 140

Query: 534 QATAYERLAGSAASESGSMNSEAFNELTGASGLLNVLPVSAESAGLLPNRRDDINGSD 707
           QAT Y RL  S A ++    S    E       L VLP+SAE+AGLLP R  D+ GSD
Sbjct: 141 QATIYSRLVNSPAIKNELSASSTEVEKIEDKLQLTVLPISAENAGLLPIRGADVKGSD 198


>ref|XP_003590539.1| Sec-independent protein translocase protein tatB-like protein
           [Medicago truncatula] gi|355479587|gb|AES60790.1|
           Sec-independent protein translocase protein tatB-like
           protein [Medicago truncatula]
          Length = 223

 Score =  132 bits (332), Expect = 7e-29
 Identities = 83/179 (46%), Positives = 103/179 (57%), Gaps = 1/179 (0%)
 Frame = +3

Query: 174 GPKDFPXXXXXXXXXXXXXXXYVQLARGQFENVMQQSQAQQVHKELQDTMAQLDAICHEI 353
           GPKD P               YVQLARGQF++VMQ+SQ  QVHKELQ+TMAQL+AI HEI
Sbjct: 21  GPKDLPMISRTAGRLAGRAVGYVQLARGQFDSVMQRSQVNQVHKELQETMAQLEAIRHEI 80

Query: 354 RSVSFMNPGPLTRRLVDSLDRSSATNGTMEPEXXXXXXXXXXXXXXXXXXXXXXXXNIHS 533
            S+SF+NPGP TRR  D+LD++S +N   +PE                        N+ S
Sbjct: 81  GSISFINPGPSTRR-HDNLDQASISNDNRKPE-YAGVNNSISSHTKDSTSLPSKSLNMQS 138

Query: 534 QATAYERLAGSAASESGSMNSEAFNELTGASGLLNVLPVSAESAGLLPNRRD-DINGSD 707
           QATAY  LA + A ++GS  +    E       L V+PVSAE+ GLLPNR   D+ GSD
Sbjct: 139 QATAYASLAQAPAVKNGSSANSTEVEDVKVGLQLIVMPVSAENTGLLPNRGGADVKGSD 197


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