BLASTX nr result

ID: Panax21_contig00020013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020013
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512482.1| ATP-binding cassette transporter, putative [...    62   4e-08
ref|XP_004156150.1| PREDICTED: pleiotropic drug resistance prote...    60   2e-07
ref|XP_004140460.1| PREDICTED: pleiotropic drug resistance prote...    60   2e-07
ref|XP_002314994.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
emb|CAN65735.1| hypothetical protein VITISV_037751 [Vitis vinifera]    60   2e-07

>ref|XP_002512482.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223548443|gb|EEF49934.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1458

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 116 VRGEISYNDKKLENLRPQETSAYISQYNLHLPEMTVRE 3
           VRGEISYN  +LE   PQ+TSAYISQY+LH+PEMTVRE
Sbjct: 218 VRGEISYNGYRLEEFVPQKTSAYISQYDLHIPEMTVRE 255


>ref|XP_004156150.1| PREDICTED: pleiotropic drug resistance protein 3-like [Cucumis
           sativus]
          Length = 811

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = -2

Query: 116 VRGEISYNDKKLENLRPQETSAYISQYNLHLPEMTVRE 3
           +RG+I YN +KLE   PQ+TSAYISQY+LH+PEMTVRE
Sbjct: 224 MRGQICYNGQKLEEFVPQKTSAYISQYDLHIPEMTVRE 261


>ref|XP_004140460.1| PREDICTED: pleiotropic drug resistance protein 3-like [Cucumis
           sativus]
          Length = 1440

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = -2

Query: 116 VRGEISYNDKKLENLRPQETSAYISQYNLHLPEMTVRE 3
           +RG+I YN +KLE   PQ+TSAYISQY+LH+PEMTVRE
Sbjct: 224 MRGQICYNGQKLEEFVPQKTSAYISQYDLHIPEMTVRE 261


>ref|XP_002314994.1| predicted protein [Populus trichocarpa] gi|222864034|gb|EEF01165.1|
           predicted protein [Populus trichocarpa]
          Length = 1362

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 116 VRGEISYNDKKLENLRPQETSAYISQYNLHLPEMTVRE 3
           V GEISYN  KL+   PQ+TSAYISQY+LH+PEMTVRE
Sbjct: 185 VEGEISYNGYKLDEFVPQKTSAYISQYDLHIPEMTVRE 222


>emb|CAN65735.1| hypothetical protein VITISV_037751 [Vitis vinifera]
          Length = 1417

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -2

Query: 116 VRGEISYNDKKLENLRPQETSAYISQYNLHLPEMTVRE 3
           V GE+SYN  K+E   PQ+TSAYISQY+LH+PEMTVRE
Sbjct: 225 VTGEVSYNGYKMEEFVPQKTSAYISQYDLHIPEMTVRE 262


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