BLASTX nr result

ID: Panax21_contig00020009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020009
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78595.1| cellulose synthase-like protein [Populus tomentosa]    174   2e-41
ref|XP_002307850.1| predicted protein [Populus trichocarpa] gi|2...   174   2e-41
ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E...   169   7e-40
emb|CBI39755.3| unnamed protein product [Vitis vinifera]              169   7e-40
ref|XP_003635361.1| PREDICTED: cellulose synthase-like protein E...   166   4e-39

>gb|AFZ78595.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 732

 Score =  174 bits (442), Expect = 2e-41
 Identities = 80/124 (64%), Positives = 97/124 (78%), Gaps = 8/124 (6%)
 Frame = -3

Query: 351 WASFHWYVNFLLNMDPTNIY--------RYEKELPGVDIFVCTADPTVEPPIMVINTVLS 196
           W SF+W++  L+  +P   Y        RYEK+LPGVDIFVCTADP +EPP MVINTVLS
Sbjct: 63  WFSFYWFITQLVRWNPIYRYTFKDRLSQRYEKDLPGVDIFVCTADPEIEPPTMVINTVLS 122

Query: 195 VMAYDYPPEKLSVYLSDDGGSELTFYALLEASLFSKHWISYCKKYRVEPRSPAAYFTTSH 16
           +MAYDYPPEKLSVYLSDDGGS+LTFYA+LEAS FSKHW+ +CK ++++PRSP AYF T+ 
Sbjct: 123 MMAYDYPPEKLSVYLSDDGGSDLTFYAMLEASRFSKHWLPFCKNFKIQPRSPEAYFRTAL 182

Query: 15  HSAD 4
              D
Sbjct: 183 EPLD 186


>ref|XP_002307850.1| predicted protein [Populus trichocarpa] gi|222853826|gb|EEE91373.1|
           predicted protein [Populus trichocarpa]
          Length = 732

 Score =  174 bits (442), Expect = 2e-41
 Identities = 80/124 (64%), Positives = 97/124 (78%), Gaps = 8/124 (6%)
 Frame = -3

Query: 351 WASFHWYVNFLLNMDPTNIY--------RYEKELPGVDIFVCTADPTVEPPIMVINTVLS 196
           W SF+W++  L+  +P   Y        RYEK+LPGVDIFVCTADP +EPP MVINTVLS
Sbjct: 63  WFSFYWFITQLVRWNPIYRYTFKDRLSQRYEKDLPGVDIFVCTADPEIEPPTMVINTVLS 122

Query: 195 VMAYDYPPEKLSVYLSDDGGSELTFYALLEASLFSKHWISYCKKYRVEPRSPAAYFTTSH 16
           +MAYDYPPEKLSVYLSDDGGS+LTFYA+LEAS FSKHW+ +CK ++++PRSP AYF T+ 
Sbjct: 123 MMAYDYPPEKLSVYLSDDGGSDLTFYAMLEASRFSKHWLPFCKNFKIQPRSPEAYFRTAL 182

Query: 15  HSAD 4
              D
Sbjct: 183 EPLD 186


>ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E1 [Vitis vinifera]
          Length = 922

 Score =  169 bits (428), Expect = 7e-40
 Identities = 87/133 (65%), Positives = 98/133 (73%), Gaps = 12/133 (9%)
 Frame = -3

Query: 366 VIAIYWASFHWYVNFLLNMDPTNIYR----------YEKELPGVDIFVCTADPTVEPPIM 217
           ++A  W   +W V      +P  IYR          YEK+LP VDIFVCTADP +EPPIM
Sbjct: 56  LLAELWFGLYWLVTQASRWNP--IYRSTFKDRLSQRYEKDLPAVDIFVCTADPVIEPPIM 113

Query: 216 VINTVLSVMAYDYPPEKLSVYLSDDGGSELTFYALLEASLFSKHWISYCKKYRVEPRSPA 37
           V+NTVLSVMAYDYP EKL VYLSDD GSELTFYALLEAS FSKHWI YCKK+++EPRSPA
Sbjct: 114 VVNTVLSVMAYDYPQEKLGVYLSDDAGSELTFYALLEASHFSKHWIPYCKKFKIEPRSPA 173

Query: 36  AYFT-TSH-HSAD 4
            YF+ TSH H AD
Sbjct: 174 VYFSLTSHLHDAD 186


>emb|CBI39755.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  169 bits (428), Expect = 7e-40
 Identities = 87/133 (65%), Positives = 98/133 (73%), Gaps = 12/133 (9%)
 Frame = -3

Query: 366 VIAIYWASFHWYVNFLLNMDPTNIYR----------YEKELPGVDIFVCTADPTVEPPIM 217
           ++A  W   +W V      +P  IYR          YEK+LP VDIFVCTADP +EPPIM
Sbjct: 34  LLAELWFGLYWLVTQASRWNP--IYRSTFKDRLSQRYEKDLPAVDIFVCTADPVIEPPIM 91

Query: 216 VINTVLSVMAYDYPPEKLSVYLSDDGGSELTFYALLEASLFSKHWISYCKKYRVEPRSPA 37
           V+NTVLSVMAYDYP EKL VYLSDD GSELTFYALLEAS FSKHWI YCKK+++EPRSPA
Sbjct: 92  VVNTVLSVMAYDYPQEKLGVYLSDDAGSELTFYALLEASHFSKHWIPYCKKFKIEPRSPA 151

Query: 36  AYFT-TSH-HSAD 4
            YF+ TSH H AD
Sbjct: 152 VYFSLTSHLHDAD 164


>ref|XP_003635361.1| PREDICTED: cellulose synthase-like protein E6-like [Vitis vinifera]
          Length = 735

 Score =  166 bits (421), Expect = 4e-39
 Identities = 78/122 (63%), Positives = 95/122 (77%), Gaps = 8/122 (6%)
 Frame = -3

Query: 345 SFHWYVNFLLNMDPTNIY--------RYEKELPGVDIFVCTADPTVEPPIMVINTVLSVM 190
           SF+W++  L+   P   Y        RYE+ LPG+DIFVCTADP +EPPIMVINTVLSVM
Sbjct: 67  SFYWFLTQLVRWSPIYRYTFKDRLSQRYEEVLPGIDIFVCTADPRIEPPIMVINTVLSVM 126

Query: 189 AYDYPPEKLSVYLSDDGGSELTFYALLEASLFSKHWISYCKKYRVEPRSPAAYFTTSHHS 10
           AY+YP + LSVYLSDDGGS+LTFYALLEAS FSKHW+ +C+K+ +EPRSPAAYF+T+   
Sbjct: 127 AYNYPSQNLSVYLSDDGGSDLTFYALLEASRFSKHWLPFCRKFSIEPRSPAAYFSTTSEP 186

Query: 9   AD 4
            D
Sbjct: 187 PD 188


Top