BLASTX nr result

ID: Panax21_contig00020005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020005
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314271.1| predicted protein [Populus trichocarpa] gi|2...   342   6e-92
ref|XP_002530289.1| RNA m5u methyltransferase, putative [Ricinus...   338   8e-91
ref|XP_002282314.2| PREDICTED: zinc finger CCCH domain-containin...   337   1e-90
emb|CBI16305.3| unnamed protein product [Vitis vinifera]              337   1e-90
ref|XP_004145739.1| PREDICTED: zinc finger CCCH domain-containin...   317   3e-84

>ref|XP_002314271.1| predicted protein [Populus trichocarpa] gi|222850679|gb|EEE88226.1|
            predicted protein [Populus trichocarpa]
          Length = 830

 Score =  342 bits (877), Expect = 6e-92
 Identities = 169/241 (70%), Positives = 204/241 (84%)
 Frame = +1

Query: 91   VREGRMPGKTTELENLEANIAEVLLMVQVSSAGFDDGVVNDELEKMARAFTAGAYSNSPP 270
            VREGR+P K  ++   EA+I+EV+L+VQVSS GFDD ++ +EL  +A AFT GA  ++PP
Sbjct: 421  VREGRLPRKAADIAIPEAHISEVMLIVQVSSVGFDDDMITNELRGLAHAFTTGAAGSAPP 480

Query: 271  LPLTALLVQDHKGISNVAPADAPLRSLSIPKAESETELQEANDVGEARIHDYISNLQFRI 450
            LPLTAL++QDH+G+SNVAPADAPLR+L +P A   +E+Q  ++V EARIHDYISNL+F I
Sbjct: 481  LPLTALVIQDHQGLSNVAPADAPLRTLLLPNANGGSEVQATSNVAEARIHDYISNLRFSI 540

Query: 451  SPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDICCGTGTIGLTLAHRVGTVVGIAMNA 630
            SPTAFFQVNTLAAEKLYSLAGDWAGLGPD+LLFDICCGTGTIGLTLA RVG VVGI MNA
Sbjct: 541  SPTAFFQVNTLAAEKLYSLAGDWAGLGPDSLLFDICCGTGTIGLTLADRVGMVVGIEMNA 600

Query: 631  SAVSDAIRNAEINGIKNCRFVYSKAEDVMGSLLKEYLNLPQKQDEIPNSSDTNDEEVTAT 810
            SAVSDA RNAEINGIKNCRFV +KAEDV+GSLLKEYL++PQK+ E  N+S+  D+E+   
Sbjct: 601  SAVSDAHRNAEINGIKNCRFVCAKAEDVIGSLLKEYLDVPQKEGEQLNASEIRDKEIAMV 660

Query: 811  D 813
            +
Sbjct: 661  E 661


>ref|XP_002530289.1| RNA m5u methyltransferase, putative [Ricinus communis]
            gi|223530187|gb|EEF32096.1| RNA m5u methyltransferase,
            putative [Ricinus communis]
          Length = 863

 Score =  338 bits (867), Expect = 8e-91
 Identities = 166/241 (68%), Positives = 203/241 (84%)
 Frame = +1

Query: 91   VREGRMPGKTTELENLEANIAEVLLMVQVSSAGFDDGVVNDELEKMARAFTAGAYSNSPP 270
            VREGR+P K  +++  + N++E++L+VQV  AGFDD ++N EL ++A AFT GA +NSPP
Sbjct: 454  VREGRLPEKDADIKG-DVNMSEIMLIVQVCLAGFDDELINSELWRLAHAFTTGAAANSPP 512

Query: 271  LPLTALLVQDHKGISNVAPADAPLRSLSIPKAESETELQEANDVGEARIHDYISNLQFRI 450
            LPL  L++QDH+GISNVAPADAPLR L +P  ES +E +   +V EARIHD+I+NL+F I
Sbjct: 513  LPLKVLVLQDHQGISNVAPADAPLRILPLPNVESSSEAEATKNVVEARIHDHINNLRFSI 572

Query: 451  SPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDICCGTGTIGLTLAHRVGTVVGIAMNA 630
            SPTAFFQVNTLAAE+LYSLAGDWAGLGPDTLLFDICCGTGTIGLTLAHRVG VVGI MNA
Sbjct: 573  SPTAFFQVNTLAAERLYSLAGDWAGLGPDTLLFDICCGTGTIGLTLAHRVGMVVGIEMNA 632

Query: 631  SAVSDAIRNAEINGIKNCRFVYSKAEDVMGSLLKEYLNLPQKQDEIPNSSDTNDEEVTAT 810
            SAVSDA RNAEINGI+NCRF+ +KAE VM SLLKEYLN PQKQDE+  + +T+D+++TA 
Sbjct: 633  SAVSDAHRNAEINGIRNCRFICAKAESVMASLLKEYLNEPQKQDEVSYAGETSDKDLTAC 692

Query: 811  D 813
            +
Sbjct: 693  E 693


>ref|XP_002282314.2| PREDICTED: zinc finger CCCH domain-containing protein 24-like [Vitis
            vinifera]
          Length = 843

 Score =  337 bits (865), Expect = 1e-90
 Identities = 171/241 (70%), Positives = 203/241 (84%)
 Frame = +1

Query: 91   VREGRMPGKTTELENLEANIAEVLLMVQVSSAGFDDGVVNDELEKMARAFTAGAYSNSPP 270
            VREGR PGK  E +  E +I+EVL+MVQV S G DD ++N E E++A+AFT GA ++SP 
Sbjct: 434  VREGRKPGKAAEAKISEPSISEVLVMVQVCSKGIDDEILNGEFERLAQAFTMGATASSP- 492

Query: 271  LPLTALLVQDHKGISNVAPADAPLRSLSIPKAESETELQEANDVGEARIHDYISNLQFRI 450
            LPLTAL+VQDHKGISNVA ADAPLR L IPK  S++       + EARIHDYISNL+F I
Sbjct: 493  LPLTALVVQDHKGISNVASADAPLRPLPIPKEGSDSGPDAGGQIVEARIHDYISNLRFCI 552

Query: 451  SPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDICCGTGTIGLTLAHRVGTVVGIAMNA 630
            SPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFD+CCGTGTIGLTLAHRVG VVGI MNA
Sbjct: 553  SPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDVCCGTGTIGLTLAHRVGMVVGIEMNA 612

Query: 631  SAVSDAIRNAEINGIKNCRFVYSKAEDVMGSLLKEYLNLPQKQDEIPNSSDTNDEEVTAT 810
            SAVSDA RNAE+NGIKNCRFV +KAEDVMGSLLKEYL++PQ+Q+E+P+ S ++D+ ++ +
Sbjct: 613  SAVSDAQRNAELNGIKNCRFVCAKAEDVMGSLLKEYLSVPQRQNEVPDFSQSDDKVISNS 672

Query: 811  D 813
            +
Sbjct: 673  E 673


>emb|CBI16305.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score =  337 bits (865), Expect = 1e-90
 Identities = 171/241 (70%), Positives = 203/241 (84%)
 Frame = +1

Query: 91   VREGRMPGKTTELENLEANIAEVLLMVQVSSAGFDDGVVNDELEKMARAFTAGAYSNSPP 270
            VREGR PGK  E +  E +I+EVL+MVQV S G DD ++N E E++A+AFT GA ++SP 
Sbjct: 410  VREGRKPGKAAEAKISEPSISEVLVMVQVCSKGIDDEILNGEFERLAQAFTMGATASSP- 468

Query: 271  LPLTALLVQDHKGISNVAPADAPLRSLSIPKAESETELQEANDVGEARIHDYISNLQFRI 450
            LPLTAL+VQDHKGISNVA ADAPLR L IPK  S++       + EARIHDYISNL+F I
Sbjct: 469  LPLTALVVQDHKGISNVASADAPLRPLPIPKEGSDSGPDAGGQIVEARIHDYISNLRFCI 528

Query: 451  SPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDICCGTGTIGLTLAHRVGTVVGIAMNA 630
            SPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFD+CCGTGTIGLTLAHRVG VVGI MNA
Sbjct: 529  SPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDVCCGTGTIGLTLAHRVGMVVGIEMNA 588

Query: 631  SAVSDAIRNAEINGIKNCRFVYSKAEDVMGSLLKEYLNLPQKQDEIPNSSDTNDEEVTAT 810
            SAVSDA RNAE+NGIKNCRFV +KAEDVMGSLLKEYL++PQ+Q+E+P+ S ++D+ ++ +
Sbjct: 589  SAVSDAQRNAELNGIKNCRFVCAKAEDVMGSLLKEYLSVPQRQNEVPDFSQSDDKVISNS 648

Query: 811  D 813
            +
Sbjct: 649  E 649


>ref|XP_004145739.1| PREDICTED: zinc finger CCCH domain-containing protein 24-like
            [Cucumis sativus]
          Length = 889

 Score =  317 bits (811), Expect = 3e-84
 Identities = 161/241 (66%), Positives = 195/241 (80%)
 Frame = +1

Query: 91   VREGRMPGKTTELENLEANIAEVLLMVQVSSAGFDDGVVNDELEKMARAFTAGAYSNSPP 270
            VREGR PGK  + +N +A+I+EV+L+VQV S G +  ++  E +++A+AF  G+ +NSPP
Sbjct: 446  VREGRAPGKLIDSDNSDASISEVMLIVQVCSVGVESELMTSEFKRLAQAFAEGSVANSPP 505

Query: 271  LPLTALLVQDHKGISNVAPADAPLRSLSIPKAESETELQEANDVGEARIHDYISNLQFRI 450
            LPLTAL++Q H+GISN APAD PL+ L+IPK  S TEL+  ND  E RIHDYISNL+F I
Sbjct: 506  LPLTALVIQHHQGISNAAPADTPLQPLTIPKVHS-TELEATNDAVEPRIHDYISNLKFCI 564

Query: 451  SPTAFFQVNTLAAEKLYSLAGDWAGLGPDTLLFDICCGTGTIGLTLAHRVGTVVGIAMNA 630
            SPTAFFQVNTLAAEKLYSLAGDWA LGPDTLLFDICCGTGTIGLTLAHRVG VVGI MNA
Sbjct: 565  SPTAFFQVNTLAAEKLYSLAGDWAELGPDTLLFDICCGTGTIGLTLAHRVGMVVGIEMNA 624

Query: 631  SAVSDAIRNAEINGIKNCRFVYSKAEDVMGSLLKEYLNLPQKQDEIPNSSDTNDEEVTAT 810
            SAVSDA RNAEINGI NC+F+ +KAEDV+GSLLKEYL   +K++E    S+ ND   +A+
Sbjct: 625  SAVSDAQRNAEINGINNCKFICAKAEDVIGSLLKEYLKGTKKEEENVCHSNGNDGTSSAS 684

Query: 811  D 813
            +
Sbjct: 685  N 685


Top