BLASTX nr result

ID: Panax21_contig00019498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019498
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an...   176   2e-42
gb|AFK36810.1| unknown [Lotus japonicus]                              169   2e-40
ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycin...   169   2e-40
gb|AFK35687.1| unknown [Medicago truncatula]                          169   3e-40
ref|XP_003555110.1| PREDICTED: DNA-directed RNA polymerases I an...   168   5e-40

>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
           unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  176 bits (446), Expect = 2e-42
 Identities = 83/105 (79%), Positives = 93/105 (88%)
 Frame = +1

Query: 52  MEHGSAQDQSASTFSLTDEDHTLANSLRFTLNQDPRVTFCGYSIPHPSDARVNIRVQTTG 231
           MEHGS  D S STFSL+DEDHTLANS+RFTLNQDPRV FCGYSIPHPSDARVNIRVQTTG
Sbjct: 1   MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG 60

Query: 232 DPASEVLKDSCQDLMLMCQHVRSTFDRAVLDFKNEQAINAMNIEQ 366
           D A EVLKD+CQDLMLMCQHVRSTFD+AV+D+K  + +  M+IE+
Sbjct: 61  DSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKMSKPVKDMSIEK 105


>gb|AFK36810.1| unknown [Lotus japonicus]
          Length = 104

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/104 (75%), Positives = 91/104 (87%)
 Frame = +1

Query: 52  MEHGSAQDQSASTFSLTDEDHTLANSLRFTLNQDPRVTFCGYSIPHPSDARVNIRVQTTG 231
           MEHGS  D+S STFSLTDEDHT AN++R+TLNQDPRVTFCGYSIPHPSD RVNIRVQTTG
Sbjct: 1   MEHGSHSDESRSTFSLTDEDHTFANAIRYTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 232 DPASEVLKDSCQDLMLMCQHVRSTFDRAVLDFKNEQAINAMNIE 363
           +PA EVLKDSCQ +MLMCQHVR TFD+AV DFK+++    M+I+
Sbjct: 61  EPAREVLKDSCQHMMLMCQHVRGTFDKAVNDFKSKKGGKDMDID 104


>ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycine max]
           gi|255630968|gb|ACU15848.1| unknown [Glycine max]
          Length = 107

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/97 (82%), Positives = 87/97 (89%)
 Frame = +1

Query: 52  MEHGSAQDQSASTFSLTDEDHTLANSLRFTLNQDPRVTFCGYSIPHPSDARVNIRVQTTG 231
           MEHGS  DQS STFSL DEDHT AN++RFTLNQDPRV+FCGYSIPHPSD RVNIRVQTTG
Sbjct: 1   MEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTTG 60

Query: 232 DPASEVLKDSCQDLMLMCQHVRSTFDRAVLDFKNEQA 342
           DP+ EVLKD+CQDLMLMCQHVRSTFD+AV DFK  +A
Sbjct: 61  DPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKA 97


>gb|AFK35687.1| unknown [Medicago truncatula]
          Length = 115

 Score =  169 bits (427), Expect = 3e-40
 Identities = 79/100 (79%), Positives = 87/100 (87%)
 Frame = +1

Query: 52  MEHGSAQDQSASTFSLTDEDHTLANSLRFTLNQDPRVTFCGYSIPHPSDARVNIRVQTTG 231
           MEHGS  D S STFSL DEDHT ANS+RFTLNQDPRVTFCGYSIPHPS+ RVN+RVQTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60

Query: 232 DPASEVLKDSCQDLMLMCQHVRSTFDRAVLDFKNEQAINA 351
           DPASEVLKD CQDLMLMCQHVRSTF +AV DFK  +++ +
Sbjct: 61  DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVRS 100


>ref|XP_003555110.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Glycine max]
          Length = 106

 Score =  168 bits (425), Expect = 5e-40
 Identities = 81/96 (84%), Positives = 83/96 (86%)
 Frame = +1

Query: 52  MEHGSAQDQSASTFSLTDEDHTLANSLRFTLNQDPRVTFCGYSIPHPSDARVNIRVQTTG 231
           ME GS  DQS STFSL DEDHT ANS+RFTLNQDPRVTFCGYSIPHPSD RVNIRVQTTG
Sbjct: 1   MELGSYSDQSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 232 DPASEVLKDSCQDLMLMCQHVRSTFDRAVLDFKNEQ 339
           DPA EVLKD CQDLMLMCQHVRSTFD A+ DFK  Q
Sbjct: 61  DPAREVLKDGCQDLMLMCQHVRSTFDNAMTDFKRTQ 96


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