BLASTX nr result

ID: Panax21_contig00019491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019491
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro...   271   9e-71
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]      266   5e-69
emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]   263   3e-68
ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro...   263   4e-68
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com...   254   1e-65

>ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
           [Cucumis sativus] gi|449441698|ref|XP_004138619.1|
           PREDICTED: 50S ribosomal protein L27, chloroplastic-like
           isoform 2 [Cucumis sativus]
           gi|449518795|ref|XP_004166421.1| PREDICTED: 50S
           ribosomal protein L27, chloroplastic-like isoform 1
           [Cucumis sativus] gi|449518797|ref|XP_004166422.1|
           PREDICTED: 50S ribosomal protein L27, chloroplastic-like
           isoform 2 [Cucumis sativus]
          Length = 183

 Score =  271 bits (694), Expect = 9e-71
 Identities = 133/160 (83%), Positives = 145/160 (90%)
 Frame = -3

Query: 693 FKGDFGSIHVGHKVSVSFPLQCPLTIESAHKKGAGSTKNGRDSAGRRLGVKIYGDQVAKP 514
           FKGDFGSIH   K+SVSFP   PLTIE+AHKKGAGSTKNGRDS G+RLGVKI+GDQVAKP
Sbjct: 21  FKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKP 80

Query: 513 GAIIIRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPRVVQPENPNS 334
           G+II+RQRGTKFH GKNVGLGKDHTIFSLIDGLVKFEK+GPD+K+VSVYPR VQPENPNS
Sbjct: 81  GSIIVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNS 140

Query: 333 YRARKRESFRLQRERRKARKEGIVAQPQLILASAIDTTEN 214
           YRARKRE FRLQRER+KARKEGI+AQPQL+LAS  D   N
Sbjct: 141 YRARKREYFRLQRERKKARKEGIIAQPQLLLASTDDVETN 180


>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 197

 Score =  266 bits (679), Expect = 5e-69
 Identities = 133/186 (71%), Positives = 149/186 (80%), Gaps = 6/186 (3%)
 Frame = -3

Query: 741 GAFKXXXXXXXXXXSCFKGDFGSIHVGHKVSVSFPLQCP------LTIESAHKKGAGSTK 580
           G+FK          S FKGD GS+  G K S   P + P      LTI+ AHKKGAGSTK
Sbjct: 12  GSFKGLSLSSSSSSSFFKGDAGSLKFGLKSSALLPFKAPVKAPLPLTIQMAHKKGAGSTK 71

Query: 579 NGRDSAGRRLGVKIYGDQVAKPGAIIIRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEK 400
           NGRDS G+RLGVKIYGDQ AKPGAII+RQRGTKFHPGKNVG+GKDHTIFSLIDGLVKFEK
Sbjct: 72  NGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKFHPGKNVGIGKDHTIFSLIDGLVKFEK 131

Query: 399 FGPDRKQVSVYPRVVQPENPNSYRARKRESFRLQRERRKARKEGIVAQPQLILASAIDTT 220
           FGPDRK++SVYPR +QPENPNSYRARKRE+FRLQRER+KARKEGIVAQPQL+LAS +D  
Sbjct: 132 FGPDRKKISVYPREIQPENPNSYRARKRENFRLQRERKKARKEGIVAQPQLVLASNVDAA 191

Query: 219 ENKTNC 202
           ++   C
Sbjct: 192 DSNPVC 197


>emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]
          Length = 186

 Score =  263 bits (673), Expect = 3e-68
 Identities = 131/164 (79%), Positives = 145/164 (88%), Gaps = 1/164 (0%)
 Frame = -3

Query: 690 KGDFGSIHVGHKVSVSFPLQC-PLTIESAHKKGAGSTKNGRDSAGRRLGVKIYGDQVAKP 514
           +GD GSI    K+ VSFPL+  PLTIESAHKKGAGSTKNGRDS G+RLGVKIYGDQVAKP
Sbjct: 23  RGDLGSITGSSKLCVSFPLKSLPLTIESAHKKGAGSTKNGRDSRGQRLGVKIYGDQVAKP 82

Query: 513 GAIIIRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPRVVQPENPNS 334
           GAII+RQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK++SVYP V+QPENPNS
Sbjct: 83  GAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKISVYPXVLQPENPNS 142

Query: 333 YRARKRESFRLQRERRKARKEGIVAQPQLILASAIDTTENKTNC 202
            RA+KRE FR+QRER+KARKEGIV QPQL+LASA + T+    C
Sbjct: 143 CRAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDGNPIC 186


>ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis
           vinifera] gi|296082339|emb|CBI21344.3| unnamed protein
           product [Vitis vinifera]
          Length = 186

 Score =  263 bits (671), Expect = 4e-68
 Identities = 131/164 (79%), Positives = 145/164 (88%), Gaps = 1/164 (0%)
 Frame = -3

Query: 690 KGDFGSIHVGHKVSVSFPLQC-PLTIESAHKKGAGSTKNGRDSAGRRLGVKIYGDQVAKP 514
           +GD GSI    K+ VSFPL+  PLTIESAHKKGAGSTKNGRDS G+RLGVKIYGDQVAKP
Sbjct: 23  RGDLGSITGSSKLCVSFPLKSLPLTIESAHKKGAGSTKNGRDSRGQRLGVKIYGDQVAKP 82

Query: 513 GAIIIRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPRVVQPENPNS 334
           GAII+RQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK++SVYP V+QPENPNS
Sbjct: 83  GAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKISVYPCVLQPENPNS 142

Query: 333 YRARKRESFRLQRERRKARKEGIVAQPQLILASAIDTTENKTNC 202
            RA+KRE FR+QRER+KARKEGIV QPQL+LASA + T+    C
Sbjct: 143 CRAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDGNPIC 186


>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
           gi|223549405|gb|EEF50893.1| ribosomal protein L27,
           putative [Ricinus communis]
          Length = 195

 Score =  254 bits (650), Expect = 1e-65
 Identities = 127/166 (76%), Positives = 143/166 (86%), Gaps = 2/166 (1%)
 Frame = -3

Query: 693 FKGDFGSIHVGHKVSVSFPLQCP--LTIESAHKKGAGSTKNGRDSAGRRLGVKIYGDQVA 520
           FKGD        +  VS PL+ P  LTIE AHKKGAGSTKNGRDS G+RLGVKI+G+Q A
Sbjct: 30  FKGDTTLNLSLSRNCVSLPLKAPFPLTIEMAHKKGAGSTKNGRDSPGQRLGVKIFGNQAA 89

Query: 519 KPGAIIIRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPRVVQPENP 340
           KPGAII+RQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK+VSVYPR VQPENP
Sbjct: 90  KPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKVSVYPREVQPENP 149

Query: 339 NSYRARKRESFRLQRERRKARKEGIVAQPQLILASAIDTTENKTNC 202
           NSYRARKRE FRLQRER+KARKEG++A+PQL+LAS +D T++  +C
Sbjct: 150 NSYRARKREYFRLQRERKKARKEGLIAEPQLVLASNVDATDDNPDC 195


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