BLASTX nr result

ID: Panax21_contig00019490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019490
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro...   261   2e-67
emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]   260   3e-67
ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro...   259   5e-67
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com...   255   9e-66
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]      254   2e-65

>ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
           [Cucumis sativus] gi|449441698|ref|XP_004138619.1|
           PREDICTED: 50S ribosomal protein L27, chloroplastic-like
           isoform 2 [Cucumis sativus]
           gi|449518795|ref|XP_004166421.1| PREDICTED: 50S
           ribosomal protein L27, chloroplastic-like isoform 1
           [Cucumis sativus] gi|449518797|ref|XP_004166422.1|
           PREDICTED: 50S ribosomal protein L27, chloroplastic-like
           isoform 2 [Cucumis sativus]
          Length = 183

 Score =  261 bits (666), Expect = 2e-67
 Identities = 130/157 (82%), Positives = 142/157 (90%)
 Frame = +2

Query: 107 IHVGHKVSVSFPLKSPLTIESAHKKGAGSTKNGRDSAGKRLGVKIYGDQVAKPGAIIVRQ 286
           IH   K+SVSFP   PLTIE+AHKKGAGSTKNGRDS G+RLGVKI+GDQVAKPG+IIVRQ
Sbjct: 28  IHTSPKLSVSFPNIFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSIIVRQ 87

Query: 287 RGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPRVVQPENPNSYRARKRE 466
           RGTKFH GKNVGLGKDHTIFSLIDGLVKFEK+GPD+K+VSVYPR VQPENPNSYRARKRE
Sbjct: 88  RGTKFHAGKNVGLGKDHTIFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKRE 147

Query: 467 SFRLQRERRKARKEGIVSQPQLLLASVTDNTENKPNC 577
            FRLQRER+KARKEGI++QPQLLLAS TD+ E  P C
Sbjct: 148 YFRLQRERKKARKEGIIAQPQLLLAS-TDDVETNPVC 183


>emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]
          Length = 186

 Score =  260 bits (664), Expect = 3e-67
 Identities = 129/153 (84%), Positives = 140/153 (91%), Gaps = 1/153 (0%)
 Frame = +2

Query: 122 KVSVSFPLKS-PLTIESAHKKGAGSTKNGRDSAGKRLGVKIYGDQVAKPGAIIVRQRGTK 298
           K+ VSFPLKS PLTIESAHKKGAGSTKNGRDS G+RLGVKIYGDQVAKPGAIIVRQRGTK
Sbjct: 34  KLCVSFPLKSLPLTIESAHKKGAGSTKNGRDSRGQRLGVKIYGDQVAKPGAIIVRQRGTK 93

Query: 299 FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPRVVQPENPNSYRARKRESFRL 478
           FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK++SVYP V+QPENPNS RA+KRE FR+
Sbjct: 94  FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKISVYPXVLQPENPNSCRAKKREYFRM 153

Query: 479 QRERRKARKEGIVSQPQLLLASVTDNTENKPNC 577
           QRER+KARKEGIV QPQL+LAS  + T+  P C
Sbjct: 154 QRERKKARKEGIVPQPQLVLASANEATDGNPIC 186


>ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis
           vinifera] gi|296082339|emb|CBI21344.3| unnamed protein
           product [Vitis vinifera]
          Length = 186

 Score =  259 bits (662), Expect = 5e-67
 Identities = 129/153 (84%), Positives = 140/153 (91%), Gaps = 1/153 (0%)
 Frame = +2

Query: 122 KVSVSFPLKS-PLTIESAHKKGAGSTKNGRDSAGKRLGVKIYGDQVAKPGAIIVRQRGTK 298
           K+ VSFPLKS PLTIESAHKKGAGSTKNGRDS G+RLGVKIYGDQVAKPGAIIVRQRGTK
Sbjct: 34  KLCVSFPLKSLPLTIESAHKKGAGSTKNGRDSRGQRLGVKIYGDQVAKPGAIIVRQRGTK 93

Query: 299 FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPRVVQPENPNSYRARKRESFRL 478
           FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK++SVYP V+QPENPNS RA+KRE FR+
Sbjct: 94  FHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKISVYPCVLQPENPNSCRAKKREYFRM 153

Query: 479 QRERRKARKEGIVSQPQLLLASVTDNTENKPNC 577
           QRER+KARKEGIV QPQL+LAS  + T+  P C
Sbjct: 154 QRERKKARKEGIVPQPQLVLASANEATDGNPIC 186


>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
           gi|223549405|gb|EEF50893.1| ribosomal protein L27,
           putative [Ricinus communis]
          Length = 195

 Score =  255 bits (651), Expect = 9e-66
 Identities = 125/151 (82%), Positives = 139/151 (92%), Gaps = 2/151 (1%)
 Frame = +2

Query: 131 VSFPLKSP--LTIESAHKKGAGSTKNGRDSAGKRLGVKIYGDQVAKPGAIIVRQRGTKFH 304
           VS PLK+P  LTIE AHKKGAGSTKNGRDS G+RLGVKI+G+Q AKPGAIIVRQRGTKFH
Sbjct: 45  VSLPLKAPFPLTIEMAHKKGAGSTKNGRDSPGQRLGVKIFGNQAAKPGAIIVRQRGTKFH 104

Query: 305 PGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPRVVQPENPNSYRARKRESFRLQR 484
           PGKNVGLGKDHTIFSLIDGLVKFEKFGPDRK+VSVYPR VQPENPNSYRARKRE FRLQR
Sbjct: 105 PGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKKVSVYPREVQPENPNSYRARKREYFRLQR 164

Query: 485 ERRKARKEGIVSQPQLLLASVTDNTENKPNC 577
           ER+KARKEG++++PQL+LAS  D T++ P+C
Sbjct: 165 ERKKARKEGLIAEPQLVLASNVDATDDNPDC 195


>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 197

 Score =  254 bits (649), Expect = 2e-65
 Identities = 125/152 (82%), Positives = 136/152 (89%)
 Frame = +2

Query: 122 KVSVSFPLKSPLTIESAHKKGAGSTKNGRDSAGKRLGVKIYGDQVAKPGAIIVRQRGTKF 301
           K  V  PL  PLTI+ AHKKGAGSTKNGRDS GKRLGVKIYGDQ AKPGAIIVRQRGTKF
Sbjct: 48  KAPVKAPL--PLTIQMAHKKGAGSTKNGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKF 105

Query: 302 HPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPRVVQPENPNSYRARKRESFRLQ 481
           HPGKNVG+GKDHTIFSLIDGLVKFEKFGPDRK++SVYPR +QPENPNSYRARKRE+FRLQ
Sbjct: 106 HPGKNVGIGKDHTIFSLIDGLVKFEKFGPDRKKISVYPREIQPENPNSYRARKRENFRLQ 165

Query: 482 RERRKARKEGIVSQPQLLLASVTDNTENKPNC 577
           RER+KARKEGIV+QPQL+LAS  D  ++ P C
Sbjct: 166 RERKKARKEGIVAQPQLVLASNVDAADSNPVC 197


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