BLASTX nr result

ID: Panax21_contig00019463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019463
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   182   2e-44
ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   182   2e-44
ref|XP_004147040.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   178   5e-43
ref|XP_002530820.1| hect ubiquitin-protein ligase, putative [Ric...   174   5e-42
emb|CBI37879.3| unnamed protein product [Vitis vinifera]              173   1e-41

>ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 2 [Vitis
            vinifera]
          Length = 1814

 Score =  182 bits (463), Expect = 2e-44
 Identities = 98/138 (71%), Positives = 111/138 (80%), Gaps = 3/138 (2%)
 Frame = +1

Query: 1    MEGDIVELKDGKM--ISNTSMASRDLIQAPLGLFPQPWPLGTDVSDSSQLNKVIEYFRLL 174
            ME D  ELK+GK   IS  S A+ D++QAPLGLFP+PWP   D SD SQ +KVIE+FRL+
Sbjct: 1463 MEIDGDELKNGKTDNISRLSPAASDIVQAPLGLFPRPWPPNADASDGSQFSKVIEHFRLV 1522

Query: 175  GRVMAKALQDGRLLDLPLSTAFYKLVLGQELDLHDILSFDTEFGKTLLELQALVCRKQYL 354
            GRV+AKALQDGRLLDLPLSTA YKLVLGQELDLHDILSFD +FGK L ELQ LV RKQYL
Sbjct: 1523 GRVIAKALQDGRLLDLPLSTALYKLVLGQELDLHDILSFDADFGKILQELQVLVSRKQYL 1582

Query: 355  ESMGGQDHEAI-DLRFRG 405
            ES GG + +AI +L FRG
Sbjct: 1583 ESTGGDNQDAIANLCFRG 1600


>ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 1 [Vitis
            vinifera]
          Length = 1896

 Score =  182 bits (463), Expect = 2e-44
 Identities = 98/138 (71%), Positives = 111/138 (80%), Gaps = 3/138 (2%)
 Frame = +1

Query: 1    MEGDIVELKDGKM--ISNTSMASRDLIQAPLGLFPQPWPLGTDVSDSSQLNKVIEYFRLL 174
            ME D  ELK+GK   IS  S A+ D++QAPLGLFP+PWP   D SD SQ +KVIE+FRL+
Sbjct: 1542 MEIDGDELKNGKTDNISRLSPAASDIVQAPLGLFPRPWPPNADASDGSQFSKVIEHFRLV 1601

Query: 175  GRVMAKALQDGRLLDLPLSTAFYKLVLGQELDLHDILSFDTEFGKTLLELQALVCRKQYL 354
            GRV+AKALQDGRLLDLPLSTA YKLVLGQELDLHDILSFD +FGK L ELQ LV RKQYL
Sbjct: 1602 GRVIAKALQDGRLLDLPLSTALYKLVLGQELDLHDILSFDADFGKILQELQVLVSRKQYL 1661

Query: 355  ESMGGQDHEAI-DLRFRG 405
            ES GG + +AI +L FRG
Sbjct: 1662 ESTGGDNQDAIANLCFRG 1679


>ref|XP_004147040.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Cucumis sativus]
            gi|449489652|ref|XP_004158376.1| PREDICTED: E3
            ubiquitin-protein ligase UPL3-like [Cucumis sativus]
          Length = 1892

 Score =  178 bits (451), Expect = 5e-43
 Identities = 92/135 (68%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
 Frame = +1

Query: 4    EGDIVELKDGKMISNTSMASRDLIQAPLGLFPQPWPLGTDVSDSSQLNKVIEYFRLLGRV 183
            +G   + K G  +++ + A+ D+IQ+PLGLFP+PWP   D SD SQ +KVIEYFRL+GRV
Sbjct: 1543 DGQARKPKGGSRLTSDA-ANIDIIQSPLGLFPRPWPANADSSDGSQFSKVIEYFRLVGRV 1601

Query: 184  MAKALQDGRLLDLPLSTAFYKLVLGQELDLHDILSFDTEFGKTLLELQALVCRKQYLESM 363
            MAKALQDGRLLDLPLSTAFYKLVLGQ+LDLHDILSFD E GKTL ELQALVCRKQYL S+
Sbjct: 1602 MAKALQDGRLLDLPLSTAFYKLVLGQDLDLHDILSFDAELGKTLQELQALVCRKQYLGSL 1661

Query: 364  GGQDHEAI-DLRFRG 405
             G +   I +L FRG
Sbjct: 1662 NGDNQNTISNLTFRG 1676


>ref|XP_002530820.1| hect ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223529612|gb|EEF31560.1| hect ubiquitin-protein
            ligase, putative [Ricinus communis]
          Length = 1899

 Score =  174 bits (442), Expect = 5e-42
 Identities = 91/136 (66%), Positives = 106/136 (77%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1    MEGDIVELKDGKMISNTSMASRDLIQAPLGLFPQPWPLGTDVSDSSQLNKVIEYFRLLGR 180
            ME D    K+GK+ + +     D++QAPLGLFP+PWP   D S+ SQ  K +EYFRL+GR
Sbjct: 1547 MEIDEDGNKNGKVNNCSDAMGADVVQAPLGLFPRPWPPSADASEGSQFYKAVEYFRLVGR 1606

Query: 181  VMAKALQDGRLLDLPLSTAFYKLVLGQELDLHDILSFDTEFGKTLLELQALVCRKQYLES 360
            VMAKALQDGRLLDLPLSTAFYKLVL QELDL+DILSFD EFGK L EL ALVCRK++LES
Sbjct: 1607 VMAKALQDGRLLDLPLSTAFYKLVLNQELDLYDILSFDAEFGKVLQELHALVCRKRFLES 1666

Query: 361  MGGQDHEAI-DLRFRG 405
             G  + +AI DLRFRG
Sbjct: 1667 SGTDNLDAISDLRFRG 1682


>emb|CBI37879.3| unnamed protein product [Vitis vinifera]
          Length = 1352

 Score =  173 bits (439), Expect = 1e-41
 Identities = 88/119 (73%), Positives = 100/119 (84%), Gaps = 1/119 (0%)
 Frame = +1

Query: 52   SMASRDLIQAPLGLFPQPWPLGTDVSDSSQLNKVIEYFRLLGRVMAKALQDGRLLDLPLS 231
            S A+ D++QAPLGLFP+PWP   D SD SQ +KVIE+FRL+GRV+AKALQDGRLLDLPLS
Sbjct: 1017 SPAASDIVQAPLGLFPRPWPPNADASDGSQFSKVIEHFRLVGRVIAKALQDGRLLDLPLS 1076

Query: 232  TAFYKLVLGQELDLHDILSFDTEFGKTLLELQALVCRKQYLESMGGQDHEAI-DLRFRG 405
            TA YKLVLGQELDLHDILSFD +FGK L ELQ LV RKQYLES GG + +AI +L FRG
Sbjct: 1077 TALYKLVLGQELDLHDILSFDADFGKILQELQVLVSRKQYLESTGGDNQDAIANLCFRG 1135


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