BLASTX nr result

ID: Panax21_contig00019461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019461
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266415.1| PREDICTED: scarecrow-like protein 1 [Vitis v...   152   3e-35
ref|XP_002520249.1| Chitin-inducible gibberellin-responsive prot...   144   1e-32
ref|XP_002302201.1| GRAS family transcription factor [Populus tr...   140   1e-31
ref|XP_002306674.1| GRAS family transcription factor [Populus tr...   135   3e-30
gb|ADL36813.1| SCL domain class transcription factor [Malus x do...   130   9e-29

>ref|XP_002266415.1| PREDICTED: scarecrow-like protein 1 [Vitis vinifera]
          Length = 565

 Score =  152 bits (384), Expect = 3e-35
 Identities = 84/146 (57%), Positives = 101/146 (69%)
 Frame = +3

Query: 6   IMYATESYGTESYDPKYFLDSPTDELIRQSTSCFAKNPFHAQGAASYQLMAVQDTFDSYM 185
           I+Y TESY  ES DPKY +DSPT+ELI   +S  +  PFH QG ASYQL+A     DS  
Sbjct: 43  IVYMTESYCGESNDPKYLVDSPTEELIHPPSSGISGRPFHPQGTASYQLIA-----DSVS 97

Query: 186 SMRDSDAYEANFDLDYLGSHSPEAIDLDDDKMRLKLQELERVLLDGNDEDDDSVIGPDRS 365
           SM    ++   F+ DYL   SP+ I+ ++DKMRLKLQELER LLD ND+DD      D+S
Sbjct: 98  SMTPEGSF---FESDYLECESPDQINYNEDKMRLKLQELERALLDDNDDDD------DQS 148

Query: 366 MEIDNEWSDPIHNVLLHDSPKESSSS 443
           MEID +W+DPI N LLHDSPKESSSS
Sbjct: 149 MEIDADWADPIGNELLHDSPKESSSS 174


>ref|XP_002520249.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus
           communis] gi|223540468|gb|EEF42035.1| Chitin-inducible
           gibberellin-responsive protein, putative [Ricinus
           communis]
          Length = 559

 Score =  144 bits (362), Expect = 1e-32
 Identities = 78/148 (52%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
 Frame = +3

Query: 3   KIMYATESYGTESYDPKYFLDSPTDELIRQSTSCFAKNPFHAQGAASYQLMAVQDTFDSY 182
           K +Y TESY +ESY+ KYF+DSPTDELI+ S+S  + N FH Q A+SYQL          
Sbjct: 42  KTIYMTESYSSESYE-KYFIDSPTDELIQLSSSSISGNSFHLQDASSYQLRT-------- 92

Query: 183 MSMRDSDAYEANFDLDYLGSHSPEAIDLDDDKMRLKLQELERVLLDGNDEDDDS-VIGPD 359
                        + DY+   SP+ +D D D+MRLKLQELER LLD N++DDD+ + G  
Sbjct: 93  -------------ESDYVEFQSPDLVDYDADEMRLKLQELERALLDDNEDDDDNDMFGNS 139

Query: 360 RSMEIDNEWSDPIHNVLLHDSPKESSSS 443
            SMEID EW +PI NV+LHDSPKESSSS
Sbjct: 140 HSMEIDGEWCEPIQNVMLHDSPKESSSS 167


>ref|XP_002302201.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222843927|gb|EEE81474.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 585

 Score =  140 bits (352), Expect = 1e-31
 Identities = 79/154 (51%), Positives = 104/154 (67%), Gaps = 9/154 (5%)
 Frame = +3

Query: 9   MYATESYGTESYDPKYFLDSPTDELIRQSTSCFAKNPFHAQGAASYQL-------MAVQD 167
           MY T+SY +ESY+ KYFLDSPT+ELI+ S+S  + N    QG +SYQL       M+ QD
Sbjct: 44  MYMTDSYSSESYE-KYFLDSPTEELIQPSSSGISGNSAPPQGTSSYQLRKNLGPSMSPQD 102

Query: 168 T-FDSYMSMRDS-DAYEANFDLDYLGSHSPEAIDLDDDKMRLKLQELERVLLDGNDEDDD 341
             +D+  ++    D Y+ N + DYL   SP+ ++ D+ KM+LK QELER LL  ND D+D
Sbjct: 103 DPYDACFTLTTPCDGYQFNSESDYLDIESPDPLNYDEYKMKLKFQELERALL--NDNDED 160

Query: 342 SVIGPDRSMEIDNEWSDPIHNVLLHDSPKESSSS 443
            + G  +SME+D EWSDPI N +LHDSPKESSSS
Sbjct: 161 GMFGNSQSMEMDGEWSDPIQNGMLHDSPKESSSS 194


>ref|XP_002306674.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222856123|gb|EEE93670.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 584

 Score =  135 bits (341), Expect = 3e-30
 Identities = 77/153 (50%), Positives = 101/153 (66%), Gaps = 8/153 (5%)
 Frame = +3

Query: 9   MYATESYGTESYDPKYFLDSPTDELIRQSTSCFAKNPFHAQGAASYQ-------LMAVQD 167
           MY T+SY  ESY+ K+FLDSPT+E+I+ S+S  + N  H QGA+SYQ        M  QD
Sbjct: 44  MYMTDSYSCESYE-KFFLDSPTEEIIQPSSSDISGNSAHPQGASSYQPRKSSGSTMFPQD 102

Query: 168 TFDSYMSMRDS-DAYEANFDLDYLGSHSPEAIDLDDDKMRLKLQELERVLLDGNDEDDDS 344
            +++  ++    D Y    + DYL   SP  +D D+ KM+LKLQELER LL+ N+ED   
Sbjct: 103 PYNASFNLTTPCDGYPFISESDYLDIESPYQLDYDEYKMKLKLQELERALLEDNEED--G 160

Query: 345 VIGPDRSMEIDNEWSDPIHNVLLHDSPKESSSS 443
           + G  +SME+D EWSDPI N +LHDSPKESSSS
Sbjct: 161 MFGNSQSMEMDVEWSDPIQNGMLHDSPKESSSS 193


>gb|ADL36813.1| SCL domain class transcription factor [Malus x domestica]
          Length = 579

 Score =  130 bits (328), Expect = 9e-29
 Identities = 76/155 (49%), Positives = 100/155 (64%), Gaps = 8/155 (5%)
 Frame = +3

Query: 3   KIMYATESYGTESYDPKYFLDSPTDELIRQSTSCFAKNPFHAQGAASYQLMAVQDTFDSY 182
           K +Y  +SY +E+Y+ KYFLDSP +E+   S+S  + +  + +GA+ YQL A      S 
Sbjct: 42  KAVYVNDSYSSETYE-KYFLDSPMEEVTHPSSSGISGSSTNPRGASYYQLTA-----GSV 95

Query: 183 MSMRDSDAY----EANFDLDYLGSHSPEAIDLDDDKMRLKLQELERVLLDGNDEDDDSVI 350
            S+   + Y     +NF+ DYL S SP+A   D+DKMRLKLQELER LLD ND+D+D   
Sbjct: 96  SSLNTQNPYITSLMSNFESDYLESQSPDADSFDEDKMRLKLQELERALLDDNDDDEDD-- 153

Query: 351 GP----DRSMEIDNEWSDPIHNVLLHDSPKESSSS 443
           G      RSME++ EW DPI + LLHDSPKESSSS
Sbjct: 154 GEKNCCSRSMEVEGEWIDPIQSELLHDSPKESSSS 188


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