BLASTX nr result

ID: Panax21_contig00019452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019452
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japo...    84   5e-16
ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group] g...    84   5e-16
ref|NP_001173110.1| Os02g0670700 [Oryza sativa Japonica Group] g...    88   4e-15
gb|EEE57549.1| hypothetical protein OsJ_07882 [Oryza sativa Japo...    88   4e-15
tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea m...    86   1e-14

>gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japonica Group]
          Length = 920

 Score = 84.0 bits (206), Expect(2) = 5e-16
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = +2

Query: 347 KCCNKLGDLELGSAIHIDAIKFGLDTDPFVGSSLIGLYCRYGGVEDAYKVFDEIIEKDLV 526
           K C +L +L LG  +H D++K  L  + FVGSSLIGLY ++    D+  VF+EII KD+V
Sbjct: 154 KSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIV 213

Query: 527 AYTSMITGYSQIGD 568
           AYTSMITGYS+  D
Sbjct: 214 AYTSMITGYSETVD 227



 Score = 27.3 bits (59), Expect(2) = 5e-16
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 220 VWNSALVGYFRASLFDEV 273
           +WNSA+V YFRA   +EV
Sbjct: 113 LWNSAMVDYFRAGYPEEV 130


>ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
           gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|53792343|dbj|BAD53077.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113532542|dbj|BAF04925.1|
           Os01g0357800 [Oryza sativa Japonica Group]
          Length = 804

 Score = 84.0 bits (206), Expect(2) = 5e-16
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = +2

Query: 347 KCCNKLGDLELGSAIHIDAIKFGLDTDPFVGSSLIGLYCRYGGVEDAYKVFDEIIEKDLV 526
           K C +L +L LG  +H D++K  L  + FVGSSLIGLY ++    D+  VF+EII KD+V
Sbjct: 154 KSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIV 213

Query: 527 AYTSMITGYSQIGD 568
           AYTSMITGYS+  D
Sbjct: 214 AYTSMITGYSETVD 227



 Score = 27.3 bits (59), Expect(2) = 5e-16
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 220 VWNSALVGYFRASLFDEV 273
           +WNSA+V YFRA   +EV
Sbjct: 113 LWNSAMVDYFRAGYPEEV 130


>ref|NP_001173110.1| Os02g0670700 [Oryza sativa Japonica Group]
           gi|50251347|dbj|BAD28323.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|255671158|dbj|BAH91839.1| Os02g0670700 [Oryza
           sativa Japonica Group]
          Length = 687

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 42/74 (56%), Positives = 56/74 (75%)
 Frame = +2

Query: 347 KCCNKLGDLELGSAIHIDAIKFGLDTDPFVGSSLIGLYCRYGGVEDAYKVFDEIIEKDLV 526
           K C +L +L LG  +H+D++KFGL  D F+GSSLI LY +   ++D+  VF EII+KD+V
Sbjct: 37  KSCTELENLYLGKGMHVDSLKFGLSGDKFIGSSLIVLYSKLHRMDDSQGVFKEIIDKDVV 96

Query: 527 AYTSMITGYSQIGD 568
           AYTSMITGYS+I D
Sbjct: 97  AYTSMITGYSEIVD 110


>gb|EEE57549.1| hypothetical protein OsJ_07882 [Oryza sativa Japonica Group]
          Length = 668

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 42/74 (56%), Positives = 56/74 (75%)
 Frame = +2

Query: 347 KCCNKLGDLELGSAIHIDAIKFGLDTDPFVGSSLIGLYCRYGGVEDAYKVFDEIIEKDLV 526
           K C +L +L LG  +H+D++KFGL  D F+GSSLI LY +   ++D+  VF EII+KD+V
Sbjct: 37  KSCTELENLYLGKGMHVDSLKFGLSGDKFIGSSLIVLYSKLHRMDDSQGVFKEIIDKDVV 96

Query: 527 AYTSMITGYSQIGD 568
           AYTSMITGYS+I D
Sbjct: 97  AYTSMITGYSEIVD 110


>tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
          Length = 805

 Score = 85.5 bits (210), Expect(2) = 1e-14
 Identities = 38/71 (53%), Positives = 54/71 (76%)
 Frame = +2

Query: 347 KCCNKLGDLELGSAIHIDAIKFGLDTDPFVGSSLIGLYCRYGGVEDAYKVFDEIIEKDLV 526
           K C +L +L LG  +H D++K GL  D FVGSSL+GLY +   ++D+ K F+EI++KD+V
Sbjct: 152 KSCIELRNLLLGKGMHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEILDKDIV 211

Query: 527 AYTSMITGYSQ 559
           +YTSMITGYS+
Sbjct: 212 SYTSMITGYSE 222



 Score = 20.8 bits (42), Expect(2) = 1e-14
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 223 WNSALVGYFRASLFDE 270
           WNS +V  FRA   +E
Sbjct: 112 WNSVMVDIFRAGYPEE 127


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