BLASTX nr result

ID: Panax21_contig00019435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019435
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]    72   2e-10
ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g...    65   1e-08
ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g...    64   3e-08
ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleop...    63   8e-08
ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g...    61   3e-07

>emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
          Length = 807

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = +3

Query: 3   SLIGKGGSIIRALQNETGASIKITDAAAPDSNERVVLISAREACHSNTNTNTHH 164
           SLIGKGGSIIR LQ+ETGASIKI D AAPDS+ERVV+ISAREAC + TN    H
Sbjct: 437 SLIGKGGSIIRXLQSETGASIKIAD-AAPDSDERVVVISAREAC-TLTNXEQKH 488


>ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
           gi|297735779|emb|CBI18466.3| unnamed protein product
           [Vitis vinifera]
          Length = 704

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +3

Query: 3   SLIGKGGSIIRALQNETGASIKITDAAAPDSNERVVLISARE 128
           SLIGKGGSIIR LQ+ETGASIKI D AAPDS+ERVV+ISARE
Sbjct: 341 SLIGKGGSIIRFLQSETGASIKIAD-AAPDSDERVVVISARE 381


>ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 559

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 33/42 (78%), Positives = 39/42 (92%)
 Frame = +3

Query: 3   SLIGKGGSIIRALQNETGASIKITDAAAPDSNERVVLISARE 128
           SLIGKGGS++RALQNETGASI+I + A PDS+ERVV+ISARE
Sbjct: 207 SLIGKGGSVVRALQNETGASIQIVE-AGPDSDERVVVISARE 247


>ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
           max]
          Length = 565

 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = +3

Query: 3   SLIGKGGSIIRALQNETGASIKITDAAAPDSNERVVLISARE 128
           SLIGKGGS++RALQNETGASI+I + A PDS+ERVV+ISA+E
Sbjct: 213 SLIGKGGSVVRALQNETGASIQIVE-AGPDSDERVVVISAQE 253


>ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 716

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = +3

Query: 3   SLIGKGGSIIRALQNETGASIKITDAAAPDSNERVVLISARE 128
           SLIGKGG+++RALQNETGASIKI D   PD +ER+V+ISARE
Sbjct: 357 SLIGKGGTVVRALQNETGASIKIVD--TPDLDERLVVISARE 396


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