BLASTX nr result

ID: Panax21_contig00019405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019405
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|2...    65   3e-08
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]    61   4e-07
ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06

>ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|222856525|gb|EEE94072.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 31/111 (27%)
 Frame = +1

Query: 409 ITWNAMMTAFIHNGYFRKGIELF----------RKILAKIL------------------- 501
           ++W A++  ++HN    KG+E             K+ ++ L                   
Sbjct: 198 VSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCL 257

Query: 502 --I*QKTGIGCSQVVQSSIFYMYSICGTHENSVISFCEVPNKDLLSWTSFI 648
             +  KTG+GCSQVVQSS+  MYS CG  E +  SFC+V +KD+ SWTS I
Sbjct: 258 HGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVI 308


>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 29/49 (59%), Positives = 36/49 (73%)
 Frame = +1

Query: 511 KTGIGCSQVVQSSIFYMYSICGTHENSVISFCEVPNKDLLSWTSFITKF 657
           KTG+  SQVVQSS+  MYS CG  E +  SFCEV NKD++SWTS I+ +
Sbjct: 595 KTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAY 643


>ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 28/49 (57%), Positives = 35/49 (71%)
 Frame = +1

Query: 511 KTGIGCSQVVQSSIFYMYSICGTHENSVISFCEVPNKDLLSWTSFITKF 657
           KTG+  SQVVQS +  MYS CG  E +  SFCEV NKD++SWTS I+ +
Sbjct: 266 KTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAY 314


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