BLASTX nr result
ID: Panax21_contig00019405
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00019405 (993 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|2... 65 3e-08 emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera] 61 4e-07 ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-06 >ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa] Length = 733 Score = 65.1 bits (157), Expect = 3e-08 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 31/111 (27%) Frame = +1 Query: 409 ITWNAMMTAFIHNGYFRKGIELF----------RKILAKIL------------------- 501 ++W A++ ++HN KG+E K+ ++ L Sbjct: 198 VSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCL 257 Query: 502 --I*QKTGIGCSQVVQSSIFYMYSICGTHENSVISFCEVPNKDLLSWTSFI 648 + KTG+GCSQVVQSS+ MYS CG E + SFC+V +KD+ SWTS I Sbjct: 258 HGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVI 308 >emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera] Length = 1111 Score = 61.2 bits (147), Expect = 4e-07 Identities = 29/49 (59%), Positives = 36/49 (73%) Frame = +1 Query: 511 KTGIGCSQVVQSSIFYMYSICGTHENSVISFCEVPNKDLLSWTSFITKF 657 KTG+ SQVVQSS+ MYS CG E + SFCEV NKD++SWTS I+ + Sbjct: 595 KTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAY 643 >ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Vitis vinifera] Length = 744 Score = 58.9 bits (141), Expect = 2e-06 Identities = 28/49 (57%), Positives = 35/49 (71%) Frame = +1 Query: 511 KTGIGCSQVVQSSIFYMYSICGTHENSVISFCEVPNKDLLSWTSFITKF 657 KTG+ SQVVQS + MYS CG E + SFCEV NKD++SWTS I+ + Sbjct: 266 KTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAY 314