BLASTX nr result
ID: Panax21_contig00019398
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00019398
(547 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278416.2| PREDICTED: transcription elongation factor S... 226 1e-57
emb|CBI32841.3| unnamed protein product [Vitis vinifera] 226 1e-57
ref|XP_003553378.1| PREDICTED: transcription elongation factor S... 214 5e-54
ref|XP_003521098.1| PREDICTED: transcription elongation factor S... 211 8e-53
ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis... 210 1e-52
>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis vinifera]
Length = 1660
Score = 226 bits (577), Expect = 1e-57
Identities = 119/205 (58%), Positives = 132/205 (64%), Gaps = 23/205 (11%)
Frame = -2
Query: 546 HEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKKMFEDIDRLIAYFQRHIDDP-HDPAPS 370
HEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRK+MFEDIDRL+AYFQRHIDDP H+ APS
Sbjct: 1381 HEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLHESAPS 1440
Query: 369 VRSVAAMVPMCSPAT------XXXXXXXXXXXXXXXXXXGQSTDR--------KTGRGDY 232
+RSVAAMVPM SPAT GQS+DR +TGR DY
Sbjct: 1441 IRSVAAMVPMRSPATGGSSGASVGSGWGGSANSSEGGWRGQSSDRDRSSTPGSRTGRNDY 1500
Query: 231 RNGGSEDGHPSGLPRPYXXXXXXXXXXXXXXXXXXXXXXSESDYGTKK--------DNGW 76
RNGG DGHPSGLPRPY +S YGT K ++GW
Sbjct: 1501 RNGGGRDGHPSGLPRPYGGRGRGRGSYGSNRGYGANNERQDSGYGTPKWDSGSKDGEDGW 1560
Query: 75 SSFPGARVQNSPGREAFPGGWGGGG 1
+SFPGA+VQNSPG+E+FPG WG GG
Sbjct: 1561 NSFPGAKVQNSPGKESFPGSWGAGG 1585
>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
Length = 1646
Score = 226 bits (577), Expect = 1e-57
Identities = 119/205 (58%), Positives = 132/205 (64%), Gaps = 23/205 (11%)
Frame = -2
Query: 546 HEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKKMFEDIDRLIAYFQRHIDDP-HDPAPS 370
HEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRK+MFEDIDRL+AYFQRHIDDP H+ APS
Sbjct: 1367 HEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLHESAPS 1426
Query: 369 VRSVAAMVPMCSPAT------XXXXXXXXXXXXXXXXXXGQSTDR--------KTGRGDY 232
+RSVAAMVPM SPAT GQS+DR +TGR DY
Sbjct: 1427 IRSVAAMVPMRSPATGGSSGASVGSGWGGSANSSEGGWRGQSSDRDRSSTPGSRTGRNDY 1486
Query: 231 RNGGSEDGHPSGLPRPYXXXXXXXXXXXXXXXXXXXXXXSESDYGTKK--------DNGW 76
RNGG DGHPSGLPRPY +S YGT K ++GW
Sbjct: 1487 RNGGGRDGHPSGLPRPYGGRGRGRGSYGSNRGYGANNERQDSGYGTPKWDSGSKDGEDGW 1546
Query: 75 SSFPGARVQNSPGREAFPGGWGGGG 1
+SFPGA+VQNSPG+E+FPG WG GG
Sbjct: 1547 NSFPGAKVQNSPGKESFPGSWGAGG 1571
>ref|XP_003553378.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
Length = 1617
Score = 214 bits (546), Expect = 5e-54
Identities = 117/207 (56%), Positives = 130/207 (62%), Gaps = 25/207 (12%)
Frame = -2
Query: 546 HEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKKMFEDIDRLIAYFQRHIDDP-HDPAPS 370
HEHPGTFILTYIRS+NPHHEY+GLYPKGF+FRKKMFEDIDRL+AYFQRHIDDP HD APS
Sbjct: 1356 HEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDSAPS 1415
Query: 369 VRSVAAMVPMCSPAT-----XXXXXXXXXXXXXXXXXXGQSTDR---------KTGRGDY 232
+RSV+AMVPM SPAT G S DR KTGRG+Y
Sbjct: 1416 IRSVSAMVPMRSPATGGSSGASGGSGWGGGSNSEGGWRGHSYDRGDRSSTPGSKTGRGEY 1475
Query: 231 RNGGSEDGHPSGLPRPYXXXXXXXXXXXXXXXXXXXXXXSESDYG---------TK-KDN 82
RN G++D HPSG+PRPY D G TK D+
Sbjct: 1476 RNNGNQDEHPSGVPRPYGGGRGRGRGRGSYNNRGDNSNNERQDSGYGGRWGSNNTKDSDD 1535
Query: 81 GWSSFPGARVQNSPGREAFPGGWGGGG 1
G S+FPGA+VQNSPGREAFPGGWGGGG
Sbjct: 1536 GLSNFPGAKVQNSPGREAFPGGWGGGG 1562
>ref|XP_003521098.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
Length = 1663
Score = 211 bits (536), Expect = 8e-53
Identities = 115/210 (54%), Positives = 130/210 (61%), Gaps = 28/210 (13%)
Frame = -2
Query: 546 HEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKKMFEDIDRLIAYFQRHIDDP-HDPAPS 370
HEHPGTFILTYIRS+NPHHEY+GLYPKGF+FRKKMFEDIDRL+AYFQRHIDDP HD APS
Sbjct: 1387 HEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDSAPS 1446
Query: 369 VRSVAAMVPMCSPA------TXXXXXXXXXXXXXXXXXXGQSTDR---------KTGRGD 235
+RSVAAMVPM SPA G S DR +TGRG+
Sbjct: 1447 IRSVAAMVPMRSPAAGGSSGASVGSGWGGGSNSEGGGWRGHSYDRGDRSSTPGSRTGRGE 1506
Query: 234 YRNGGSEDGHPSGLPRPY----XXXXXXXXXXXXXXXXXXXXXXSESDYGTK-------- 91
YRN G++D HPSG+PRPY +S YG +
Sbjct: 1507 YRNNGNQDEHPSGVPRPYGGGRGRGRGRGRGSYNNRGDNSNNERQDSGYGGRWGSNNTKD 1566
Query: 90 KDNGWSSFPGARVQNSPGREAFPGGWGGGG 1
D+G S+FPGA+VQNSPGREAFPGGWGGGG
Sbjct: 1567 SDDGLSNFPGAKVQNSPGREAFPGGWGGGG 1596
>ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis]
gi|223536178|gb|EEF37832.1| suppressor of ty, putative
[Ricinus communis]
Length = 1650
Score = 210 bits (534), Expect = 1e-52
Identities = 115/203 (56%), Positives = 125/203 (61%), Gaps = 21/203 (10%)
Frame = -2
Query: 546 HEHPGTFILTYIRSSNPHHEYVGLYPKGFKFRKKMFEDIDRLIAYFQRHIDDP-HDPAPS 370
HE+PGTFILTYIRS+NPHHEYVGLYPKGFKFRK+MFE+IDRL+AYFQRHIDDP HD APS
Sbjct: 1386 HEYPGTFILTYIRSTNPHHEYVGLYPKGFKFRKRMFEEIDRLVAYFQRHIDDPMHDAAPS 1445
Query: 369 VRSVAAMVPMCSPAT----XXXXXXXXXXXXXXXXXXGQSTDR--------KTGRGDYRN 226
+RSVAAMVPM SPAT QS DR +TGR DYR+
Sbjct: 1446 IRSVAAMVPMRSPATGGSSGASMGSGWGGSTNDGSWRAQSFDRDRSSGPGSRTGRNDYRS 1505
Query: 225 GGSEDGHPSGLPRPYXXXXXXXXXXXXXXXXXXXXXXSESDYGTKK--------DNGWSS 70
G + D H SGLPRPY ES Y K D GW S
Sbjct: 1506 GSNRDSHQSGLPRPY-GGRGHGRGSYNSRGNSTGNDKQESGYDNSKWDSVAKDSDAGWGS 1564
Query: 69 FPGARVQNSPGREAFPGGWGGGG 1
FPGA+VQNSPGREAFPGGWG GG
Sbjct: 1565 FPGAKVQNSPGREAFPGGWGTGG 1587