BLASTX nr result

ID: Panax21_contig00019388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019388
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314941.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-20
ref|XP_002312335.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002277394.1| PREDICTED: ubiquitin-conjugating enzyme E2 3...    93   3e-17
emb|CAN72172.1| hypothetical protein VITISV_020701 [Vitis vinifera]    92   6e-17
ref|XP_002519212.1| non-canonical ubiquitin conjugating enzyme, ...    82   7e-14

>ref|XP_002314941.1| predicted protein [Populus trichocarpa] gi|222863981|gb|EEF01112.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  103 bits (256), Expect = 3e-20
 Identities = 61/131 (46%), Positives = 78/131 (59%), Gaps = 6/131 (4%)
 Frame = +3

Query: 6   QAAEENSTNADGETQVSPQNTGLQVDGEGIPNP------EVDERIVEELHEEAPLGANPV 167
           Q +EE+  N +GE Q   Q+ G+    E +PNP      EV ER++EE+HE AP+  NP 
Sbjct: 183 QGSEEHPGNNEGEAQA--QDAGVVAAAEELPNPAVGEIQEVGERVIEEVHE-APVNVNPS 239

Query: 168 PEVMGVARQVTAGRSSEQQQQLQNPETRVQRPADDRLFTWAAVGLTXXXXXXXXXXXXXX 347
           P    V+R++ A   ++Q   LQ P TRVQ+PADDRLFTWAAVGLT              
Sbjct: 240 PTGTSVSREIPARGPTDQL--LQRPVTRVQKPADDRLFTWAAVGLTIAIVVLLLKKFMKS 297

Query: 348 SEYGAVFMDGS 380
           S YGA+FMDGS
Sbjct: 298 SGYGALFMDGS 308


>ref|XP_002312335.1| predicted protein [Populus trichocarpa] gi|222852155|gb|EEE89702.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 60/132 (45%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
 Frame = +3

Query: 3   AQAAEENSTNADGETQVSPQNTGLQVDGEGIPNP------EVDERIVEELHEEAPLGANP 164
           AQ +EE+  N+  ETQ S  +       E +PNP      EV ER+ E++HE A + ANP
Sbjct: 182 AQGSEEHPNNSVCETQESSPDAEAVTAAEDLPNPAVGEIQEVGERVFEQVHE-AHITANP 240

Query: 165 VPEVMGVARQVTAGRSSEQQQQLQNPETRVQRPADDRLFTWAAVGLTXXXXXXXXXXXXX 344
            P     +R+V A  SS+Q   LQ   TRVQ+PADDRLFTWAAVGL              
Sbjct: 241 SPAGTSASREVPAKCSSDQL--LQRQVTRVQKPADDRLFTWAAVGLAIAIVVLLLKKFMK 298

Query: 345 XSEYGAVFMDGS 380
            S YGA FMDGS
Sbjct: 299 SSGYGAFFMDGS 310


>ref|XP_002277394.1| PREDICTED: ubiquitin-conjugating enzyme E2 32 [Vitis vinifera]
           gi|296083258|emb|CBI22894.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 58/126 (46%), Positives = 69/126 (54%)
 Frame = +3

Query: 3   AQAAEENSTNADGETQVSPQNTGLQVDGEGIPNPEVDERIVEELHEEAPLGANPVPEVMG 182
           +QA EE STN +GE Q +P N       + + +P V +RIVEE   + PL ANP P    
Sbjct: 182 SQAPEEPSTNREGEGQTNPPNGSAIAAADELSDPRVADRIVEEEPPQVPLNANPSP---- 237

Query: 183 VARQVTAGRSSEQQQQLQNPETRVQRPADDRLFTWAAVGLTXXXXXXXXXXXXXXSEYGA 362
           V+RQ +A R       LQ P  RVQR ADDRL TWAAVGLT              S +GA
Sbjct: 238 VSRQASAARL------LQKPMPRVQRQADDRLLTWAAVGLTIAIMVLLLKKFLKSSGHGA 291

Query: 363 VFMDGS 380
           VFMD S
Sbjct: 292 VFMDES 297


>emb|CAN72172.1| hypothetical protein VITISV_020701 [Vitis vinifera]
          Length = 297

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 58/126 (46%), Positives = 69/126 (54%)
 Frame = +3

Query: 3   AQAAEENSTNADGETQVSPQNTGLQVDGEGIPNPEVDERIVEELHEEAPLGANPVPEVMG 182
           +QA EE STN +GE Q +P N       + + +P V +RIVEE   + PL ANP P    
Sbjct: 182 SQAPEEPSTNREGEGQTNPPNGSAIAAADELSDPRVADRIVEEEPPQVPLNANPSP---- 237

Query: 183 VARQVTAGRSSEQQQQLQNPETRVQRPADDRLFTWAAVGLTXXXXXXXXXXXXXXSEYGA 362
           V+RQ +A R       LQ P  RVQR ADDRL TWAAVGLT              S +GA
Sbjct: 238 VSRQASAVRL------LQKPVPRVQRQADDRLLTWAAVGLTIAIMVLLLKKFLKSSGHGA 291

Query: 363 VFMDGS 380
           VFMD S
Sbjct: 292 VFMDES 297


>ref|XP_002519212.1| non-canonical ubiquitin conjugating enzyme, putative [Ricinus
           communis] gi|223541527|gb|EEF43076.1| non-canonical
           ubiquitin conjugating enzyme, putative [Ricinus
           communis]
          Length = 309

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 56/131 (42%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
 Frame = +3

Query: 3   AQAAEENSTNADGETQVSPQNTGLQVDGEGIPNPEVDE------RIVEELHEEAPLGANP 164
           +Q +EE+ T  + E     Q  G       +PN  V E      RIVEE+  EAP+  NP
Sbjct: 182 SQDSEEHHTGKEDEAHAILQEQGAVA--ANLPNLAVSEQLAVGDRIVEEV-PEAPVNVNP 238

Query: 165 VPEVMGVARQVTAGRSSEQQQQLQNPETRVQRPADDRLFTWAAVGLTXXXXXXXXXXXXX 344
               +  + ++ A  SS+Q   L  PETRVQRPADDRLFTWAAVGLT             
Sbjct: 239 GATGVRTSTEIPARASSDQL--LHRPETRVQRPADDRLFTWAAVGLTIAIVVLLLKKFLK 296

Query: 345 XSEYGAVFMDG 377
            S +GAVFMDG
Sbjct: 297 SSGHGAVFMDG 307


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