BLASTX nr result

ID: Panax21_contig00019385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019385
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280983.1| PREDICTED: transmembrane protein 189 [Vitis ...   369   e-100
ref|XP_002319304.1| predicted protein [Populus trichocarpa] gi|2...   369   e-100
ref|XP_002522972.1| ubiquitin-conjugating enzyme variant, putati...   361   2e-97
ref|XP_003551889.1| PREDICTED: transmembrane protein 189-like [G...   357   4e-96
ref|XP_003530742.1| PREDICTED: transmembrane protein 189-like [G...   355   2e-95

>ref|XP_002280983.1| PREDICTED: transmembrane protein 189 [Vitis vinifera]
          Length = 307

 Score =  369 bits (948), Expect = e-100
 Identities = 180/301 (59%), Positives = 209/301 (69%), Gaps = 5/301 (1%)
 Frame = +3

Query: 57  PHYQHNVHHRRQLSRRRHVPHFPRSISCSLXXXXXXXXXX-----KPSPINELPLRQLLN 221
           PH+++          RRH   FP  + CS                +P P+   P+ +   
Sbjct: 6   PHHKYYSLRSPNNVGRRHHRRFPALVHCSATSTAKAKHKADQLVIEPRPLTPTPIAK--- 62

Query: 222 SEVHSSSMPRIKPPTTDLQSTWSHRAWLASGCTTILVSLAKSITGAATCHIWLEPXXXXX 401
               +   P IK P  DL STW HRAW+ASGCTT+L+SL K  TG+A  H+WLEP     
Sbjct: 63  ----TPDRPSIKDP--DLLSTWPHRAWVASGCTTVLISLLKCATGSAHSHMWLEPVLAGL 116

Query: 402 XXXXXXXXXSGVYHWGIDNYGDASTPIFGSQIEGFQGHHKWPRTITRRELANNLHALARA 581
                    SGVYHWGIDNYGDASTP+FGSQIE FQGHHKWP TI RR+ ANNLHALARA
Sbjct: 117 IGYVLADLGSGVYHWGIDNYGDASTPVFGSQIEAFQGHHKWPWTIIRRQFANNLHALARA 176

Query: 582 VTLVVLPVDLICQDPVLLGFTGACSGCIMLSQQFHAWAHGTKSKLPPVVVALQDAGVLVS 761
           VT  VLP+DL+  DPV+ GF   CSGCIM SQQFHAWAHGTKS+LPP+VVALQDAG+LVS
Sbjct: 177 VTFTVLPLDLVFNDPVVHGFVWVCSGCIMFSQQFHAWAHGTKSRLPPLVVALQDAGLLVS 236

Query: 762 RSQHAAHHRQPYNNNYCIVSGVWNEWLDQHKVFEILEMVFFFKLGVRPRSWSDPNHEWSE 941
           RSQHAAHH  PYNNNYCIVSGVWNE+LD++KVFE LEM+ FF+LGVRPRSWS+PN  W E
Sbjct: 237 RSQHAAHHHAPYNNNYCIVSGVWNEFLDENKVFEALEMILFFQLGVRPRSWSEPNFGWIE 296

Query: 942 D 944
           +
Sbjct: 297 E 297


>ref|XP_002319304.1| predicted protein [Populus trichocarpa] gi|222857680|gb|EEE95227.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  369 bits (947), Expect = e-100
 Identities = 185/304 (60%), Positives = 210/304 (69%), Gaps = 4/304 (1%)
 Frame = +3

Query: 45  MSILPHYQHNVHHRRQLSRRRHVPHFPRSISCSLXXXXXXXXXXKPSPINELPLRQLL-- 218
           MSILP + H +          H P   + I CS           K SP N+L        
Sbjct: 1   MSILPQHNHCLTRSPA-----HNPWHRKRIICSATTTPTKP---KSSP-NQLTFEPQFVT 51

Query: 219 --NSEVHSSSMPRIKPPTTDLQSTWSHRAWLASGCTTILVSLAKSITGAATCHIWLEPXX 392
             N     S+ P +  P+  LQSTWSHR W+A+GCTT+LVSLAK+I GA   HIWLEP  
Sbjct: 52  PPNLVTSISTPPVLNDPS--LQSTWSHRTWVATGCTTVLVSLAKAIAGAGHSHIWLEPML 109

Query: 393 XXXXXXXXXXXXSGVYHWGIDNYGDASTPIFGSQIEGFQGHHKWPRTITRRELANNLHAL 572
                       SGVYHWGIDNYGD STPIFG+QIE FQGHHKWP TITRR+ ANNLHAL
Sbjct: 110 AGYIGYILADLGSGVYHWGIDNYGDGSTPIFGNQIEAFQGHHKWPWTITRRQFANNLHAL 169

Query: 573 ARAVTLVVLPVDLICQDPVLLGFTGACSGCIMLSQQFHAWAHGTKSKLPPVVVALQDAGV 752
           AR V   VLPVDL+C DP +  F G CSGCIM SQQFHAWAHGTKSKLPP+VVALQD G+
Sbjct: 170 ARTVAFFVLPVDLVCNDPTVNAFVGVCSGCIMFSQQFHAWAHGTKSKLPPIVVALQDVGL 229

Query: 753 LVSRSQHAAHHRQPYNNNYCIVSGVWNEWLDQHKVFEILEMVFFFKLGVRPRSWSDPNHE 932
           LVSRSQH AHHRQPYNNNYCIVSGVWNE+LD++KVFE LEM  +FKLGVRPRSWS+P  +
Sbjct: 230 LVSRSQHGAHHRQPYNNNYCIVSGVWNEFLDKNKVFEALEMALYFKLGVRPRSWSEPTTD 289

Query: 933 WSED 944
           W+E+
Sbjct: 290 WTEE 293


>ref|XP_002522972.1| ubiquitin-conjugating enzyme variant, putative [Ricinus communis]
           gi|223537784|gb|EEF39402.1| ubiquitin-conjugating enzyme
           variant, putative [Ricinus communis]
          Length = 297

 Score =  361 bits (926), Expect = 2e-97
 Identities = 179/302 (59%), Positives = 209/302 (69%), Gaps = 2/302 (0%)
 Frame = +3

Query: 45  MSILPHYQHNVHHRRQLSRRRHVPHFPRSISCSLXXXXXXXXXXKPSPINELPLRQLLNS 224
           MSILPH++            R   H P S    +          KP P  E     ++N 
Sbjct: 1   MSILPHHE---------CLTRSPVHVPSSHRIRVICSATITTKSKPKPTIE----PVVNP 47

Query: 225 EVHSSSMPRIKPPTTDL--QSTWSHRAWLASGCTTILVSLAKSITGAATCHIWLEPXXXX 398
           +  +   P + P   DL  QSTWSHR W+A+GCTT+L+SLAK+I  AA  HIWL+P    
Sbjct: 48  Q--NLVKPVVSPVLNDLSLQSTWSHRIWVATGCTTVLISLAKAILAAADSHIWLQPMLAG 105

Query: 399 XXXXXXXXXXSGVYHWGIDNYGDASTPIFGSQIEGFQGHHKWPRTITRRELANNLHALAR 578
                     SGVYHWGIDNYGDASTPI G+QI+ FQGHHKWP TITRR+ ANNLHALAR
Sbjct: 106 YVGYILADLGSGVYHWGIDNYGDASTPIVGTQIDAFQGHHKWPWTITRRQFANNLHALAR 165

Query: 579 AVTLVVLPVDLICQDPVLLGFTGACSGCIMLSQQFHAWAHGTKSKLPPVVVALQDAGVLV 758
           AV   VLP+DL+C DPV+ GF   CS CIM SQQFHAWAHGTKSKLPP+VVALQDAG+LV
Sbjct: 166 AVAFFVLPIDLLCNDPVIHGFVSVCSVCIMFSQQFHAWAHGTKSKLPPLVVALQDAGLLV 225

Query: 759 SRSQHAAHHRQPYNNNYCIVSGVWNEWLDQHKVFEILEMVFFFKLGVRPRSWSDPNHEWS 938
           SR+QHAAHHR PYNNNYCIVSGVWNE+LD+ KVFE LEM  FF+ GVRPRSWS+P  +W+
Sbjct: 226 SRTQHAAHHRPPYNNNYCIVSGVWNEFLDKQKVFEALEMALFFQHGVRPRSWSEPTSDWT 285

Query: 939 ED 944
           E+
Sbjct: 286 EE 287


>ref|XP_003551889.1| PREDICTED: transmembrane protein 189-like [Glycine max]
          Length = 309

 Score =  357 bits (915), Expect = 4e-96
 Identities = 170/281 (60%), Positives = 198/281 (70%)
 Frame = +3

Query: 102 RRHVPHFPRSISCSLXXXXXXXXXXKPSPINELPLRQLLNSEVHSSSMPRIKPPTTDLQS 281
           + H PH P S                P P+   P    +   V ++  PR       LQS
Sbjct: 19  KNHPPHHPSSPVFCSTTTTTSRDKPNPKPLVIEPWLVPVPPTVVTADNPRPMNNDPSLQS 78

Query: 282 TWSHRAWLASGCTTILVSLAKSITGAATCHIWLEPXXXXXXXXXXXXXXSGVYHWGIDNY 461
           TWSHRAW+A+GCTT+L+SL +SI GA   ++W EP              SGVYHW IDNY
Sbjct: 79  TWSHRAWVAAGCTTLLISLGESIKGAMDLNMWAEPILAGWVGYILADLGSGVYHWAIDNY 138

Query: 462 GDASTPIFGSQIEGFQGHHKWPRTITRRELANNLHALARAVTLVVLPVDLICQDPVLLGF 641
           GDAS PI G+QIE FQGHHKWP TIT+R+ ANNLHALARAVT  VLP+ L+C DP++ GF
Sbjct: 139 GDASIPIVGTQIEAFQGHHKWPWTITKRQFANNLHALARAVTFTVLPIVLLCHDPIVEGF 198

Query: 642 TGACSGCIMLSQQFHAWAHGTKSKLPPVVVALQDAGVLVSRSQHAAHHRQPYNNNYCIVS 821
            G CSGCIM SQQFHAW+HGTKS+LPP+VVALQ+AGVLVSRSQHAAHHR PYNNNYCIVS
Sbjct: 199 VGMCSGCIMFSQQFHAWSHGTKSRLPPLVVALQEAGVLVSRSQHAAHHRPPYNNNYCIVS 258

Query: 822 GVWNEWLDQHKVFEILEMVFFFKLGVRPRSWSDPNHEWSED 944
           GVWNE+LD+HKVFE LEMV +FK GVRPRSWS+   EW E+
Sbjct: 259 GVWNEFLDKHKVFEALEMVLYFKTGVRPRSWSETASEWIEE 299


>ref|XP_003530742.1| PREDICTED: transmembrane protein 189-like [Glycine max]
          Length = 315

 Score =  355 bits (910), Expect = 2e-95
 Identities = 173/303 (57%), Positives = 210/303 (69%), Gaps = 9/303 (2%)
 Frame = +3

Query: 63  YQHNVHHRRQLSRRRHVPHFPRSISCSLXXXXXXXXXXKPSPINEL---------PLRQL 215
           Y  N HH+     + H P  P  + CS           K +  + +         P+  +
Sbjct: 9   YTPNFHHQ---VCKNHPPRHPSRVHCSTTTTTTTTSRSKSNAKSLVIETRLVPVPPMPTV 65

Query: 216 LNSEVHSSSMPRIKPPTTDLQSTWSHRAWLASGCTTILVSLAKSITGAATCHIWLEPXXX 395
           + +E+H    P    P+  LQSTWSHRAW+A+GC+T+++SL +SI GA   ++W+EP   
Sbjct: 66  VTTEIHR---PMNNDPS--LQSTWSHRAWVAAGCSTLVISLGESIKGAIDLNMWVEPIVA 120

Query: 396 XXXXXXXXXXXSGVYHWGIDNYGDASTPIFGSQIEGFQGHHKWPRTITRRELANNLHALA 575
                      SGVYHW IDNYGD STPI G+QIE FQGHHKWP TITRR+ ANNLHALA
Sbjct: 121 GWVGYILADLGSGVYHWAIDNYGDGSTPIVGAQIEAFQGHHKWPWTITRRQFANNLHALA 180

Query: 576 RAVTLVVLPVDLICQDPVLLGFTGACSGCIMLSQQFHAWAHGTKSKLPPVVVALQDAGVL 755
           RAVTL VLPV L+C DP++ GF   CSGCIM SQQFHAW+HGTKS+LPP+VVALQ+AGVL
Sbjct: 181 RAVTLAVLPVVLLCHDPIVEGFVVVCSGCIMFSQQFHAWSHGTKSRLPPLVVALQEAGVL 240

Query: 756 VSRSQHAAHHRQPYNNNYCIVSGVWNEWLDQHKVFEILEMVFFFKLGVRPRSWSDPNHEW 935
           VSR QHAAHHR PYNNNYCIVSGVWNE+LD+HKVFE +EMV +FK GVRPRSWS+P  EW
Sbjct: 241 VSRWQHAAHHRAPYNNNYCIVSGVWNEFLDKHKVFEAMEMVLYFKTGVRPRSWSEPAPEW 300

Query: 936 SED 944
            E+
Sbjct: 301 VEE 303


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