BLASTX nr result

ID: Panax21_contig00019383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019383
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16158.3| unnamed protein product [Vitis vinifera]              442   e-122
ref|XP_002284077.1| PREDICTED: inner membrane protein PPF-1, chl...   442   e-122
ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast pr...   425   e-116
ref|XP_002298365.1| inner membrane protein [Populus trichocarpa]...   422   e-116
gb|ABU75304.1| chloroplast PPF-1 [Citrus trifoliata]                  416   e-114

>emb|CBI16158.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  442 bits (1137), Expect = e-122
 Identities = 220/266 (82%), Positives = 237/266 (89%), Gaps = 2/266 (0%)
 Frame = -3

Query: 1141 ERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 962
            ERIQLETSRLYKQAGVNPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG
Sbjct: 174  ERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 233

Query: 961  PTTIAARQSGSGVSWLIPFVDGHPPLGWHDTAAYXXXXXXXXVSQFVSMELMKPPQTDDP 782
            PTTIAARQSGSG+SWLIPFVDGHPPLGW DTAAY        +SQ+VSMELMKPPQTDDP
Sbjct: 234  PTTIAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMELMKPPQTDDP 293

Query: 781  SQKNSLLVLKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPAVGENAS 602
            SQKN+LLV KFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKP V E+AS
Sbjct: 294  SQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNEDAS 353

Query: 601  GIISAGRAKRSASLPTQSGDRFRQLKQEEKNKKASKALPAEQVEISASTSDSEVDSNEET 422
            GII+AGRAKRSAS P ++GDRFRQLK+EEK KK SKALPAE+++  AS SDS+  S+EET
Sbjct: 354  GIITAGRAKRSASQPARAGDRFRQLKEEEKKKKISKALPAEEIQALASESDSDEGSDEET 413

Query: 421  KD--NDVLEEAFASSSGKPVPDYSGP 350
            KD  +DVLEEA+ SS  K VP Y+GP
Sbjct: 414  KDKGDDVLEEAYVSSGSKQVPQYAGP 439


>ref|XP_002284077.1| PREDICTED: inner membrane protein PPF-1, chloroplastic isoform 1
            [Vitis vinifera]
          Length = 455

 Score =  442 bits (1137), Expect = e-122
 Identities = 220/266 (82%), Positives = 237/266 (89%), Gaps = 2/266 (0%)
 Frame = -3

Query: 1141 ERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 962
            ERIQLETSRLYKQAGVNPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG
Sbjct: 178  ERIQLETSRLYKQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 237

Query: 961  PTTIAARQSGSGVSWLIPFVDGHPPLGWHDTAAYXXXXXXXXVSQFVSMELMKPPQTDDP 782
            PTTIAARQSGSG+SWLIPFVDGHPPLGW DTAAY        +SQ+VSMELMKPPQTDDP
Sbjct: 238  PTTIAARQSGSGISWLIPFVDGHPPLGWQDTAAYLVLPVLLVISQYVSMELMKPPQTDDP 297

Query: 781  SQKNSLLVLKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPAVGENAS 602
            SQKN+LLV KFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKP V E+AS
Sbjct: 298  SQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNEDAS 357

Query: 601  GIISAGRAKRSASLPTQSGDRFRQLKQEEKNKKASKALPAEQVEISASTSDSEVDSNEET 422
            GII+AGRAKRSAS P ++GDRFRQLK+EEK KK SKALPAE+++  AS SDS+  S+EET
Sbjct: 358  GIITAGRAKRSASQPARAGDRFRQLKEEEKKKKISKALPAEEIQALASESDSDEGSDEET 417

Query: 421  KD--NDVLEEAFASSSGKPVPDYSGP 350
            KD  +DVLEEA+ SS  K VP Y+GP
Sbjct: 418  KDKGDDVLEEAYVSSGSKQVPQYAGP 443


>ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast precursor, putative
            [Ricinus communis] gi|223529022|gb|EEF31010.1| Inner
            membrane protein PPF-1, chloroplast precursor, putative
            [Ricinus communis]
          Length = 449

 Score =  425 bits (1092), Expect = e-116
 Identities = 212/266 (79%), Positives = 231/266 (86%), Gaps = 2/266 (0%)
 Frame = -3

Query: 1141 ERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 962
            ERIQLETSRLY+QAGVNPLAGC PTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG
Sbjct: 172  ERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 231

Query: 961  PTTIAARQSGSGVSWLIPFVDGHPPLGWHDTAAYXXXXXXXXVSQFVSMELMKPPQTDDP 782
            PTTIAARQSGSG+SWL PFVDGHPPLGW+DTAAY        VSQ+VSME+MKPPQTDDP
Sbjct: 232  PTTIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDP 291

Query: 781  SQKNSLLVLKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPAVGENAS 602
            +QKN+LLV KFLPLMIGYFSLSVPSGLSIYWF NNVLSTAQQVWLRKLGGAKP V +NAS
Sbjct: 292  AQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFVNNVLSTAQQVWLRKLGGAKPVVDQNAS 351

Query: 601  GIISAGRAKRSASLPTQSGDRFRQLKQEEKNKKASKALPAEQVEISASTSDSEVDSNEET 422
            GII+AGRAKRSAS P + GDRFRQLK+EEK KK  KALP ++ +   S SDS+ +S+EET
Sbjct: 352  GIITAGRAKRSASQPQRGGDRFRQLKEEEKRKKLGKALPDDEAQALDSASDSDEESDEET 411

Query: 421  --KDNDVLEEAFASSSGKPVPDYSGP 350
              K  +VLEEA+ASSS K VPD S P
Sbjct: 412  KAKGEEVLEEAYASSSSKQVPDISRP 437


>ref|XP_002298365.1| inner membrane protein [Populus trichocarpa]
            gi|222845623|gb|EEE83170.1| inner membrane protein
            [Populus trichocarpa]
          Length = 451

 Score =  422 bits (1085), Expect = e-116
 Identities = 209/266 (78%), Positives = 229/266 (86%), Gaps = 2/266 (0%)
 Frame = -3

Query: 1141 ERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 962
            ERIQLETSRLY+QAGVNPLAGC PTLATIPVWIGLYQALSNVANEG+LTEGFFWIPSLGG
Sbjct: 174  ERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGVLTEGFFWIPSLGG 233

Query: 961  PTTIAARQSGSGVSWLIPFVDGHPPLGWHDTAAYXXXXXXXXVSQFVSMELMKPPQTDDP 782
            PTTIAARQSGSG+SWL PFVDGHPPLGWHDTAAY         SQ+VSME+MKPPQTDDP
Sbjct: 234  PTTIAARQSGSGISWLFPFVDGHPPLGWHDTAAYLVLPVLLIASQYVSMEIMKPPQTDDP 293

Query: 781  SQKNSLLVLKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPAVGENAS 602
            +QKN+LLV KFLP+MIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKP V ENAS
Sbjct: 294  TQKNTLLVFKFLPIMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNENAS 353

Query: 601  GIISAGRAKRSASLPTQSGDRFRQLKQEEKNKKASKALPAEQVEISASTSDSEVDSNEET 422
            GII+AGRAKRSAS P Q GDRF+QLK+++K+K   KALP E V+   S S S+ DS+EET
Sbjct: 354  GIITAGRAKRSASQPGQPGDRFKQLKEQDKSKTLRKALPTEGVQALDSASGSDEDSDEET 413

Query: 421  KD--NDVLEEAFASSSGKPVPDYSGP 350
             D   +VLEE +ASS+ K VPD S P
Sbjct: 414  NDKGEEVLEETYASSASKRVPDISRP 439


>gb|ABU75304.1| chloroplast PPF-1 [Citrus trifoliata]
          Length = 452

 Score =  416 bits (1068), Expect = e-114
 Identities = 211/264 (79%), Positives = 230/264 (87%)
 Frame = -3

Query: 1141 ERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGG 962
            ERIQLETSRLY+QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSL G
Sbjct: 179  ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238

Query: 961  PTTIAARQSGSGVSWLIPFVDGHPPLGWHDTAAYXXXXXXXXVSQFVSMELMKPPQTDDP 782
            PTTIAARQSGSG+SWL+PFVDGHPPLGWHDTAAY        VSQ+ +ME+MKPPQTDDP
Sbjct: 239  PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQY-AMEIMKPPQTDDP 297

Query: 781  SQKNSLLVLKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPAVGENAS 602
            +QKN+LLV KFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKP V ENAS
Sbjct: 298  AQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVTENAS 357

Query: 601  GIISAGRAKRSASLPTQSGDRFRQLKQEEKNKKASKALPAEQVEISASTSDSEVDSNEET 422
             II+AGRAKRS S P+++GDRFRQLK+EEK KK +KALPAE V+   S SDSE +S+ E 
Sbjct: 358  EIITAGRAKRSVSQPSRAGDRFRQLKEEEKGKKLNKALPAEDVQTMNSASDSEGESDGE- 416

Query: 421  KDNDVLEEAFASSSGKPVPDYSGP 350
            K   VLEEA+AS+  K VPD S P
Sbjct: 417  KGQGVLEEAYASNRSKQVPDPSRP 440


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