BLASTX nr result

ID: Panax21_contig00019375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019375
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513552.1| splicing factor 3a, putative [Ricinus commun...   120   2e-25
gb|ADE76861.1| unknown [Picea sitchensis]                             120   3e-25
ref|XP_004145709.1| PREDICTED: splicing factor 3A subunit 3-like...   119   4e-25
ref|NP_001051082.1| Os03g0717600 [Oryza sativa Japonica Group] g...   119   4e-25
gb|ABF98562.1| Splicing factor 3A subunit 3, putative, expressed...   119   4e-25

>ref|XP_002513552.1| splicing factor 3a, putative [Ricinus communis]
           gi|223547460|gb|EEF48955.1| splicing factor 3a, putative
           [Ricinus communis]
          Length = 459

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = -1

Query: 656 NTKNFNEITSIVEAKQLWDRIQERQGVNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 477
           NTKNFNEITSI EAK+LW RIQERQGVNKWRPDLEEEYED+EGNIYNKKTYTDLQRQGLI
Sbjct: 400 NTKNFNEITSIEEAKELWKRIQERQGVNKWRPDLEEEYEDREGNIYNKKTYTDLQRQGLI 459


>gb|ADE76861.1| unknown [Picea sitchensis]
          Length = 507

 Score =  120 bits (300), Expect = 3e-25
 Identities = 56/60 (93%), Positives = 58/60 (96%)
 Frame = -1

Query: 656 NTKNFNEITSIVEAKQLWDRIQERQGVNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 477
           NTKNFNEITSI EAK LW+RIQERQG+NKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI
Sbjct: 448 NTKNFNEITSIKEAKFLWERIQERQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 507


>ref|XP_004145709.1| PREDICTED: splicing factor 3A subunit 3-like [Cucumis sativus]
           gi|449507630|ref|XP_004163087.1| PREDICTED: LOW QUALITY
           PROTEIN: splicing factor 3A subunit 3-like [Cucumis
           sativus]
          Length = 508

 Score =  119 bits (299), Expect = 4e-25
 Identities = 56/60 (93%), Positives = 57/60 (95%)
 Frame = -1

Query: 656 NTKNFNEITSIVEAKQLWDRIQERQGVNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 477
           NTKNFNEITSI EAK LW RIQERQGVNKWRPDLEEEYED+EGNIYNKKTYTDLQRQGLI
Sbjct: 449 NTKNFNEITSIEEAKDLWKRIQERQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 508


>ref|NP_001051082.1| Os03g0717600 [Oryza sativa Japonica Group]
           gi|108710766|gb|ABF98561.1| Splicing factor 3A subunit
           3, putative, expressed [Oryza sativa Japonica Group]
           gi|113549553|dbj|BAF12996.1| Os03g0717600 [Oryza sativa
           Japonica Group] gi|125545519|gb|EAY91658.1| hypothetical
           protein OsI_13297 [Oryza sativa Indica Group]
           gi|125587714|gb|EAZ28378.1| hypothetical protein
           OsJ_12358 [Oryza sativa Japonica Group]
          Length = 507

 Score =  119 bits (299), Expect = 4e-25
 Identities = 54/60 (90%), Positives = 59/60 (98%)
 Frame = -1

Query: 656 NTKNFNEITSIVEAKQLWDRIQERQGVNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 477
           NTKNFNEITSI EAK+LW++IQ+RQG+NKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI
Sbjct: 448 NTKNFNEITSIQEAKELWEKIQQRQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 507


>gb|ABF98562.1| Splicing factor 3A subunit 3, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 378

 Score =  119 bits (299), Expect = 4e-25
 Identities = 54/60 (90%), Positives = 59/60 (98%)
 Frame = -1

Query: 656 NTKNFNEITSIVEAKQLWDRIQERQGVNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 477
           NTKNFNEITSI EAK+LW++IQ+RQG+NKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI
Sbjct: 319 NTKNFNEITSIQEAKELWEKIQQRQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 378


Top