BLASTX nr result
ID: Panax21_contig00019375
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00019375 (656 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513552.1| splicing factor 3a, putative [Ricinus commun... 120 2e-25 gb|ADE76861.1| unknown [Picea sitchensis] 120 3e-25 ref|XP_004145709.1| PREDICTED: splicing factor 3A subunit 3-like... 119 4e-25 ref|NP_001051082.1| Os03g0717600 [Oryza sativa Japonica Group] g... 119 4e-25 gb|ABF98562.1| Splicing factor 3A subunit 3, putative, expressed... 119 4e-25 >ref|XP_002513552.1| splicing factor 3a, putative [Ricinus communis] gi|223547460|gb|EEF48955.1| splicing factor 3a, putative [Ricinus communis] Length = 459 Score = 120 bits (301), Expect = 2e-25 Identities = 56/60 (93%), Positives = 58/60 (96%) Frame = -1 Query: 656 NTKNFNEITSIVEAKQLWDRIQERQGVNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 477 NTKNFNEITSI EAK+LW RIQERQGVNKWRPDLEEEYED+EGNIYNKKTYTDLQRQGLI Sbjct: 400 NTKNFNEITSIEEAKELWKRIQERQGVNKWRPDLEEEYEDREGNIYNKKTYTDLQRQGLI 459 >gb|ADE76861.1| unknown [Picea sitchensis] Length = 507 Score = 120 bits (300), Expect = 3e-25 Identities = 56/60 (93%), Positives = 58/60 (96%) Frame = -1 Query: 656 NTKNFNEITSIVEAKQLWDRIQERQGVNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 477 NTKNFNEITSI EAK LW+RIQERQG+NKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI Sbjct: 448 NTKNFNEITSIKEAKFLWERIQERQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 507 >ref|XP_004145709.1| PREDICTED: splicing factor 3A subunit 3-like [Cucumis sativus] gi|449507630|ref|XP_004163087.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3A subunit 3-like [Cucumis sativus] Length = 508 Score = 119 bits (299), Expect = 4e-25 Identities = 56/60 (93%), Positives = 57/60 (95%) Frame = -1 Query: 656 NTKNFNEITSIVEAKQLWDRIQERQGVNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 477 NTKNFNEITSI EAK LW RIQERQGVNKWRPDLEEEYED+EGNIYNKKTYTDLQRQGLI Sbjct: 449 NTKNFNEITSIEEAKDLWKRIQERQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 508 >ref|NP_001051082.1| Os03g0717600 [Oryza sativa Japonica Group] gi|108710766|gb|ABF98561.1| Splicing factor 3A subunit 3, putative, expressed [Oryza sativa Japonica Group] gi|113549553|dbj|BAF12996.1| Os03g0717600 [Oryza sativa Japonica Group] gi|125545519|gb|EAY91658.1| hypothetical protein OsI_13297 [Oryza sativa Indica Group] gi|125587714|gb|EAZ28378.1| hypothetical protein OsJ_12358 [Oryza sativa Japonica Group] Length = 507 Score = 119 bits (299), Expect = 4e-25 Identities = 54/60 (90%), Positives = 59/60 (98%) Frame = -1 Query: 656 NTKNFNEITSIVEAKQLWDRIQERQGVNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 477 NTKNFNEITSI EAK+LW++IQ+RQG+NKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI Sbjct: 448 NTKNFNEITSIQEAKELWEKIQQRQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 507 >gb|ABF98562.1| Splicing factor 3A subunit 3, putative, expressed [Oryza sativa Japonica Group] Length = 378 Score = 119 bits (299), Expect = 4e-25 Identities = 54/60 (90%), Positives = 59/60 (98%) Frame = -1 Query: 656 NTKNFNEITSIVEAKQLWDRIQERQGVNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 477 NTKNFNEITSI EAK+LW++IQ+RQG+NKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI Sbjct: 319 NTKNFNEITSIQEAKELWEKIQQRQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 378