BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019373
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   280   2e-73
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   280   4e-73
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   278   9e-73
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   274   2e-71
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   272   6e-71

>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  280 bits (717), Expect = 2e-73
 Identities = 137/285 (48%), Positives = 193/285 (67%)
 Frame = -3

Query: 866  KQGCLLRGTNSTAIALVPKVLNPSSMNDYRPISCCNTTYKCISKIIAVRLKGVLPSLISP 687
            + G LL+  N+T + L+PK+ N S M D+RPISC NT YK I+K++  RLK +L  +ISP
Sbjct: 496  RSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISP 555

Query: 686  SQSAFVPGRRIGDNILLAQELFRNYHRPSGQSRCAMKIDLRKAFDSVSWNFVLAALRLLK 507
            SQSAF+PGR + +N+LLA E+   Y+  +  SR  +K+DLRKAFDSV W+F+++A R L 
Sbjct: 556  SQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALA 615

Query: 506  FPPKFIYWIKACICSPSFSVKVNGALCGYFKGTKGLRQGDPLSPFLFVIAMEVLSLIFSK 327
             P KF+ WI  CI +P FSV VNG+  G+FK  KGLRQGDPLSP+LFV+AMEV S +   
Sbjct: 616  VPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKA 675

Query: 326  ETRASYFKHHWKTKSISLTHLCFADDLFIFCHGDVNSAKVIKLCLDHFSSISGLHVNDSK 147
               A Y ++H KT  +S++HL FADD+ +F  G  +S   I   LD F+S SGLHVN  K
Sbjct: 676  RFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKDK 735

Query: 146  SMCFLSNVSPVQAEVIINTLGFQVGRFPAKFLGVPLITSKLSLAD 12
            +  +L+    V+A + I+  GF +   P ++LG+PL++ KL +++
Sbjct: 736  TNLYLAGTDEVEA-LAISHYGFPISTLPIRYLGLPLMSRKLKISE 779


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  280 bits (715), Expect = 4e-73
 Identities = 137/285 (48%), Positives = 192/285 (67%)
 Frame = -3

Query: 866  KQGCLLRGTNSTAIALVPKVLNPSSMNDYRPISCCNTTYKCISKIIAVRLKGVLPSLISP 687
            + G LL+  N+T + L+PK+ N S M D+RPISC NT YK I+K++  RLK +L  +ISP
Sbjct: 496  RSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISP 555

Query: 686  SQSAFVPGRRIGDNILLAQELFRNYHRPSGQSRCAMKIDLRKAFDSVSWNFVLAALRLLK 507
            SQSAF+PGR + +N+LLA E+   Y+  +  SR  +K+DLRKAFDSV W+F+++A R L 
Sbjct: 556  SQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALA 615

Query: 506  FPPKFIYWIKACICSPSFSVKVNGALCGYFKGTKGLRQGDPLSPFLFVIAMEVLSLIFSK 327
             P KF+ WI  CI +P FSV VNG+  G+FK  KGLRQGDPLSP+LFV+AMEV S +   
Sbjct: 616  VPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKA 675

Query: 326  ETRASYFKHHWKTKSISLTHLCFADDLFIFCHGDVNSAKVIKLCLDHFSSISGLHVNDSK 147
               A Y  +H KT  +S++HL FADD+ +F  G  +S   I   LD F+S SGLHVN  K
Sbjct: 676  RFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKDK 735

Query: 146  SMCFLSNVSPVQAEVIINTLGFQVGRFPAKFLGVPLITSKLSLAD 12
            +  +L+    V+A + I+  GF +   P ++LG+PL++ KL +++
Sbjct: 736  TNLYLAGTDEVEA-LAISHYGFPISTLPIRYLGLPLMSRKLKISE 779


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  278 bits (712), Expect = 9e-73
 Identities = 140/287 (48%), Positives = 189/287 (65%)
 Frame = -3

Query: 863  QGCLLRGTNSTAIALVPKVLNPSSMNDYRPISCCNTTYKCISKIIAVRLKGVLPSLISPS 684
            +G L +G NST +AL+PK      M DYRPISCCN  YK ISKIIA RLK VLP  I+ +
Sbjct: 502  KGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGN 561

Query: 683  QSAFVPGRRIGDNILLAQELFRNYHRPSGQSRCAMKIDLRKAFDSVSWNFVLAALRLLKF 504
            QSAFV  R + +N+LLA EL ++YH+ +  +RCA+KID+ KAFDSV W F++    +L F
Sbjct: 562  QSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGF 621

Query: 503  PPKFIYWIKACICSPSFSVKVNGALCGYFKGTKGLRQGDPLSPFLFVIAMEVLSLIFSKE 324
            P +FI+WI  CI + SFSV+VNG L GYF+ ++GLRQG  LSP+LFVI M+VLS +  K 
Sbjct: 622  PREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKA 681

Query: 323  TRASYFKHHWKTKSISLTHLCFADDLFIFCHGDVNSAKVIKLCLDHFSSISGLHVNDSKS 144
              A +F +H K K++ LTHL FADDL +   G + S + I    D F+  SGL ++  KS
Sbjct: 682  AAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKS 741

Query: 143  MCFLSNVSPVQAEVIINTLGFQVGRFPAKFLGVPLITSKLSLADCHP 3
              +L+ +S      + +   F  G+ P ++LG+PLIT +LS  DC P
Sbjct: 742  TVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLP 788


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  274 bits (701), Expect = 2e-71
 Identities = 140/287 (48%), Positives = 185/287 (64%)
 Frame = -3

Query: 863  QGCLLRGTNSTAIALVPKVLNPSSMNDYRPISCCNTTYKCISKIIAVRLKGVLPSLISPS 684
            +G L +G NST +AL+PK      M DYRPISCCN  YK ISKIIA RLK VLP  I  +
Sbjct: 390  KGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGN 449

Query: 683  QSAFVPGRRIGDNILLAQELFRNYHRPSGQSRCAMKIDLRKAFDSVSWNFVLAALRLLKF 504
            QSAFV  R + +N+LLA E+ ++YH+ S  SRCA+KID+ KAFDSV W F++  L  + F
Sbjct: 450  QSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNF 509

Query: 503  PPKFIYWIKACICSPSFSVKVNGALCGYFKGTKGLRQGDPLSPFLFVIAMEVLSLIFSKE 324
            PP+F +WI  CI + SFSV+VNG L G F   + LRQG  LSP+LFVI+M+VLS +  K 
Sbjct: 510  PPEFTHWITLCITTASFSVQVNGELAGVFSSARELRQGCSLSPYLFVISMDVLSKMLDKA 569

Query: 323  TRASYFKHHWKTKSISLTHLCFADDLFIFCHGDVNSAKVIKLCLDHFSSISGLHVNDSKS 144
              A  F +H K ++I LTHL FADDL I   G V S   I   L  F+  SGL ++  KS
Sbjct: 570  VGARQFGYHPKCRAIGLTHLSFADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKS 629

Query: 143  MCFLSNVSPVQAEVIINTLGFQVGRFPAKFLGVPLITSKLSLADCHP 3
              +L+ V     + I+    F VG+ P ++LG+PL++ +L+ +DC P
Sbjct: 630  TMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLP 676


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  272 bits (696), Expect = 6e-71
 Identities = 134/287 (46%), Positives = 190/287 (66%)
 Frame = -3

Query: 863  QGCLLRGTNSTAIALVPKVLNPSSMNDYRPISCCNTTYKCISKIIAVRLKGVLPSLISPS 684
            +G L +G NST +AL+PK      + DYRPISCCN  YK ISKI+A RLK +LP  I  +
Sbjct: 223  KGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGN 282

Query: 683  QSAFVPGRRIGDNILLAQELFRNYHRPSGQSRCAMKIDLRKAFDSVSWNFVLAALRLLKF 504
            QSAFV  R + +N+LLA EL ++YH+ S  +RCAMKID+ KAFDS+ W+F+   L  + F
Sbjct: 283  QSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNF 342

Query: 503  PPKFIYWIKACICSPSFSVKVNGALCGYFKGTKGLRQGDPLSPFLFVIAMEVLSLIFSKE 324
            P +FI+WI  C+ + SFS++VNG L GYF+  +GLRQG  LSP+LFVI+M+VLS +  K 
Sbjct: 343  PGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKA 402

Query: 323  TRASYFKHHWKTKSISLTHLCFADDLFIFCHGDVNSAKVIKLCLDHFSSISGLHVNDSKS 144
              A  F +H + K++ LTHLCFADDL I   G + S   I   L+ F++  GL +   K+
Sbjct: 403  AGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKT 462

Query: 143  MCFLSNVSPVQAEVIINTLGFQVGRFPAKFLGVPLITSKLSLADCHP 3
              +L+ VS    +++ +   F VG+ P ++LG+PL+T +L+ +D  P
Sbjct: 463  TLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSP 509