BLASTX nr result
ID: Panax21_contig00019372
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00019372
(1877 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like... 448 e-123
emb|CBI39565.3| unnamed protein product [Vitis vinifera] 442 e-121
ref|XP_002512483.1| exonuclease, putative [Ricinus communis] gi|... 394 e-107
ref|XP_003626171.1| DNA polymerase III polC-type [Medicago trunc... 371 e-100
ref|XP_003521673.1| PREDICTED: DNA polymerase III polC-type-like... 367 8e-99
>ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like isoform 2 [Vitis
vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED: DNA
polymerase III polC-type-like isoform 1 [Vitis vinifera]
Length = 337
Score = 448 bits (1152), Expect = e-123
Identities = 213/336 (63%), Positives = 273/336 (81%), Gaps = 1/336 (0%)
Frame = -2
Query: 1570 IRTVAMCFSLLQFPKCRFHTLTSSWWESFHYLGRSGKNSTA-KPFDCNIYGLEGGHTRRW 1394
+RTV MCFS+LQ P+CR HTL S W ESFH LG + ++S++ K + GLEGG++RRW
Sbjct: 1 MRTVPMCFSILQVPRCRIHTLASFWRESFHSLGSTCRSSSSFKLLGSHTNGLEGGNSRRW 60
Query: 1393 TRRPVTTKAEGKSKNVLSSKTRIIGHETADGAVSTSVELNTKRMEISKYERVKDCDIQKK 1214
TRRP+TTK+EG++K SSK I HE DG VSTS +L ++EIS+ +R++ C++Q+K
Sbjct: 61 TRRPITTKSEGRNKYTQSSKRSNIRHEIVDGTVSTSTKLIVDKLEISESQRIQYCEVQEK 120
Query: 1213 IAENRDLARLLTVIIFDMETTGFSRETERIIEIALQDLLGGQNSTFQTLINPERYVPNPH 1034
+ EN+DLA+L+TVI+FD ETTG SR +RIIEI LQDL GG+NSTFQTL+NPER VPNPH
Sbjct: 121 VTENKDLAKLVTVIVFDTETTGLSRANDRIIEIGLQDLGGGENSTFQTLVNPERIVPNPH 180
Query: 1033 IHGISTHMVCRPDVPRMKDLIPILLEYIQSRQKPGGQVLWIGHNARCFDVPFLIKEFSRC 854
+HGI+T+MV RPDVPR KDLIPILL+Y++SRQKPGG +LW+ HN R FDVPFLI EFSRC
Sbjct: 181 VHGITTYMVNRPDVPRWKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRC 240
Query: 853 SVDVPENWLFMDTLPLARELVKSGGSNLPSKTSLQALREHYKIPLVGSAHRAMSDVYSLS 674
+ +VP NW F+DTLPLAREL+KS GS+LP SLQALRE+Y+IPLVG AHR +SDVY+LS
Sbjct: 241 NTEVPPNWRFLDTLPLARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLS 300
Query: 673 QILQRMTFDLKVPISGLVERSFRASDLNDLKKKKKT 566
Q+LQ +TF+LKV ++ L++RSF ASD+ + KKKK +
Sbjct: 301 QVLQMLTFNLKVSVANLLDRSFTASDIINPKKKKNS 336
>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 442 bits (1138), Expect = e-121
Identities = 210/331 (63%), Positives = 269/331 (81%), Gaps = 1/331 (0%)
Frame = -2
Query: 1555 MCFSLLQFPKCRFHTLTSSWWESFHYLGRSGKNSTA-KPFDCNIYGLEGGHTRRWTRRPV 1379
MCFS+LQ P+CR HTL S W ESFH LG + ++S++ K + GLEGG++RRWTRRP+
Sbjct: 1 MCFSILQVPRCRIHTLASFWRESFHSLGSTCRSSSSFKLLGSHTNGLEGGNSRRWTRRPI 60
Query: 1378 TTKAEGKSKNVLSSKTRIIGHETADGAVSTSVELNTKRMEISKYERVKDCDIQKKIAENR 1199
TTK+EG++K SSK I HE DG VSTS +L ++EIS+ +R++ C++Q+K+ EN+
Sbjct: 61 TTKSEGRNKYTQSSKRSNIRHEIVDGTVSTSTKLIVDKLEISESQRIQYCEVQEKVTENK 120
Query: 1198 DLARLLTVIIFDMETTGFSRETERIIEIALQDLLGGQNSTFQTLINPERYVPNPHIHGIS 1019
DLA+L+TVI+FD ETTG SR +RIIEI LQDL GG+NSTFQTL+NPER VPNPH+HGI+
Sbjct: 121 DLAKLVTVIVFDTETTGLSRANDRIIEIGLQDLGGGENSTFQTLVNPERIVPNPHVHGIT 180
Query: 1018 THMVCRPDVPRMKDLIPILLEYIQSRQKPGGQVLWIGHNARCFDVPFLIKEFSRCSVDVP 839
T+MV RPDVPR KDLIPILL+Y++SRQKPGG +LW+ HN R FDVPFLI EFSRC+ +VP
Sbjct: 181 TYMVNRPDVPRWKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVP 240
Query: 838 ENWLFMDTLPLARELVKSGGSNLPSKTSLQALREHYKIPLVGSAHRAMSDVYSLSQILQR 659
NW F+DTLPLAREL+KS GS+LP SLQALRE+Y+IPLVG AHR +SDVY+LSQ+LQ
Sbjct: 241 PNWRFLDTLPLARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQM 300
Query: 658 MTFDLKVPISGLVERSFRASDLNDLKKKKKT 566
+TF+LKV ++ L++RSF ASD+ + KKKK +
Sbjct: 301 LTFNLKVSVANLLDRSFTASDIINPKKKKNS 331
>ref|XP_002512483.1| exonuclease, putative [Ricinus communis] gi|223548444|gb|EEF49935.1|
exonuclease, putative [Ricinus communis]
Length = 334
Score = 394 bits (1012), Expect = e-107
Identities = 203/335 (60%), Positives = 249/335 (74%), Gaps = 2/335 (0%)
Frame = -2
Query: 1570 IRTVAMCFSLLQFPKCRFHTLTSSWWESFHYLGRS-GKNSTAKPFDCNIYGLEGGHTRRW 1394
+R + MCFS+LQ P+CR HT+ + W ESFH R G S+ + GLEGG++RRW
Sbjct: 1 MRIIPMCFSILQVPRCRLHTIANFWQESFHSSARKCGNKSSFRLLASKSDGLEGGYSRRW 60
Query: 1393 TRRPVTTKAEGKSK-NVLSSKTRIIGHETADGAVSTSVELNTKRMEISKYERVKDCDIQK 1217
RRPV+TK EG +K SK+ I HE D VSTS L+ + EIS+Y+ ++ CDI++
Sbjct: 61 IRRPVSTKTEGTNKITQYDSKSTNIRHEILDETVSTSATLSISKTEISEYQNIRYCDIRR 120
Query: 1216 KIAENRDLARLLTVIIFDMETTGFSRETERIIEIALQDLLGGQNSTFQTLINPERYVPNP 1037
+I EN DLA+L+TVI+FD+ETTGFSRE ERIIEIALQDL GG+NSTFQTLINP R VPN
Sbjct: 121 EILENNDLAKLVTVIVFDLETTGFSREYERIIEIALQDLHGGENSTFQTLINPGRIVPNS 180
Query: 1036 HIHGISTHMVCRPDVPRMKDLIPILLEYIQSRQKPGGQVLWIGHNARCFDVPFLIKEFSR 857
HIHGI+THMVC+P VPRM+DLIPILL+YI+SRQKPGG VL + HN R FDVPFLI EF R
Sbjct: 181 HIHGITTHMVCKPHVPRMEDLIPILLQYIRSRQKPGGYVLLVAHNGRSFDVPFLINEFKR 240
Query: 856 CSVDVPENWLFMDTLPLARELVKSGGSNLPSKTSLQALREHYKIPLVGSAHRAMSDVYSL 677
VDVP NWLFMDTLPLAR+ +KS G + S SLQ LRE + I L GSAHRAMSDV L
Sbjct: 241 SGVDVPCNWLFMDTLPLARKWMKSKGLKISS--SLQGLREAFGIKLEGSAHRAMSDVRLL 298
Query: 676 SQILQRMTFDLKVPISGLVERSFRASDLNDLKKKK 572
+++ Q +TF+LK + LV SF AS+L ++KKKK
Sbjct: 299 AKLFQMLTFNLKTTLPSLVAESFTASELINVKKKK 333
>ref|XP_003626171.1| DNA polymerase III polC-type [Medicago truncatula]
gi|355501186|gb|AES82389.1| DNA polymerase III polC-type
[Medicago truncatula]
Length = 332
Score = 371 bits (952), Expect = e-100
Identities = 181/336 (53%), Positives = 246/336 (73%), Gaps = 1/336 (0%)
Frame = -2
Query: 1570 IRTVAMCFSLLQFPKCRFHTLTSSWWESFHYLGR-SGKNSTAKPFDCNIYGLEGGHTRRW 1394
++T +M FS LQ P+CR H+L ++ ++FH NS+ + IYGL+GGH ++W
Sbjct: 1 MKTGSMIFSFLQVPRCRLHSLANNCGQTFHSFSNICENNSSVRLLGSRIYGLQGGHRKKW 60
Query: 1393 TRRPVTTKAEGKSKNVLSSKTRIIGHETADGAVSTSVELNTKRMEISKYERVKDCDIQKK 1214
TRRP+TT EG + +K+R E +STS +N K+ ++ ++ ++ CDI ++
Sbjct: 61 TRRPITTNTEGSA----GTKSRSTKQEILSETISTSSTVNVKKTQLGQFPEIQYCDIHQE 116
Query: 1213 IAENRDLARLLTVIIFDMETTGFSRETERIIEIALQDLLGGQNSTFQTLINPERYVPNPH 1034
IA+N+DL+ L+TVI+FD+ETTGFSRE ERIIEIAL+DL GG NSTFQT +NP+R V N H
Sbjct: 117 IAQNKDLSSLVTVIVFDIETTGFSRENERIIEIALRDLQGGPNSTFQTFVNPQRSVYNSH 176
Query: 1033 IHGISTHMVCRPDVPRMKDLIPILLEYIQSRQKPGGQVLWIGHNARCFDVPFLIKEFSRC 854
IHGI+T MV RP VPRM+DL+PIL Y++SR+KP G VLW+GHNAR FDVPF+I EF RC
Sbjct: 177 IHGITTQMVSRPGVPRMEDLVPILFHYVKSREKPRGYVLWVGHNARVFDVPFIINEFRRC 236
Query: 853 SVDVPENWLFMDTLPLARELVKSGGSNLPSKTSLQALREHYKIPLVGSAHRAMSDVYSLS 674
S +P NWLF+DTLPLAR+L+KS G+ LPS SL +LR+ Y+I + G AHRAM DV +LS
Sbjct: 237 STQIPPNWLFVDTLPLARQLMKSEGTKLPS-VSLDSLRKFYEIKVDGPAHRAMEDVNTLS 295
Query: 673 QILQRMTFDLKVPISGLVERSFRASDLNDLKKKKKT 566
IL ++T DLK+ +SGLVE+SF +D+ + KKKK +
Sbjct: 296 LILPKLTCDLKLTLSGLVEKSFTEADIINSKKKKNS 331
>ref|XP_003521673.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
Length = 329
Score = 367 bits (941), Expect = 8e-99
Identities = 185/335 (55%), Positives = 247/335 (73%), Gaps = 1/335 (0%)
Frame = -2
Query: 1570 IRTVAMCFSLLQFPKCRFHTLTSSWWESFHYLGRS-GKNSTAKPFDCNIYGLEGGHTRRW 1394
++T +M FSL P+CR +L + W E+FH + G NS+ + IYGL+GG ++W
Sbjct: 1 MKTGSMIFSLFHVPRCRIQSLANCWGETFHGFSTTCGNNSSIRLLGSRIYGLQGGQRKKW 60
Query: 1393 TRRPVTTKAEGKSKNVLSSKTRIIGHETADGAVSTSVELNTKRMEISKYERVKDCDIQKK 1214
TR P+TT EGK S+K++ I HE + + N + ++ + + ++DCDIQ++
Sbjct: 61 TR-PITTNTEGKG----STKSKSIKHEILSETILANATANVNKTQLDQSQEIQDCDIQQE 115
Query: 1213 IAENRDLARLLTVIIFDMETTGFSRETERIIEIALQDLLGGQNSTFQTLINPERYVPNPH 1034
IAEN+DL+ TVI+FD+ETTGFSRE ERIIEIAL+DL GG+NSTFQTL+NP+ VPN H
Sbjct: 116 IAENKDLSSY-TVIVFDIETTGFSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSH 174
Query: 1033 IHGISTHMVCRPDVPRMKDLIPILLEYIQSRQKPGGQVLWIGHNARCFDVPFLIKEFSRC 854
IHGI+T MV +PDVPRM+DLIPIL +Y++SR+KPGG VL++ HNARCFDVPF+I E R
Sbjct: 175 IHGITTQMVNKPDVPRMEDLIPILFQYVRSREKPGGDVLFVAHNARCFDVPFIISELRRY 234
Query: 853 SVDVPENWLFMDTLPLARELVKSGGSNLPSKTSLQALREHYKIPLVGSAHRAMSDVYSLS 674
S+ +P NWLF+DTLPLAREL+KSGG+ L S +SL ALR+ Y I + GSAHRAM DV +LS
Sbjct: 235 SIKIPPNWLFLDTLPLARELMKSGGTTL-SSSSLAALRDLYGIKVDGSAHRAMVDVNTLS 293
Query: 673 QILQRMTFDLKVPISGLVERSFRASDLNDLKKKKK 569
IL R+T DLK+ +S LV++SF SD+ + KKKKK
Sbjct: 294 LILSRLTSDLKLTLSDLVDKSFTESDIINSKKKKK 328