BLASTX nr result

ID: Panax21_contig00019357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00019357
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containin...   226   5e-57
emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]   226   5e-57
ref|XP_002528295.1| transcription factor, putative [Ricinus comm...   225   1e-56
ref|XP_003616654.1| Zinc finger CCCH domain-containing protein [...   219   8e-55
ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containin...   209   9e-52

>ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like [Vitis
            vinifera]
          Length = 689

 Score =  226 bits (576), Expect = 5e-57
 Identities = 143/295 (48%), Positives = 174/295 (58%), Gaps = 22/295 (7%)
 Frame = -3

Query: 820  DMGSLSPMGIGSL-----------------TPPMSPVVACSSPMGGGNLWQNKVNITPPA 692
            DM +LSP+ +GS                  TPPMSP    SSP   G +WQNKVN TPP+
Sbjct: 346  DMATLSPLTLGSSALLLPPTSSSLLLPPTSTPPMSPSAVSSSPKSSG-MWQNKVNFTPPS 404

Query: 691  LQLSGSRLKTALNARDMELELLGLESIHTQKQRQQFIEDLSRLSSPSMWNN--NRFGDMK 518
            LQL GSRLK+AL+ARD+ELEL  LE + +Q   +Q ++++S LSSPS WN   +R G++K
Sbjct: 405  LQLPGSRLKSALSARDLELELELLE-LESQLTHKQLMDEMSSLSSPSCWNKEFSRIGELK 463

Query: 517  PTNLDDVFGSLDSSYLSQLQGLSPRVAT-TANTPQMQSPTAHQMRSQNMNQLRASYPSNI 341
            PTNLDD+FGS D S LSQLQGLS +  T    +PQ+QSPT  QMR QNMNQ RASYP+  
Sbjct: 464  PTNLDDMFGSFDPSVLSQLQGLSLKATTPQLQSPQLQSPTGLQMR-QNMNQQRASYPTKT 522

Query: 340  XXXXXXXXXXXAYGFDXXXXXXXXXXXXXXXAFAKQRSQSFIDRGAVSHHPAGFXXXXXX 161
                       +YGFD               AFAK RSQSFIDRG +SH   GF      
Sbjct: 523  TVTSSPVRKTSSYGFDSSAAVAAAVMNSRSSAFAK-RSQSFIDRGGMSHRSPGF-TAASN 580

Query: 160  XXXXXXXXXXXXXSPNGKLDWGYNGDD--KLKKSASFGFRSSNNSATRNSGMAQS 2
                         SP+GKLDWG  GD+  KLKKSASFGFR++N +    S MA +
Sbjct: 581  SATLMSSNLSDWSSPDGKLDWGIQGDELNKLKKSASFGFRTNNTATATQSMMAST 635


>emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]
          Length = 674

 Score =  226 bits (576), Expect = 5e-57
 Identities = 143/295 (48%), Positives = 174/295 (58%), Gaps = 22/295 (7%)
 Frame = -3

Query: 820  DMGSLSPMGIGSL-----------------TPPMSPVVACSSPMGGGNLWQNKVNITPPA 692
            DM +LSP+ +GS                  TPPMSP    SSP   G +WQNKVN TPP+
Sbjct: 331  DMATLSPLTLGSSALLLPPTSSSLLLPPTSTPPMSPSAVSSSPKSSG-MWQNKVNFTPPS 389

Query: 691  LQLSGSRLKTALNARDMELELLGLESIHTQKQRQQFIEDLSRLSSPSMWNN--NRFGDMK 518
            LQL GSRLK+AL+ARD+ELEL  LE + +Q   +Q ++++S LSSPS WN   +R G++K
Sbjct: 390  LQLPGSRLKSALSARDLELELELLE-LESQLTHKQLMDEMSSLSSPSCWNKEFSRIGELK 448

Query: 517  PTNLDDVFGSLDSSYLSQLQGLSPRVAT-TANTPQMQSPTAHQMRSQNMNQLRASYPSNI 341
            PTNLDD+FGS D S LSQLQGLS +  T    +PQ+QSPT  QMR QNMNQ RASYP+  
Sbjct: 449  PTNLDDMFGSFDPSVLSQLQGLSLKATTPQLQSPQLQSPTGLQMR-QNMNQQRASYPTKT 507

Query: 340  XXXXXXXXXXXAYGFDXXXXXXXXXXXXXXXAFAKQRSQSFIDRGAVSHHPAGFXXXXXX 161
                       +YGFD               AFAK RSQSFIDRG +SH   GF      
Sbjct: 508  TVTSSPVRKTSSYGFDSSAAVAAAVMNSRSSAFAK-RSQSFIDRGGMSHRSPGF-TAASN 565

Query: 160  XXXXXXXXXXXXXSPNGKLDWGYNGDD--KLKKSASFGFRSSNNSATRNSGMAQS 2
                         SP+GKLDWG  GD+  KLKKSASFGFR++N +    S MA +
Sbjct: 566  SATLMSSNLSDWSSPDGKLDWGIQGDELNKLKKSASFGFRTNNTATATQSMMAST 620


>ref|XP_002528295.1| transcription factor, putative [Ricinus communis]
           gi|223532250|gb|EEF34053.1| transcription factor,
           putative [Ricinus communis]
          Length = 346

 Score =  225 bits (573), Expect = 1e-56
 Identities = 143/282 (50%), Positives = 173/282 (61%), Gaps = 14/282 (4%)
 Frame = -3

Query: 820 DMGSLSPMGIGSL--------TPPMSPVVACSSPMGGGNLWQNKVNITPPALQLSGSRLK 665
           DM +LSP+ +GS         TPPMSP+   SS    G LWQNK+N+TPPALQL GSRLK
Sbjct: 13  DMATLSPLALGSSSLALPSVSTPPMSPLATASSSPKSGGLWQNKINLTPPALQLPGSRLK 72

Query: 664 TALNARDMEL--ELLGLESIHTQKQRQQFIEDLSRLSSPSMWNN--NRFGDMKPTNLDDV 497
           TAL ARD+EL  ELL L++   Q Q+QQF++++S LSSPS W+   NR GD+KPTNLDDV
Sbjct: 73  TALCARDLELERELLALDNHSNQLQQQQFMDEMSGLSSPSCWSKDFNRVGDLKPTNLDDV 132

Query: 496 FGSLDSSYLSQLQGLSPRVATTANTPQMQSPTAHQMRSQNMNQLRASYPSNIXXXXXXXX 317
           FGSLD S L+ LQGLS + +T     Q+QSPT  ++R QNMNQ R+SYP+N+        
Sbjct: 133 FGSLDPSLLAPLQGLSFKSSTPT---QLQSPTGLEIR-QNMNQFRSSYPTNL--SSSPVR 186

Query: 316 XXXAYGFDXXXXXXXXXXXXXXXAFAKQRSQSFIDRGAVSHHPAGFXXXXXXXXXXXXXX 137
              AYGFD               AFAK RS SFIDRGA ++                   
Sbjct: 187 KPAAYGFDSSAAVAAAMMNSRSSAFAK-RSHSFIDRGAATNRLG--ITAAANSVSMMSAN 243

Query: 136 XXXXXSPNGKLDWGYNGDD--KLKKSASFGFRSSNNSATRNS 17
                SP+GKLDWG  GD+  KLKKSASFGFRSSNN   R +
Sbjct: 244 LSDWSSPDGKLDWGVQGDELNKLKKSASFGFRSSNNPTMRTN 285


>ref|XP_003616654.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355517989|gb|AES99612.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 668

 Score =  219 bits (557), Expect = 8e-55
 Identities = 142/294 (48%), Positives = 175/294 (59%), Gaps = 22/294 (7%)
 Frame = -3

Query: 820  DMGSLSPMGIGSL--------TPPMSPVVACSSPMGGGNLWQNKVNITPPALQLSGSRLK 665
            DM S+SP+ + S         TPPMSP+   SSP  G N+WQNK+N+TPP+LQL GSRLK
Sbjct: 326  DMTSMSPLSLSSSSLPMSTVSTPPMSPLAGSSSPKSG-NMWQNKLNLTPPSLQLPGSRLK 384

Query: 664  TALNAR--DMELELLGLES---IHTQKQRQQFIEDLSRLSSPSMWNN--NRFGDMKPTNL 506
            +AL+AR  D+E+ELLGL+S      Q+Q+QQ IE+++R+SSPS  N+  NR  D+ PTNL
Sbjct: 385  SALSARDLDLEMELLGLDSPRRQQQQQQQQQLIEEIARISSPSFRNSEFNRIADLNPTNL 444

Query: 505  DDVFGSLDSSYLSQLQGLSPRVATTANTPQMQSPTAHQMR-----SQNMNQLRASYPSNI 341
            DD+  S D + LSQL GLS + +T   T QM SP+A QMR      QNMN LRASYPSN 
Sbjct: 445  DDLLASADPNLLSQLHGLSMQPSTP--TQQMHSPSAMQMRQNMNMGQNMNHLRASYPSN- 501

Query: 340  XXXXXXXXXXXAYGFDXXXXXXXXXXXXXXXAFAKQRSQSFIDRGAVSHHPAGFXXXXXX 161
                        YGFD               AFAKQRSQSFIDRGA +HH          
Sbjct: 502  NMPSSPVRKPSPYGFDSSAAVAAAVMNSRSAAFAKQRSQSFIDRGAATHHLG--LSPPSN 559

Query: 160  XXXXXXXXXXXXXSPNGKLDWGYNGDD--KLKKSASFGFRSSNNSATRNSGMAQ 5
                         SP GKLDWG NGD+  KL+KSASFGFR++  +A   S  A+
Sbjct: 560  PSCRVSSGLSDWGSPTGKLDWGVNGDELNKLRKSASFGFRNNGPAAPTASQHAE 613


>ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
            [Cucumis sativus]
          Length = 683

 Score =  209 bits (531), Expect = 9e-52
 Identities = 142/274 (51%), Positives = 172/274 (62%), Gaps = 15/274 (5%)
 Frame = -3

Query: 820  DMGSLSPMGIGSL--------TPPMSPVVACSSPMGGGNLWQNKVNITPPALQLSGSRLK 665
            DM ++SP+ +GS         TPPMSP+ + SSP  G NLWQNK+N+TPPALQL GSRLK
Sbjct: 354  DMSTMSPLALGSSSLSLPTTSTPPMSPLASVSSPKNG-NLWQNKINLTPPALQLPGSRLK 412

Query: 664  TALNAR--DMELELLGLESIHTQKQ-RQQFIEDLSRLSSPSMWNN--NRFGDMKPTNLDD 500
              L+AR  D+E+ELLGLE   +Q Q +QQ I+++SRLSSP  WN   +R  ++KP+NLDD
Sbjct: 413  ATLSARDLDLEMELLGLEKNVSQLQHQQQLIDEISRLSSP-YWNADVSRTAELKPSNLDD 471

Query: 499  VFGSLDSSYLSQLQGLSPRVATTANTPQMQSPTAHQMRSQNMNQLRASYPSNIXXXXXXX 320
            +FGSLDSS LSQLQG S +   +A   Q+QSPT  QMR QNM+QLRASYP+N        
Sbjct: 472  MFGSLDSSLLSQLQGASLKTPISA---QVQSPTGLQMR-QNMSQLRASYPAN-NLSSSPV 526

Query: 319  XXXXAYGFDXXXXXXXXXXXXXXXAFAKQRSQSFIDRGAVSHHPAGFXXXXXXXXXXXXX 140
                ++GFD               AFAK RSQSFIDR AVS  P GF             
Sbjct: 527  KKPSSFGFDSSSAVAAAVMNSRSAAFAK-RSQSFIDRAAVSRLP-GF-TGAANSAATMSS 583

Query: 139  XXXXXXSPNGKLDWGYNGDD--KLKKSASFGFRS 44
                  SP+GKLDWG NG D  KLKKSASFG R+
Sbjct: 584  HLSDWNSPDGKLDWGMNGTDLNKLKKSASFGIRN 617


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